PMC:7253482 / 22668-22880 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"734","span":{"begin":188,"end":191},"obj":"Gene"},{"id":"743","span":{"begin":73,"end":79},"obj":"Chemical"},{"id":"745","span":{"begin":158,"end":165},"obj":"CellLine"}],"attributes":[{"id":"A734","pred":"tao:has_database_id","subj":"734","obj":"Gene:2995"},{"id":"A743","pred":"tao:has_database_id","subj":"743","obj":"MESH:D011134"},{"id":"A745","pred":"tao:has_database_id","subj":"745","obj":"CVCL:6642"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T131","span":{"begin":9,"end":19},"obj":"Body_part"},{"id":"T132","span":{"begin":36,"end":48},"obj":"Body_part"},{"id":"T133","span":{"begin":106,"end":119},"obj":"Body_part"},{"id":"T134","span":{"begin":166,"end":171},"obj":"Body_part"}],"attributes":[{"id":"A131","pred":"fma_id","subj":"T131","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A132","pred":"fma_id","subj":"T132","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A133","pred":"fma_id","subj":"T133","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A134","pred":"fma_id","subj":"T134","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T129","span":{"begin":9,"end":28},"obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"T130","span":{"begin":9,"end":28},"obj":"http://purl.obolibrary.org/obo/PR_000036907"},{"id":"T131","span":{"begin":52,"end":53},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T132","span":{"begin":166,"end":171},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T235","span":{"begin":9,"end":28},"obj":"Chemical"},{"id":"T236","span":{"begin":9,"end":14},"obj":"Chemical"},{"id":"T237","span":{"begin":15,"end":19},"obj":"Chemical"},{"id":"T238","span":{"begin":36,"end":48},"obj":"Chemical"},{"id":"T239","span":{"begin":106,"end":119},"obj":"Chemical"}],"attributes":[{"id":"A235","pred":"chebi_id","subj":"T235","obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"A236","pred":"chebi_id","subj":"T236","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A237","pred":"chebi_id","subj":"T237","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A238","pred":"chebi_id","subj":"T238","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A239","pred":"chebi_id","subj":"T239","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T57","span":{"begin":166,"end":171},"obj":"http://purl.obolibrary.org/obo/CL_0000000"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T68346","span":{"begin":9,"end":19},"obj":"JJ"},{"id":"T61476","span":{"begin":20,"end":28},"obj":"NNS"},{"id":"T43495","span":{"begin":29,"end":31},"obj":"IN"},{"id":"T46241","span":{"begin":32,"end":35},"obj":"DT"},{"id":"T24762","span":{"begin":36,"end":48},"obj":"NN"},{"id":"T53426","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T85566","span":{"begin":52,"end":53},"obj":"DT"},{"id":"T28528","span":{"begin":54,"end":61},"obj":"NN"},{"id":"T60922","span":{"begin":62,"end":65},"obj":"IN"},{"id":"T57613","span":{"begin":66,"end":72},"obj":"JJ"},{"id":"T92947","span":{"begin":73,"end":79},"obj":"NN"},{"id":"T81164","span":{"begin":80,"end":86},"obj":"NN"},{"id":"T10370","span":{"begin":87,"end":94},"obj":"NN"},{"id":"T61338","span":{"begin":96,"end":99},"obj":"DT"},{"id":"T48920","span":{"begin":100,"end":105},"obj":"JJ"},{"id":"T68543","span":{"begin":106,"end":119},"obj":"NNS"},{"id":"T82274","span":{"begin":120,"end":128},"obj":"VBN"},{"id":"T26853","span":{"begin":129,"end":133},"obj":"VBD"},{"id":"T71248","span":{"begin":134,"end":143},"obj":"VBN"},{"id":"T33142","span":{"begin":144,"end":146},"obj":"IN"},{"id":"T69877","span":{"begin":147,"end":154},"obj":"NNS"},{"id":"T70780","span":{"begin":155,"end":157},"obj":"IN"},{"id":"T61720","span":{"begin":158,"end":165},"obj":"NN"},{"id":"T11163","span":{"begin":166,"end":171},"obj":"NNS"},{"id":"T6955","span":{"begin":172,"end":177},"obj":"RB"},{"id":"T40144","span":{"begin":178,"end":182},"obj":"IN"},{"id":"T86025","span":{"begin":183,"end":187},"obj":"NN"},{"id":"T38606","span":{"begin":188,"end":191},"obj":"NN"},{"id":"T52914","span":{"begin":191,"end":192},"obj":"-COMMA-"},{"id":"T35666","span":{"begin":193,"end":198},"obj":"WDT"},{"id":"T47548","span":{"begin":199,"end":202},"obj":"VBD"},{"id":"T56105","span":{"begin":203,"end":210},"obj":"VBN"}],"relations":[{"id":"R16680","pred":"arg1Of","subj":"T61476","obj":"T68346"},{"id":"R67847","pred":"arg1Of","subj":"T61476","obj":"T43495"},{"id":"R27919","pred":"arg2Of","subj":"T24762","obj":"T43495"},{"id":"R63314","pred":"arg1Of","subj":"T24762","obj":"T46241"},{"id":"R60420","pred":"arg2Of","subj":"T28528","obj":"T53426"},{"id":"R62113","pred":"arg1Of","subj":"T28528","obj":"T85566"},{"id":"R84665","pred":"arg1Of","subj":"T28528","obj":"T60922"},{"id":"R14478","pred":"arg2Of","subj":"T10370","obj":"T60922"},{"id":"R14520","pred":"arg1Of","subj":"T10370","obj":"T57613"},{"id":"R6605","pred":"arg1Of","subj":"T10370","obj":"T92947"},{"id":"R68476","pred":"arg1Of","subj":"T10370","obj":"T81164"},{"id":"R60211","pred":"arg1Of","subj":"T68543","obj":"T61338"},{"id":"R42722","pred":"arg1Of","subj":"T68543","obj":"T48920"},{"id":"R52020","pred":"arg2Of","subj":"T68543","obj":"T82274"},{"id":"R44667","pred":"arg1Of","subj":"T68543","obj":"T26853"},{"id":"R84689","pred":"arg2Of","subj":"T71248","obj":"T26853"},{"id":"R23244","pred":"arg2Of","subj":"T68543","obj":"T71248"},{"id":"R39024","pred":"arg1Of","subj":"T71248","obj":"T33142"},{"id":"R14422","pred":"arg2Of","subj":"T69877","obj":"T33142"},{"id":"R38169","pred":"arg1Of","subj":"T69877","obj":"T70780"},{"id":"R60619","pred":"arg2Of","subj":"T11163","obj":"T70780"},{"id":"R96798","pred":"arg1Of","subj":"T11163","obj":"T61720"},{"id":"R96790","pred":"arg1Of","subj":"T11163","obj":"T6955"},{"id":"R44107","pred":"arg1Of","subj":"T6955","obj":"T40144"},{"id":"R65398","pred":"arg2Of","subj":"T38606","obj":"T40144"},{"id":"R51633","pred":"arg1Of","subj":"T38606","obj":"T86025"},{"id":"R96070","pred":"arg1Of","subj":"T38606","obj":"T52914"},{"id":"R62312","pred":"arg1Of","subj":"T38606","obj":"T35666"},{"id":"R23171","pred":"arg1Of","subj":"T38606","obj":"T47548"},{"id":"R24376","pred":"arg2Of","subj":"T56105","obj":"T47548"},{"id":"R72771","pred":"arg2Of","subj":"T38606","obj":"T56105"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T130","span":{"begin":9,"end":19},"obj":"Body_part"},{"id":"T131","span":{"begin":36,"end":48},"obj":"Body_part"},{"id":"T132","span":{"begin":106,"end":119},"obj":"Body_part"},{"id":"T133","span":{"begin":166,"end":171},"obj":"Body_part"}],"attributes":[{"id":"A130","pred":"fma_id","subj":"T130","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A131","pred":"fma_id","subj":"T131","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A132","pred":"fma_id","subj":"T132","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A133","pred":"fma_id","subj":"T133","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T160","span":{"begin":9,"end":28},"obj":"Chemical"},{"id":"T161","span":{"begin":36,"end":48},"obj":"Chemical"},{"id":"T162","span":{"begin":106,"end":119},"obj":"Chemical"}],"attributes":[{"id":"A160","pred":"chebi_id","subj":"T160","obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"A161","pred":"chebi_id","subj":"T161","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A162","pred":"chebi_id","subj":"T162","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T160","span":{"begin":183,"end":187},"obj":"Species"}],"attributes":[{"id":"A160","pred":"ncbi_taxonomy_id","subj":"T160","obj":"NCBItxid:11620"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"743","span":{"begin":73,"end":79},"obj":"Chemical"},{"id":"745","span":{"begin":158,"end":165},"obj":"CellLine"},{"id":"734","span":{"begin":188,"end":191},"obj":"Gene"}],"attributes":[{"id":"A743","pred":"pubann:denotes","subj":"743","obj":"MESH:D011134"},{"id":"A745","pred":"pubann:denotes","subj":"745","obj":"CVCL:6642"},{"id":"A734","pred":"pubann:denotes","subj":"734","obj":"Gene:2995"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T4832","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T4840","span":{"begin":106,"end":119},"obj":"Protein"},{"id":"T4925","span":{"begin":188,"end":191},"obj":"Protein"}],"attributes":[{"id":"A4832","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/Q77MR8"},{"id":"A4833