
PMC:7271924 / 14968-15607
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T247 | 85-89 | PR:000001153 | denotes | TLR2 |
T248 | 170-174 | PR:O88807 | denotes | PAD4 |
T249 | 200-209 | GO:0000785;GO:0006338 | denotes | chromatin |
T250 | 210-224 | GO:0006338 | denotes | decondensation |
T251 | 249-257 | CHEBI:15358;CHEBI:15358 | denotes | histones |
T252 | 273-280 | GO:0005634 | denotes | nucleus |
T253 | 286-302 | GO:0031965 | denotes | nuclear membrane |
T254 | 350-360 | CL:0000775 | denotes | Neutrophil |
T255 | 361-374 | GO:0005576 | denotes | Extracellular |
T256 | 465-475 | CL:0000775 | denotes | neutrophil |
T98033 | 85-89 | PR:000001153 | denotes | TLR2 |
T2481 | 170-174 | PR:O88807 | denotes | PAD4 |
T31813 | 200-209 | GO:0000785;GO:0006338 | denotes | chromatin |
T18232 | 210-224 | GO:0006338 | denotes | decondensation |
T86315 | 249-257 | CHEBI:15358;CHEBI:15358 | denotes | histones |
T88880 | 273-280 | GO:0005634 | denotes | nucleus |
T7872 | 286-302 | GO:0031965 | denotes | nuclear membrane |
T65967 | 350-360 | CL:0000775 | denotes | Neutrophil |
T66338 | 361-374 | GO:0005576 | denotes | Extracellular |
T6335 | 465-475 | CL:0000775 | denotes | neutrophil |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
244 | 56-83 | Gene | denotes | Toll-like receptors 2 and 4 | Gene:7097 |
338 | 170-174 | Gene | denotes | PAD4 | Gene:23569 |
339 | 337-348 | Gene | denotes | lactoferrin | Gene:280846 |
340 | 430-441 | Gene | denotes | lactoferrin | Gene:280846 |
341 | 140-168 | Gene | denotes | protein arginine deiminase 4 | Gene:23569 |
342 | 294-302 | Gene | denotes | membrane | Gene:43740571 |
343 | 226-245 | Disease | denotes | hypercitrullination |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T189 | 140-147 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T190 | 148-156 | Body_part | denotes | arginine | http://purl.org/sig/ont/fma/fma82763 |
T191 | 200-209 | Body_part | denotes | chromatin | http://purl.org/sig/ont/fma/fma67526 |
T192 | 249-257 | Body_part | denotes | histones | http://purl.org/sig/ont/fma/fma74413 |
T193 | 286-302 | Body_part | denotes | nuclear membrane | http://purl.org/sig/ont/fma/fma63888 |
T194 | 350-360 | Body_part | denotes | Neutrophil | http://purl.org/sig/ont/fma/fma62860 |
T195 | 398-405 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T196 | 465-475 | Body_part | denotes | neutrophil | http://purl.org/sig/ont/fma/fma62860 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T214 | 85-89 | http://purl.obolibrary.org/obo/CLO_0050768 | denotes | TLR2 |
T215 | 176-186 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
T216 | 294-302 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T217 | 536-544 | http://purl.obolibrary.org/obo/NCBITaxon_2 | denotes | Bacteria |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T187 | 140-147 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T188 | 148-156 | Chemical | denotes | arginine | http://purl.obolibrary.org/obo/CHEBI_16467|http://purl.obolibrary.org/obo/CHEBI_29016|http://purl.obolibrary.org/obo/CHEBI_32696 |
T191 | 273-280 | Chemical | denotes | nucleus | http://purl.obolibrary.org/obo/CHEBI_33252 |
T192 | 398-405 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T120 | 0-314 | Sentence | denotes | Figure 3 Bacterial binding to various receptors, e.g., Toll-like receptors 2 and 4 (TLR2 and 4), as well as complement receptors, leads to protein arginine deiminase 4 (PAD4) activation, followed by chromatin decondensation, hypercitrullination of histones 3 and 4 in the nucleus, and nuclear membrane disruption. |
T121 | 315-349 | Sentence | denotes | Granules also release lactoferrin. |
T122 | 350-476 | Sentence | denotes | Neutrophil Extracellular Traps (NETs) and their protein constituents (including lactoferrin) are released from the neutrophil. |
T123 | 477-535 | Sentence | denotes | Adapted from Jorch and Kubes (142) and Law and Gray (143). |
T124 | 536-582 | Sentence | denotes | Bacteria are expelled and trapped in the NETs. |
T125 | 583-639 | Sentence | denotes | Diagram created with BioRender (https://biorender.com/). |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32574271-28267716-34514674 | 507-510 | 28267716 | denotes | 142 |
32574271-29299029-34514675 | 530-533 | 29299029 | denotes | 143 |
TEST0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32574271-30-37-2882266 | 507-510 | ["28267716"] | denotes | 142 |
32574271-53-60-2882267 | 530-533 | ["29299029"] | denotes | 143 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32574271-28267716-34514674 | 507-510 | 28267716 | denotes | 142 |
32574271-29299029-34514675 | 530-533 | 29299029 | denotes | 143 |