> top > docs > PMC:7253482 > spans > 18304-18634 > annotations

PMC:7253482 / 18304-18634 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
658 64-67 Gene denotes Env Gene:64006
668 58-63 Species denotes HIV-1 Tax:11676
673 50-57 Chemical denotes glycans MESH:D011134
674 157-163 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T105 58-61 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T106 249-256 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T197 50-57 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T198 249-256 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T53 302-307 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T55283 8-16 VBD denotes showed51
T5337 17-21 IN denotes that
T85969 22-30 NNS denotes dynamics
T15501 31-33 IN denotes in
T81842 34-41 NN denotes surface
T53947 42-49 VBN denotes exposed
T58293 50-57 NNS denotes glycans
T78469 58-63 NN denotes HIV-1
T11314 64-67 NN denotes Env
T63261 68-73 VBZ denotes leads
T50401 74-76 TO denotes to
T72222 77-79 DT denotes an
T69150 80-89 JJ denotes extensive
T26975 90-97 NN denotes network
T64977 98-100 IN denotes of
T71776 101-113 NNS denotes interactions
T7784 114-118 WDT denotes that
T35226 119-124 VBP denotes drive
T68570 125-137 JJR denotes higher-order
T34602 138-149 NN denotes structuring
T35212 150-152 IN denotes in
T61552 153-156 DT denotes the
T88226 157-163 NN denotes glycan
T2686 164-170 NN denotes shield
T70456 172-176 DT denotes This
T49009 177-186 NN denotes structure
T80667 187-194 VBZ denotes defines
T33829 195-202 JJ denotes diffuse
T1508 203-213 NNS denotes boundaries
T66208 214-221 IN denotes between
T95551 222-228 VBN denotes buried
T27513 229-232 CC denotes and
T63689 233-240 VBN denotes exposed
T23712 241-248 NN denotes surface
T90175 249-256 NN denotes protein
T66804 257-264 NN denotes surface
T71072 264-265 -COMMA- denotes ,
T80348 266-271 WDT denotes which
T9316 272-275 MD denotes can
T90504 276-281 VB denotes serve
T42110 282-284 TO denotes to
T69932 285-291 VB denotes define
T67682 292-301 JJ denotes potential
T2204 302-307 NNS denotes sites
T70578 308-310 IN denotes of
T95274 311-324 NN denotes vulnerability
R40497 T63261 T55283 arg2Of leads,showed51
R90148 T63261 T5337 arg1Of leads,that
R54019 T85969 T15501 arg1Of dynamics,in
R94664 T11314 T15501 arg2Of Env,in
R43741 T11314 T81842 arg1Of Env,surface
R70932 T11314 T53947 arg2Of Env,exposed
R57155 T11314 T58293 arg1Of Env,glycans
R11772 T11314 T78469 arg1Of Env,HIV-1
R59703 T85969 T63261 arg1Of dynamics,leads
R6442 T63261 T50401 arg1Of leads,to
R58022 T26975 T50401 arg2Of network,to
R19289 T26975 T72222 arg1Of network,an
R58201 T26975 T69150 arg1Of network,extensive
R3033 T26975 T64977 arg1Of network,of
R14059 T71776 T64977 arg2Of interactions,of
R86686 T71776 T7784 arg1Of interactions,that
R47642 T71776 T35226 arg1Of interactions,drive
R48661 T34602 T35226 arg2Of structuring,drive
R6985 T34602 T68570 arg1Of structuring,higher-order
R73400 T34602 T35212 arg1Of structuring,in
R23718 T2686 T35212 arg2Of shield,in
R43138 T2686 T61552 arg1Of shield,the
R16504 T2686 T88226 arg1Of shield,glycan
