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PMC:7294857 / 3591-4351 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T57 118-126 SP_10 denotes SARS CoV
T58 131-139 SP_9 denotes MERS CoV
T59 157-162 G_3;PG_10;PR:000003622 denotes ACE 2
T60 177-189 GO:0009986 denotes cell surface
T61 213-225 CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T62 257-262 NCBITaxon:10239 denotes virus
T63 268-276 CHEBI:59132;CHEBI:59132 denotes antigens
T64 294-326 GO:0042611 denotes major histocompatibility complex
T65 328-331 GO:0042611 denotes MHC
T66 341-348 CHEBI:59132;CHEBI:59132 denotes antigen
T67 367-370 PR:000004122 denotes APC
T68 384-392 CHEBI:59132;CHEBI:59132 denotes antigens
T69 430-441 CL:0000542 denotes lymphocytes
T70 482-487 UBERON:0001443 denotes chest
T71 498-503 UBERON:0001443 denotes chest
T72 580-592 UBERON:0005169 denotes interstitial
T73 625-630 UBERON:0000170 denotes lungs
T10319 118-126 SP_10 denotes SARS CoV
T82872 131-139 SP_9 denotes MERS CoV
T62155 157-162 G_3;PG_10;PR:000003622 denotes ACE 2
T17817 177-189 GO:0009986 denotes cell surface
T2158 213-225 CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T92164 257-262 NCBITaxon:10239 denotes virus
T37102 268-276 CHEBI:59132;CHEBI:59132 denotes antigens
T75181 294-326 GO:0042611 denotes major histocompatibility complex
T51529 328-331 GO:0042611 denotes MHC
T51592 341-348 CHEBI:59132;CHEBI:59132 denotes antigen
T96320 367-370 PR:000004122 denotes APC
T73219 384-392 CHEBI:59132;CHEBI:59132 denotes antigens
T21612 430-441 CL:0000542 denotes lymphocytes
T74785 482-487 UBERON:0001443 denotes chest
T33890 498-503 UBERON:0001443 denotes chest
T29748 580-592 UBERON:0005169 denotes interstitial
T58313 625-630 UBERON:0000170 denotes lungs

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 177-189 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T9 177-181 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T10 213-225 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T11 294-326 Body_part denotes major histocompatibility complex http://purl.org/sig/ont/fma/fma84079
T12 328-331 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T13 341-365 Body_part denotes antigen-presenting cells http://purl.org/sig/ont/fma/fma273565
T14 360-365 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T15 430-441 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T16 468-473 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T17 482-487 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T18 498-503 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T19 625-630 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T5 482-487 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T6 498-503 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T24 118-122 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T38 177-181 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T39 257-262 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T40 360-365 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T41 468-473 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T42 482-487 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T43 498-503 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T44 625-630 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T12 213-225 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T13 268-276 Chemical denotes antigens http://purl.obolibrary.org/obo/CHEBI_59132
T14 341-348 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T15 367-370 Chemical denotes APC http://purl.obolibrary.org/obo/CHEBI_80551
T16 384-392 Chemical denotes antigens http://purl.obolibrary.org/obo/CHEBI_59132

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 10-22 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T2 294-326 http://purl.obolibrary.org/obo/GO_0046776 denotes major histocompatibility complex
T3 328-331 http://purl.obolibrary.org/obo/GO_0046776 denotes MHC

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T30 0-233 Sentence denotes The exact pathogenesis is currently unknown; however, it is suggested that it is most likely to be similar to that of SARS CoV and MERS CoV, which attach to ACE 2 enzyme on the cell surface with the help of their glycoprotein spikes.
T31 234-372 Sentence denotes After the entry of the virus, its antigens are presented to major histocompatibility complex (MHC) via the antigen-presenting cells (APC).
T32 373-478 Sentence denotes Then these antigens are recognized by specific cytotoxic lymphocytes that destroy the infected cells [4].
T33 479-656 Sentence denotes On chest X-ray and chest computed tomography (CT), ground-glass opacities, patchy consolidation, and interstitial changes at the periphery of the lungs are typical findings [7].
T34 657-760 Sentence denotes Real-time polymerase chain reaction (RT-PCR) is used to make the diagnosis of the suspected cases [4]. 

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
108 157-162 Gene denotes ACE 2 Gene:59272
109 118-126 Species denotes SARS CoV Tax:694009
110 131-139 Species denotes MERS CoV Tax:1335626
111 459-467 Disease denotes infected MESH:D007239