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PMC:7272971 / 28132-29233 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
889 100-104 Gene denotes ACE2 Gene:59272
890 185-189 Gene denotes ACE2 Gene:59272
891 0-5 Species denotes Human Tax:9606
892 6-19 Species denotes coronaviruses Tax:11118
893 73-83 Species denotes SARS‐CoV‐2 Tax:2697049
894 88-96 Species denotes SARS‐CoV Tax:694009
895 285-298 Species denotes coronaviruses Tax:11118
896 465-476 Species denotes coronavirus Tax:11118
897 585-590 Species denotes human Tax:9606
898 591-604 Species denotes coronaviruses Tax:11118
899 828-838 Species denotes SARS‐CoV‐2 Tax:2697049
900 1007-1015 Species denotes patients Tax:9606
901 1028-1041 Species denotes coronaviruses Tax:11118
902 520-543 Chemical denotes ‐acetylated sialic acid
903 121-144 Disease denotes initiation of infection MESH:D007239
904 204-211 Disease denotes corneal MESH:D003316
905 667-676 Disease denotes infection MESH:D007239
906 719-741 Disease denotes conjunctival infection MESH:D003229
907 783-792 Disease denotes pneumonia MESH:D011014
908 867-888 Disease denotes coronavirus infection MESH:D018352
909 915-929 Disease denotes conjunctivitis MESH:D003231
910 970-984 Disease denotes conjunctivitis MESH:D003231
911 998-1006 Disease denotes COVID‐19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T255 55-60 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T256 229-234 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T257 326-337 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T258 342-357 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T259 352-357 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T260 447-452 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T261 547-551 Body_part denotes tear http://purl.org/sig/ont/fma/fma59756
T262 552-565 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T263 848-859 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T264 1073-1078 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T98 848-859 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T78 783-792 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T79 915-929 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509
T80 970-984 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T202 73-77 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T203 88-92 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T204 135-144 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T205 667-676 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T206 732-741 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T207 783-792 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T208 828-832 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T209 879-888 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T210 915-929 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T211 970-984 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T212 998-1006 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T342 0-5 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T343 55-60 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T344 229-234 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T345 326-337 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T346 342-357 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T347 391-401 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T348 567-573 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes Animal
T349 585-590 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T350 614-621 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T351 848-859 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T352 848-859 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T72 532-543 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T73 539-543 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T74 552-565 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T190 0-61 Sentence denotes Human coronaviruses bind to specific receptors on host cells.
T191 62-145 Sentence denotes Binding of SARS‐CoV‐2 and SARS‐CoV to ACE2 is required for initiation of infection.
T192 146-431 Sentence denotes There is some preliminary evidence for ACE2 expression on corneal and conjunctival cells, but most of the other receptors known to bind to coronaviruses appear to be found only on fibroblasts and dendritic cells that are found under the surface epithelial layers of the ocular surface.
T193 432-566 Sentence denotes Lactoferrin in tears can inhibit coronavirus binding, as may decoy receptors such as 9‐O‐acetylated sialic acid on tear glycoproteins.
T194 567-860 Sentence denotes Animal studies on human coronaviruses have not focused on the role of ocular surface binding in the infection process, apart from one study that showed conjunctival infection could lead to mild signs and symptoms of pneumonia, but only transient association of SARS‐CoV‐2 with the conjunctiva.
T195 861-1016 Sentence denotes While coronavirus infection is rarely associated with conjunctivitis, there have been occasional findings of conjunctivitis in confirmed COVID‐19 patients.
T196 1017-1101 Sentence denotes Similarly, coronaviruses have been rarely isolated from tears or conjunctival swabs.