","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/Q6LAR3"},{"id":"A4834","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P33500"},{"id":"A4835","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P22651"},{"id":"A4836","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P22650"},{"id":"A4837","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P18535"},{"id":"A4838","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P13374"},{"id":"A4839","pred":"uniprot_id","subj":"T4832","obj":"https://www.uniprot.org/uniprot/P10681"},{"id":"A4840","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q9QSP1"},{"id":"A4841","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q9QJT6"},{"id":"A4842","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q9JGT4"},{"id":"A4843","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q9IPJ6"},{"id":"A4844","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q9DIC6"},{"id":"A4845","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q91DS0"},{"id":"A4846","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q91C28"},{"id":"A4847","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8QQA2"},{"id":"A4848","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8QPE5"},{"id":"A4849","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8QPE4"},{"id":"A4850","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8QPE3"},{"id":"A4851","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8JTH0"},{"id":"A4852","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8BDV6"},{"id":"A4853","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8B6J6"},{"id":"A4854","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8B0I1"},{"id":"A4855","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8B0H6"},{"id":"A4856","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q8B0H1"},{"id":"A4857","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q89669"},{"id":"A4858","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q85213"},{"id":"A4859","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q82706"},{"id":"A4860","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q82683"},{"id":"A4861","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q82020"},{"id":"A4862","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q787B5"},{"id":"A4863","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q77SK0"},{"id":"A4864","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q77N36"},{"id":"A4865","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q76G52"},{"id":"A4866","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q75T09"},{"id":"A4867","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q6X1D5"},{"id":"A4868","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q6X1D1"},{"id":"A4869","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q6TYA0"},{"id":"A4870","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q6E0W7"},{"id":"A4871","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q66T62"},{"id":"A4872","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5VKP3"},{"id":"A4873","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5VKN9"},{"id":"A4874","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5K2K4"},{"id":"A4875","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX93"},{"id":"A4876","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX92"},{"id":"A4877","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX91"},{"id":"A4878","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX90"},{"id":"A4879","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX89"},{"id":"A4880","pred":"uniprot_id","subj":"T4840","obj":"https://www.uniprot.org/uniprot/Q5IX8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amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}

    LitCovid-sample-Glycan

    {"project":"LitCovid-sample-Glycan","denotations":[{"id":"T49","span":{"begin":96,"end":99},"obj":"https://glytoucan.org/Structures/Glycans/G05518TD"}],"text":"cessible amino-acid residues of the glycoprotein as a measure for global glycan shield density. All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived f"}