PMC:7258756 / 5506-6235
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 122 | 165-175 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 123 | 313-323 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 124 | 591-601 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 125 | 682-692 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 396-402 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T48 | 165-173 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T49 | 165-169 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T50 | 313-321 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T51 | 313-317 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T52 | 591-599 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T53 | 591-595 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T54 | 682-690 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T55 | 682-686 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T13 | 418-425 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 41-52 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transported |
| T5 | 243-264 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
| T6 | 251-264 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T44 | 0-176 | Sentence | denotes | The suspected samples were collected and transported to the Indian Council of Medical Research-National Institute of Virology (ICMR-NIV), Pune, for the diagnosis of SARS-CoV-2. |
| T45 | 177-446 | Sentence | denotes | The specimens of the positive cases were diagnosed with real-time reverse transcription-polymerase chain reaction (RT-PCR)-specific for SARS-CoV-2 using the protocol published by the WHO13 and characterized by complete genome sequencing and epitope prediction analyses. |
| T46 | 447-635 | Sentence | denotes | These sequences were also compared with the available GenBank sequences to monitor the mutations and understand their relation with other known SARS-CoV-2 available in the public database. |
| T47 | 636-729 | Sentence | denotes | Here, we report molecular characterization of SARS-CoV-2 sequences from three positive cases. |