PMC:7253482 / 18304-18634 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"658","span":{"begin":64,"end":67},"obj":"Gene"},{"id":"668","span":{"begin":58,"end":63},"obj":"Species"},{"id":"673","span":{"begin":50,"end":57},"obj":"Chemical"},{"id":"674","span":{"begin":157,"end":163},"obj":"Chemical"}],"attributes":[{"id":"A658","pred":"tao:has_database_id","subj":"658","obj":"Gene:64006"},{"id":"A668","pred":"tao:has_database_id","subj":"668","obj":"Tax:11676"},{"id":"A673","pred":"tao:has_database_id","subj":"673","obj":"MESH:D011134"},{"id":"A674","pred":"tao:has_database_id","subj":"674","obj":"MESH:D011134"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T105","span":{"begin":58,"end":61},"obj":"Body_part"},{"id":"T106","span":{"begin":249,"end":256},"obj":"Body_part"}],"attributes":[{"id":"A105","pred":"fma_id","subj":"T105","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A106","pred":"fma_id","subj":"T106","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T197","span":{"begin":50,"end":57},"obj":"Chemical"},{"id":"T198","span":{"begin":249,"end":256},"obj":"Chemical"}],"attributes":[{"id":"A197","pred":"chebi_id","subj":"T197","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A198","pred":"chebi_id","subj":"T198","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T53","span":{"begin":302,"end":307},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T55283","span":{"begin":8,"end":16},"obj":"VBD"},{"id":"T5337","span":{"begin":17,"end":21},"obj":"IN"},{"id":"T85969","span":{"begin":22,"end":30},"obj":"NNS"},{"id":"T15501","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T81842","span":{"begin":34,"end":41},"obj":"NN"},{"id":"T53947","span":{"begin":42,"end":49},"obj":"VBN"},{"id":"T58293","span":{"begin":50,"end":57},"obj":"NNS"},{"id":"T78469","span":{"begin":58,"end":63},"obj":"NN"},{"id":"T11314","span":{"begin":64,"end":67},"obj":"NN"},{"id":"T63261","span":{"begin":68,"end":73},"obj":"VBZ"},{"id":"T50401","span":{"begin":74,"end":76},"obj":"TO"},{"id":"T72222","span":{"begin":77,"end":79},"obj":"DT"},{"id":"T69150","span":{"begin":80,"end":89},"obj":"JJ"},{"id":"T26975","span":{"begin":90,"end":97},"obj":"NN"},{"id":"T64977","span":{"begin":98,"end":100},"obj":"IN"},{"id":"T71776","span":{"begin":101,"end":113},"obj":"NNS"},{"id":"T7784","span":{"begin":114,"end":118},"obj":"WDT"},{"id":"T35226","span":{"begin":119,"end":124},"obj":"VBP"},{"id":"T68570","span":{"begin":125,"end":137},"obj":"JJR"},{"id":"T34602","span":{"begin":138,"end":149},"obj":"NN"},{"id":"T35212","span":{"begin":150,"end":152},"obj":"IN"},{"id":"T61552","span":{"begin":153,"end":156},"obj":"DT"},{"id":"T88226","span":{"begin":157,"end":163},"obj":"NN"},{"id":"T2686","span":{"begin":164,"end":170},"obj":"NN"},{"id":"T70456","span":{"begin":172,"end":176},"obj":"DT"},{"id":"T49009","span":{"begin":177,"end":186},"obj":"NN"},{"id":"T80667","span":{"begin":187,"end":194},"obj":"VBZ"},{"id":"T33829","span":{"begin":195,"end":202},"obj":"JJ"},{"id":"T1508","span":{"begin":203,"end":213},"obj":"NNS"},{"id":"T66208","span":{"begin":214,"end":221},"obj":"IN"},{"id":"T95551","span":{"begin":222,"end":228},"obj":"VBN"},{"id":"T27513","span":{"begin":229,"end":232},"obj":"CC"},{"id":"T63689","span":{"begin":233,"end":240},"obj":"VBN"},{"id":"T23712","span":{"begin":241,"end":248},"obj":"NN"},{"id":"T90175","span":{"begin":249,"end":256},"obj":"NN"},{"id":"T66804","span":{"begin":257,"end":264},"obj":"NN"},{"id":"T71072","span":{"begin":264,"end":265},"obj":"-COMMA-"},{"id":"T80348","span":{"begin":266,"end":271},"obj":"WDT"},{"id":"T9316","span":{"begin":272,"end":275},"obj":"MD"},{"id":"T90504","span":{"begin":276,"end":281},"obj":"VB"},{"id":"T42110","span":{"begin":282,"end":284},"obj":"TO"},{"id":"T69932","span":{"begin":285,"end":291},"obj":"VB"},{"id":"T67682","span":{"begin":292,"end":301},"obj":"JJ"},{"id":"T2204","span":{"begin":302,"end":307},"obj":"NNS"},{"id":"T70578","span":{"begin":308,"end":310},"obj":"IN"},{"id":"T95274","span":{"begin":311,"end":324},"obj":"NN"}],"relations":[{"id":"R40497","pred":"arg2Of","subj":"T63261","obj":"T55283"},{"id":"R90148","pred":"arg1Of","subj":"T63261","obj":"T5337"},{"id":"R54019","pred":"arg1Of","subj":"T85969","obj":"T15501"},{"id":"R94664","pred":"arg2Of","subj":"T11314","obj":"T15501"},{"id":"R43741","pred":"arg1Of","subj":"T11314","obj":"T81842"},{"id":"R70932","pred":"arg2Of","subj":"T11314","obj":"T53947"},{"id":"R57155","pred":"arg1Of","subj":"T11314","obj":"T58293"},{"id":"R11772","pred":"arg1Of","subj":"T11314","obj":"T78469"},{"id":"R59703","pred":"arg1Of","subj":"T85969","obj":"T63261"},{"id":"R6442","pred":"arg1Of","subj":"T63261","obj":"T50401"},{"id":"R58022","pred":"arg2Of","subj":"T26975","obj":"T50401"},{"id":"R19289","pred":"arg1Of","subj":"T26975","obj":"T72222"},{"id":"R58201","pred":"arg1Of","subj":"T26975","obj":"T69150"},{"id":"R3033","pred":"arg1Of","subj":"T26975","obj":"T64977"},{"id":"R14059","pred":"arg2Of","subj":"T71776","obj":"T64977"},{"id":"R86686","pred":"arg1Of","subj":"T71776","obj":"T7784"},{"id":"R47642","pred":"arg1Of","subj":"T71776","obj":"T35226"},{"id":"R48661","pred":"arg2Of","subj":"T34602","obj":"T35226"},{"id":"R6985","pred":"arg1Of","subj":"T34602","obj":"T68570"},{"id":"R73400","pred":"arg1Of","subj":"T34602","obj":"T35212"},{"id":"R23718","pred":"arg2Of","subj":"T2686","obj":"T35212"},{"id":"R43138","pred":"arg1Of","subj":"T2686","obj":"T61552"},{"id":"R16504","pred":"arg1Of","subj":"T2686","obj":"T88226"},{"id":"R91717","pred":"arg1Of","subj":"T49009","obj":"T70456"},{"id":"R60972","pred":"arg1Of","subj":"T49009","obj":"T80667"},{"id":"R5536","pred":"arg2Of","subj":"T1508","obj":"T80667"},{"id":"R14014","pred":"arg1Of","subj":"T1508","obj":"T33829"},{"id":"R71165","pred":"arg1Of","subj":"T1508","obj":"T66208"},{"id":"R84605","pred":"arg2Of","subj":"T66804","obj":"T66208"},{"id":"R36824","pred":"arg2Of","subj":"T66804","obj":"T95551"},{"id":"R6781","pred":"arg1Of","subj":"T66804","obj":"T27513"},{"id":"R13511","pred":"arg2Of","subj":"T66804","obj":"T63689"},{"id":"R42837","pred":"arg1Of","subj":"T66804","obj":"T23712"},{"id":"R35366","pred":"arg1Of","subj":"T66804","obj":"T90175"},{"id":"R40133","pred":"arg1Of","subj":"T66804","obj":"T71072"},{"id":"R67428","pred":"arg1Of","subj":"T66804","obj":"T80348"},{"id":"R19941","pred":"arg1Of","subj":"T66804","obj":"T9316"},{"id":"R75191","pred":"arg2Of","subj":"T90504","obj":"T9316"},{"id":"R68916","pred":"arg1Of","subj":"T66804","obj":"T90504"},{"id":"R85823","pred":"arg2Of","subj":"T69932","obj":"T90504"},{"id":"R15048","pred":"arg1Of","subj":"T69932","obj":"T42110"},{"id":"R88756","pred":"arg1Of","subj":"T66804","obj":"T69932"},{"id":"R66006","pred":"arg2Of","subj":"T2204","obj":"T69932"},{"id":"R13031","pred":"arg1Of","subj":"T2204","obj":"T67682"},{"id":"R31526","pred":"arg1Of","subj":"T2204","obj":"T70578"},{"id":"R46771","pred":"arg2Of","subj":"T95274","obj":"T70578"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T104","span":{"begin":58,"end":61},"obj":"Body_part"},{"id":"T105","span":{"begin":249,"end":256},"obj":"Body_part"}],"attributes":[{"id":"A104","pred":"fma_id","subj":"T104","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A105","pred":"fma_id","subj":"T105","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T136","span":{"begin":50,"end":57},"obj":"Chemical"},{"id":"T137","span":{"begin":249,"end":256},"obj":"Chemical"}],"attributes":[{"id":"A136","pred":"chebi_id","subj":"T136","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A137","pred":"chebi_id","subj":"T137","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T140","span":{"begin":58,"end":63},"obj":"Species"}],"attributes":[{"id":"A140","pred":"ncbi_taxonomy_id","subj":"T140","obj":"NCBItxid:11676"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T108","span":{"begin":172,"end":325},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"673","span":{"begin":50,"end":57},"obj":"Chemical"},{"id":"668","span":{"begin":58,"end":63},"obj":"Species"},{"id":"658","span":{"begin":64,"end":67},"obj":"Gene"},{"id":"674","span":{"begin":157,"end":163},"obj":"Chemical"}],"attributes":[{"id":"A673","pred":"pubann:denotes","subj":"673","obj":"MESH:D011134"},{"id":"A668","pred":"pubann:denotes","subj":"668","obj":"Tax:11676"},{"id":"A658","pred":"pubann:denotes","subj":"658","obj":"Gene:64006"},{"id":"A674","pred":"pubann:denotes","subj":"674","obj":"MESH:D011134"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sample-UniProt

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showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T108","span":{"begin":172,"end":325},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ecently showed51 that dynamics in surface exposed glycans HIV-1 Env leads to an extensive network of interactions that drive higher-order structuring in the glycan shield. This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability. Cryo"}