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PMC:7253482 / 22668-22880 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
734 188-191 Gene denotes GPC Gene:2995
743 73-79 Chemical denotes glycan MESH:D011134
745 158-165 CellLine denotes HEK293F CVCL:6642

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T131 9-19 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T132 36-48 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T133 106-119 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T134 166-171 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T129 9-28 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino-acid residues
T130 9-28 http://purl.obolibrary.org/obo/PR_000036907 denotes amino-acid residues
T131 52-53 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 166-171 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T235 9-28 Chemical denotes amino-acid residues http://purl.obolibrary.org/obo/CHEBI_33708
T236 9-14 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T237 15-19 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T238 36-48 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T239 106-119 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T57 166-171 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T68346 9-19 JJ denotes amino-acid
T61476 20-28 NNS denotes residues
T43495 29-31 IN denotes of
T46241 32-35 DT denotes the
T24762 36-48 NN denotes glycoprotein
T53426 49-51 IN denotes as
T85566 52-53 DT denotes a
T28528 54-61 NN denotes measure
T60922 62-65 IN denotes for
T57613 66-72 JJ denotes global
T92947 73-79 NN denotes glycan
T81164 80-86 NN denotes shield
T10370 87-94 NN denotes density
T61338 96-99 DT denotes All
T48920 100-105 JJ denotes viral
T68543 106-119 NNS denotes glycoproteins
T82274 120-128 VBN denotes analysed
T26853 129-133 VBD denotes were
T71248 134-143 VBN denotes expressed
T33142 144-146 IN denotes as
T69877 147-154 NNS denotes trimers
T70780 155-157 IN denotes in
T61720 158-165 NN denotes HEK293F
T11163 166-171 NNS denotes cells
T6955 172-177 RB denotes apart
T40144 178-182 IN denotes from
T86025 183-187 NN denotes LASV
T38606 188-191 NN denotes GPC
T52914 191-192 -COMMA- denotes ,
T35666 193-198 WDT denotes which
T47548 199-202 VBD denotes was
T56105 203-210 VBN denotes derived
R16680 T61476 T68346 arg1Of residues,amino-acid
R67847 T61476 T43495 arg1Of residues,of
R27919 T24762 T43495 arg2Of glycoprotein,of
R63314 T24762 T46241 arg1Of glycoprotein,the
R60420 T28528 T53426 arg2Of measure,as
R62113 T28528 T85566 arg1Of measure,a
R84665 T28528 T60922 arg1Of measure,for
R14478 T10370 T60922 arg2Of density,for
R14520 T10370 T57613 arg1Of density,global
R6605 T10370 T92947 arg1Of density,glycan
R68476 T10370 T81164 arg1Of density,shield
R60211 T68543 T61338 arg1Of glycoproteins,All
R42722 T68543 T48920 arg1Of glycoproteins,viral
R52020 T68543 T82274 arg2Of glycoproteins,analysed
R44667 T68543 T26853 arg1Of glycoproteins,were
R84689 T71248 T26853 arg2Of expressed,were
R23244 T68543 T71248 arg2Of glycoproteins,expressed
R39024 T71248 T33142 arg1Of expressed,as
R14422 T69877 T33142 arg2Of trimers,as
R38169 T69877 T70780 arg1Of trimers,in
R60619 T11163 T70780 arg2Of cells,in
R96798 T11163 T61720 arg1Of cells,HEK293F
R96790 T11163 T6955 arg1Of cells,apart
R44107 T6955 T40144 arg1Of apart,from
R65398 T38606 T40144 arg2Of GPC,from
R51633 T38606 T86025 arg1Of GPC,LASV
R96070 T38606 T52914 arg1Of GPC,","
R62312 T38606 T35666 arg1Of GPC,which
R23171 T38606 T47548 arg1Of GPC,was
R24376 T56105 T47548 arg2Of derived,was
R72771 T38606 T56105 arg2Of GPC,derived

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T130 9-19 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T131 36-48 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T132 106-119 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T133 166-171 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T160 9-28 Chemical denotes amino-acid residues http://purl.obolibrary.org/obo/CHEBI_33708
T161 36-48 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T162 106-119 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T160 183-187 Species denotes LASV NCBItxid:11620

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
743 73-79 Chemical denotes glycan MESH:D011134
745 158-165 CellLine denotes HEK293F CVCL:6642
734 188-191 Gene denotes GPC Gene:2995

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T4832 36-53 Protein denotes glycoprotein as a https://www.uniprot.org/uniprot/Q77MR8|https://www.uniprot.org/uniprot/Q6LAR3|https://www.uniprot.org/uniprot/P33500|https://www.uniprot.org/uniprot/P22651|https://www.uniprot.org/uniprot/P22650|https://www.uniprot.org/uniprot/P18535|https://www.uniprot.org/uniprot/P13374|https://www.uniprot.org/uniprot/P10681
T4840 106-119 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T4925 188-191 Protein denotes GPC https://www.uniprot.org/uniprot/P03711

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T49 96-99 https://glytoucan.org/Structures/Glycans/G05518TD denotes All