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PMC:7299399 / 67838-69576 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T317 709-714 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T318 750-754 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T319 764-786 Body_part denotes cell membrane, protein http://purl.org/sig/ont/fma/fma66843
T320 764-777 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T321 764-768 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T322 806-809 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T323 1674-1682 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T200 1436-1444 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T201 1546-1554 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T202 1705-1715 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T571 221-222 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T572 611-619 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T573 661-668 http://purl.obolibrary.org/obo/OBI_0100026 denotes organic
T574 661-668 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organic
T575 750-754 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T576 764-768 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T577 769-777 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T578 872-873 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T579 924-932 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria
T580 1002-1009 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T581 1081-1088 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T582 1136-1144 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria
T583 1155-1162 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T584 1207-1214 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T585 1291-1298 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T586 1452-1453 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T587 1732-1737 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T71341 87-95 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T68630 270-278 Chemical denotes carriers http://purl.obolibrary.org/obo/CHEBI_78059
T46727 375-378 Chemical denotes ROS http://purl.obolibrary.org/obo/CHEBI_26523
T28278 394-404 Chemical denotes superoxide http://purl.obolibrary.org/obo/CHEBI_18421
T67054 405-410 Chemical denotes anion http://purl.obolibrary.org/obo/CHEBI_22563
T5334 412-429 Chemical denotes hydrogen peroxide http://purl.obolibrary.org/obo/CHEBI_16240
T57630 412-420 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T290 421-429 Chemical denotes peroxide http://purl.obolibrary.org/obo/CHEBI_44785
T14780 435-443 Chemical denotes hydroxyl http://purl.obolibrary.org/obo/CHEBI_29191|http://purl.obolibrary.org/obo/CHEBI_43176
T293 444-449 Chemical denotes anion http://purl.obolibrary.org/obo/CHEBI_22563
T55389 455-471 Chemical denotes hydroxyl radical http://purl.obolibrary.org/obo/CHEBI_29191
T65774 455-463 Chemical denotes hydroxyl http://purl.obolibrary.org/obo/CHEBI_43176
T296 464-471 Chemical denotes radical http://purl.obolibrary.org/obo/CHEBI_26519
T28750 494-502 Chemical denotes hydroxyl http://purl.obolibrary.org/obo/CHEBI_29191|http://purl.obolibrary.org/obo/CHEBI_43176
T299 503-511 Chemical denotes radicals http://purl.obolibrary.org/obo/CHEBI_26519
T17652 532-537 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T89852 538-547 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T302 709-714 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T22167 779-786 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T304 806-809 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T79925 826-830 Chemical denotes TiO2 http://purl.obolibrary.org/obo/CHEBI_32234
T49056 950-954 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T17292 1469-1477 Chemical denotes titanium http://purl.obolibrary.org/obo/CHEBI_33341
T63382 1478-1485 Chemical denotes apatite http://purl.obolibrary.org/obo/CHEBI_52254
T82887 1674-1682 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T260 0-252 Sentence denotes The underlying mechanism of this photocatalytic process relies on the excitation of an electron from the valence band (VB) of the photocatalytic material to the conduction band (CB) when exposed to UV light, which leaves a positive hole (h+) in the VB.
T261 253-1022 Sentence denotes The e–/h+ charge carriers migrate to the surface of the photocatalyst and initiate reactions leading to the production of ROS, including the superoxide anion, hydrogen peroxide, the hydroxyl anion, and hydroxyl radical.193 The production of hydroxyl radicals by the oxidation of water molecules on the photocatalysts’ surface accounts for their disinfection activity, owing to their capacity to oxidize many organic constituents of microorganisms, such as lipid peroxidation, leading to damage to cell wall and cell membrane, protein alteration, and/or DNA damage.193 Bare TiO2 exposed to UV light is effective against a broad spectrum of Gram-positive and Gram-negative bacteria, including multi-drug-resistant strains but also against some fungi, viruses, and yeasts.
T262 1023-1500 Sentence denotes As discussed by Bogdan et al., according to some authors, viruses would be more susceptible to inactivation than bacteria.194 Among viruses, some researchers have found that enveloped viruses would be more protected from photocatalytic inactivation than non-enveloped viruses, whereas other authors reported the opposite.194 Only one article reported the usefulness of this inactivation strategy for treatment of SARS-CoV, using a photocatalytic titanium apatite filter (PTAF).
T263 1501-1738 Sentence denotes This filter showed effective inactivation of SARS-CoV when exposed for 6 h to UV light.195 One could also imagine that photocatalysts coupled to UV light could damage spike proteins and lead to decreased infectious capacity of the virus.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1070 1668-1673 Gene denotes spike Gene:43740568
1071 1015-1021 Species denotes yeasts Tax:4932
1072 1436-1444 Species denotes SARS-CoV Tax:694009
1073 1546-1554 Species denotes SARS-CoV Tax:694009
1074 375-378 Chemical denotes ROS MESH:D017382
1075 394-410 Chemical denotes superoxide anion MESH:D013481
1076 412-429 Chemical denotes hydrogen peroxide MESH:D006861
1077 435-449 Chemical denotes hydroxyl anion MESH:C031356
1078 455-471 Chemical denotes hydroxyl radical MESH:D017665
1079 494-511 Chemical denotes hydroxyl radicals MESH:D017665
1080 532-537 Chemical denotes water MESH:D014867
1081 826-830 Chemical denotes TiO2

2_test

Id Subject Object Predicate Lexical cue
32519842-25830789-158615 472-475 25830789 denotes 193
32519842-25830789-158616 817-820 25830789 denotes 193
32519842-26239879-158617 1145-1148 26239879 denotes 194
32519842-26239879-158618 1344-1347 26239879 denotes 194