PMC:7295558 / 1784-3008
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 140-151 | NCBITaxon:11118 | denotes | coronavirus |
T21 | 166-174 | SP_7 | denotes | COVID-19 |
T22 | 199-210 | NCBITaxon:11118 | denotes | coronavirus |
T23 | 211-223 | SP_7 | denotes | severe acute |
T24 | 224-235 | SP_7;UBERON:0001004 | denotes | respiratory |
T25 | 236-258 | SP_7 | denotes | syndrome coronavirus 2 |
T26 | 260-270 | SP_7 | denotes | SARS-CoV-2 |
T27 | 382-390 | SP_7 | denotes | COVID-19 |
T28 | 559-567 | SP_7 | denotes | COVID-19 |
T29 | 600-611 | UBERON:0001004 | denotes | respiratory |
T30 | 720-741 | UBERON:0004535 | denotes | cardiovascular system |
T31 | 849-863 | UBERON:0004535 | denotes | cardiovascular |
T32 | 926-939 | UBERON:0000948 | denotes | Transthoracic |
T33 | 990-1000 | UBERON:0002349 | denotes | myocardial |
T34 | 1060-1076 | UBERON:0002084 | denotes | left ventricular |
T35 | 1215-1223 | SP_7 | denotes | COVID-19 |
T20851 | 140-151 | NCBITaxon:11118 | denotes | coronavirus |
T97341 | 166-174 | SP_7 | denotes | COVID-19 |
T61228 | 199-210 | NCBITaxon:11118 | denotes | coronavirus |
T9029 | 211-223 | SP_7 | denotes | severe acute |
T75673 | 224-235 | SP_7;UBERON:0001004 | denotes | respiratory |
T36620 | 236-258 | SP_7 | denotes | syndrome coronavirus 2 |
T18134 | 260-270 | SP_7 | denotes | SARS-CoV-2 |
T33325 | 382-390 | SP_7 | denotes | COVID-19 |
T75404 | 559-567 | SP_7 | denotes | COVID-19 |
T53069 | 600-611 | UBERON:0001004 | denotes | respiratory |
T43876 | 720-741 | UBERON:0004535 | denotes | cardiovascular system |
T85327 | 849-863 | UBERON:0004535 | denotes | cardiovascular |
T80970 | 926-939 | UBERON:0000948 | denotes | Transthoracic |
T33822 | 990-1000 | UBERON:0002349 | denotes | myocardial |
T16632 | 1060-1076 | UBERON:0002084 | denotes | left ventricular |
T7327 | 1215-1223 | SP_7 | denotes | COVID-19 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T3 | 720-741 | Body_part | denotes | cardiovascular system | http://purl.org/sig/ont/fma/fma7161 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T4 | 720-741 | Body_part | denotes | cardiovascular system | http://purl.obolibrary.org/obo/UBERON_0004535 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 59-68 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T13 | 140-164 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T14 | 166-174 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T15 | 211-258 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T16 | 211-244 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T17 | 260-268 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T18 | 382-390 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T19 | 559-567 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T20 | 849-877 | Disease | denotes | cardiovascular disease (CVD) | http://purl.obolibrary.org/obo/MONDO_0004995 |
T21 | 1215-1223 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15 | 31-32 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T16 | 276-279 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T17 | 328-329 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T18 | 351-353 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T19 | 660-663 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T20 | 720-741 | http://purl.obolibrary.org/obo/UBERON_0004535 | denotes | cardiovascular system |
T21 | 720-741 | http://www.ebi.ac.uk/efo/EFO_0000791 | denotes | cardiovascular system |
T22 | 896-899 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T23 | 900-901 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T5 | 194-198 | Chemical | denotes | beta | http://purl.obolibrary.org/obo/CHEBI_10545 |
T6 | 890-895 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21 | 0-12 | Sentence | denotes | Introduction |
T22 | 13-125 | Sentence | denotes | In December 2019, a wave of cases of atypical pneumonia emerged from Wuhan City, Hubei Province in China [1, 2]. |
T23 | 126-354 | Sentence | denotes | This disease (coronavirus disease 2019 (COVID-19)) is caused by the beta coronavirus severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and has rapidly spread around the world, being declared a pandemic since March 11. |
T24 | 355-549 | Sentence | denotes | Early reports suggest that COVID-19 is generally mild; nevertheless, up to 19% of cases will require in-hospital management, and 6% will need to be admitted to the intensive care unit (ICU) [3]. |
T25 | 550-748 | Sentence | denotes | Although COVID-19 manifests in most patients with respiratory symptoms, other presentations can occur, and it has been suggested that there could be direct damage to the cardiovascular system [4-6]. |
T26 | 749-925 | Sentence | denotes | In addition, increasing concern exists regarding the severity of the disease in patients with prior cardiovascular disease (CVD), since this group has a worse prognosis [7, 8]. |
T27 | 926-1142 | Sentence | denotes | Transthoracic echocardiography (TTE) allows us to detect subtle myocardial damage with tools that are associated with prognosis, e.g. left ventricular ejection fraction (LVEF) or global longitudinal strain (GLS) [9]. |
T28 | 1143-1224 | Sentence | denotes | Herein, we present the echocardiographic findings in four patients with COVID-19. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T6 | 59-68 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T7 | 849-871 | Phenotype | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/HP_0001626 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
54 | 194-210 | Species | denotes | beta coronavirus | Tax:694002 |
55 | 211-258 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
56 | 260-270 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
57 | 586-594 | Species | denotes | patients | Tax:9606 |
58 | 829-837 | Species | denotes | patients | Tax:9606 |
59 | 1201-1209 | Species | denotes | patients | Tax:9606 |
60 | 59-68 | Disease | denotes | pneumonia | MESH:D011014 |
61 | 140-164 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
62 | 166-174 | Disease | denotes | COVID-19 | MESH:C000657245 |
63 | 382-390 | Disease | denotes | COVID-19 | MESH:C000657245 |
64 | 559-567 | Disease | denotes | COVID-19 | MESH:C000657245 |
65 | 600-620 | Disease | denotes | respiratory symptoms | MESH:D012818 |
66 | 849-871 | Disease | denotes | cardiovascular disease | MESH:D002318 |
67 | 873-876 | Disease | denotes | CVD | MESH:D002318 |
68 | 983-1007 | Disease | denotes | subtle myocardial damage | MESH:D009202 |
69 | 1215-1223 | Disease | denotes | COVID-19 | MESH:C000657245 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32595812-32031570-18405858 | 119-120 | 32031570 | denotes | 1 |
32595812-32015507-18405859 | 122-123 | 32015507 | denotes | 2 |
32595812-32091533-18405860 | 546-547 | 32091533 | denotes | 3 |
32595812-31986264-18405861 | 743-744 | 31986264 | denotes | 4 |
32595812-32211816-18405861 | 743-744 | 32211816 | denotes | 4 |
32595812-32139904-18405862 | 922-923 | 32139904 | denotes | 8 |
32595812-30627581-18405863 | 1139-1140 | 30627581 | denotes | 9 |