R91717 T49009 T70456 arg1Of structure,This
R60972 T49009 T80667 arg1Of structure,defines
R5536 T1508 T80667 arg2Of boundaries,defines
R14014 T1508 T33829 arg1Of boundaries,diffuse
R71165 T1508 T66208 arg1Of boundaries,between
R84605 T66804 T66208 arg2Of surface,between
R36824 T66804 T95551 arg2Of surface,buried
R6781 T66804 T27513 arg1Of surface,and
R13511 T66804 T63689 arg2Of surface,exposed
R42837 T66804 T23712 arg1Of surface,surface
R35366 T66804 T90175 arg1Of surface,protein
R40133 T66804 T71072 arg1Of surface,","
R67428 T66804 T80348 arg1Of surface,which
R19941 T66804 T9316 arg1Of surface,can
R75191 T90504 T9316 arg2Of serve,can
R68916 T66804 T90504 arg1Of surface,serve
R85823 T69932 T90504 arg2Of define,serve
R15048 T69932 T42110 arg1Of define,to
R88756 T66804 T69932 arg1Of surface,define
R66006 T2204 T69932 arg2Of sites,define
R13031 T2204 T67682 arg1Of sites,potential
R31526 T2204 T70578 arg1Of sites,of
R46771 T95274 T70578 arg2Of vulnerability,of

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T104 58-61 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T105 249-256 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T136 50-57 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T137 249-256 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T140 58-63 Species denotes HIV-1 NCBItxid:11676

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T108 172-325 Sentence denotes This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
673 50-57 Chemical denotes glycans MESH:D011134
668 58-63 Species denotes HIV-1 Tax:11676
658 64-67 Gene denotes Env Gene:64006
674 157-163 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3773 64-67 Protein denotes Env https://www.uniprot.org/uniprot/C1JJY3|https://www.uniprot.org/uniprot/P24123
T3775 241-256 Protein denotes surface protein https://www.uniprot.org/uniprot/V9GXQ5|https://www.uniprot.org/uniprot/Q9YWM3|https://www.uniprot.org/uniprot/Q9YNA9|https://www.uniprot.org/uniprot/Q9YNA7|https://www.uniprot.org/uniprot/Q9YNA5|https://www.uniprot.org/uniprot/Q9UQF0|https://www.uniprot.org/uniprot/Q9UNM3|https://www.uniprot.org/uniprot/Q9UKH3|https://www.uniprot.org/uniprot/Q9UBU4|https://www.uniprot.org/uniprot/Q9TTC0|https://www.uniprot.org/uniprot/Q9QC06|https://www.uniprot.org/uniprot/Q9NZG3|https://www.uniprot.org/uniprot/Q9NX77|https://www.uniprot.org/uniprot/Q9NRZ2|https://www.uniprot.org/uniprot/Q9N2K0|https://www.uniprot.org/uniprot/Q9N2J8|https://www.uniprot.org/uniprot/Q9IZT0|https://www.uniprot.org/uniprot/Q96PI6|https://www.uniprot.org/uniprot/Q96PI3|https://www.uniprot.org/uniprot/Q96L63|https://www.uniprot.org/uniprot/Q902F9|https://www.uniprot.org/uniprot/Q902F8|https://www.uniprot.org/uniprot/Q8TD93|https://www.uniprot.org/uniprot/Q8NHY7|https://www.uniprot.org/uniprot/Q8MIB6|https://www.uniprot.org/uniprot/Q8BI41|https://www.uniprot.org/uniprot/Q89529|https://www.uniprot.org/uniprot/Q88938|https://www.uniprot.org/uniprot/Q87041|https://www.uniprot.org/uniprot/Q86355|https://www.uniprot.org/uniprot/Q85646|https://www.uniprot.org/uniprot/Q85629|https://www.uniprot.org/uniprot/Q85628|https://www.uniprot.org/uniprot/Q85517|https://www.uniprot.org/uniprot/Q85516|https://www.uniprot.org/uniprot/Q85515|https://www.uniprot.org/uniprot/Q85501|https://www.uniprot.org/uniprot/Q85500|https://www.uniprot.org/uniprot/Q85489|https://www.uniprot.org/uniprot/Q85488|https://www.uniprot.org/uniprot/Q82857|https://www.uniprot.org/uniprot/Q811N4|https://www.uniprot.org/uniprot/Q811M9|https://www.uniprot.org/uniprot/Q80SY1|https://www.uniprot.org/uniprot/Q80SY0|https://www.uniprot.org/uniprot/Q80SW8|https://www.uniprot.org/uniprot/Q80SW7|https://www.uniprot.org/uniprot/Q78N94|https://www.uniprot.org/uniprot/Q78N73|https://www.uniprot.org/uniprot/Q78N71|https://www.uniprot.org/uniprot/P60507|https://www.uniprot.org/uniprot/P51520|https://www.uniprot.org/uniprot/P51519|https://www.uniprot.org/uniprot/P51515|https://www.uniprot.org/uniprot/P35954|https://www.uniprot.org/uniprot/P33498|https://www.uniprot.org/uniprot/P32541|https://www.uniprot.org/uniprot/P31796|https://www.uniprot.org/uniprot/P31794|https://www.uniprot.org/uniprot/P31791|https://www.uniprot.org/uniprot/P31789|https://www.uniprot.org/uniprot/P31627|https://www.uniprot.org/uniprot/P31626|https://www.uniprot.org/uniprot/P31621|https://www.uniprot.org/uniprot/P27399|https://www.uniprot.org/uniprot/P26804|https://www.uniprot.org/uniprot/P26803|https://www.uniprot.org/uniprot/P25507|https://www.uniprot.org/uniprot/P25506|https://www.uniprot.org/uniprot/P25505|https://www.uniprot.org/uniprot/P25504|https://www.uniprot.org/uniprot/P25057|https://www.uniprot.org/uniprot/P23423|https://www.uniprot.org/uniprot/P23422|https://www.uniprot.org/uniprot/P23073|https://www.uniprot.org/uniprot/P23064|https://www.uniprot.org/uniprot/P22430|https://www.uniprot.org/uniprot/P22429|https://www.uniprot.org/uniprot/P22428|https://www.uniprot.org/uniprot/P22427|https://www.uniprot.org/uniprot/P21446|https://www.uniprot.org/uniprot/P21445|https://www.uniprot.org/uniprot/P21444|https://www.uniprot.org/uniprot/P21443|https://www.uniprot.org/uniprot/P21436|https://www.uniprot.org/uniprot/P21415|https://www.uniprot.org/uniprot/P21412|https://www.uniprot.org/uniprot/P19557|https://www.uniprot.org/uniprot/P19556|https://www.uniprot.org/uniprot/P19030|https://www.uniprot.org/uniprot/P16899|https://www.uniprot.org/uniprot/P16090|https://www.uniprot.org/uniprot/P16082|https://www.uniprot.org/uniprot/P15073|https://www.uniprot.org/uniprot/P14351|https://www.uniprot.org/uniprot/P14075|https://www.uniprot.org/uniprot/P11306|https://www.uniprot.org/uniprot/P11268|https://www.uniprot.org/uniprot/P11261|https://www.uniprot.org/uniprot/P10404|https://www.uniprot.org/uniprot/P10269|https://www.uniprot.org/uniprot/P10259|https://www.uniprot.org/uniprot/P0C212|https://www.uniprot.org/uniprot/P08360|https://www.uniprot.org/uniprot/P08359|https://www.uniprot.org/uniprot/P07575|https://www.uniprot.org/uniprot/P06752|https://www.uniprot.org/uniprot/P06751|https://www.uniprot.org/uniprot/P06445|https://www.uniprot.org/uniprot/P04502|https://www.uniprot.org/uniprot/P04027|https://www.uniprot.org/uniprot/P03399|https://www.uniprot.org/uniprot/P03397|https://www.uniprot.org/uniprot/P03396|https://www.uniprot.org/uniprot/P03395|https://www.uniprot.org/uniprot/P03392|https://www.uniprot.org/uniprot/P03391|https://www.uniprot.org/uniprot/P03390|https://www.uniprot.org/uniprot/P03388|https://www.uniprot.org/uniprot/P03387|https://www.uniprot.org/uniprot/P03386|https://www.uniprot.org/uniprot/P03385|https://www.uniprot.org/uniprot/P03383|https://www.uniprot.org/uniprot/P03382|https://www.uniprot.org/uniprot/P03381|https://www.uniprot.org/uniprot/P03380|https://www.uniprot.org/uniprot/P03379|https://www.uniprot.org/uniprot/P03374|https://www.uniprot.org/uniprot/O95280|https://www.uniprot.org/uniprot/O95245|https://www.uniprot.org/uniprot/O95244|https://www.uniprot.org/uniprot/O71037|https://www.uniprot.org/uniprot/O56861|https://www.uniprot.org/uniprot/O42043|https://www.uniprot.org/uniprot/O00354|https://www.uniprot.org/uniprot/I7GPQ9|https://www.uniprot.org/uniprot/B2RPD4|https://www.uniprot.org/uniprot/A8K9G3|https://www.uniprot.org/uniprot/A1Z653|https://www.uniprot.org/uniprot/Q77YG8|https://www.uniprot.org/uniprot/Q77YG4|https://www.uniprot.org/uniprot/Q69386|https://www.uniprot.org/uniprot/Q69384|https://www.uniprot.org/uniprot/Q65597|https://www.uniprot.org/uniprot/Q64984|https://www.uniprot.org/uniprot/Q5JTS0|https://www.uniprot.org/uniprot/Q5G5D5|https://www.uniprot.org/uniprot/Q2XSV0|https://www.uniprot.org/uniprot/Q2F7J1|https://www.uniprot.org/uniprot/Q2F7I8|https://www.uniprot.org/uniprot/Q28416|https://www.uniprot.org/uniprot/Q27ID8|https://www.uniprot.org/uniprot/Q14264|https://www.uniprot.org/uniprot/Q0R5Q9|https://www.uniprot.org/uniprot/Q09SZ7|https://www.uniprot.org/uniprot/Q05312|https://www.uniprot.org/uniprot/Q04995|https://www.uniprot.org/uniprot/Q04993|https://www.uniprot.org/uniprot/Q03817|https://www.uniprot.org/uniprot/Q03816|https://www.uniprot.org/uniprot/Q03804|https://www.uniprot.org/uniprot/Q03803|https://www.uniprot.org/uniprot/Q02282|https://www.uniprot.org/uniprot/Q02077|https://www.uniprot.org/uniprot/Q02076|https://www.uniprot.org/uniprot/P90288|https://www.uniprot.org/uniprot/P61570|https://www.uniprot.org/uniprot/P61567|https://www.uniprot.org/uniprot/P61566|https://www.uniprot.org/uniprot/P61565|https://www.uniprot.org/uniprot/P61564|https://www.uniprot.org/uniprot/P61563|https://www.uniprot.org/uniprot/P61562|https://www.uniprot.org/uniprot/P61561|https://www.uniprot.org/uniprot/P61559|https://www.uniprot.org/uniprot/P61558|https://www.uniprot.org/uniprot/P61557|https://www.uniprot.org/uniprot/P61556|https://www.uniprot.org/uniprot/P61555|https://www.uniprot.org/uniprot/P61554|https://www.uniprot.org/uniprot/P61553|https://www.uniprot.org/uniprot/P61552|https://www.uniprot.org/uniprot/P61550|https://www.uniprot.org/uniprot/P60608|https://www.uniprot.org/uniprot/P60508

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T108 172-325 Sentence denotes This structure defines diffuse boundaries between buried and exposed surface protein surface, which can serve to define potential sites of vulnerability.