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PMC:7253482 / 14735-15014 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
538 142-146 Disease denotes SARS MESH:D045169
539 151-155 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T89 43-53 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T90 124-128 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T54 142-146 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T88 73-74 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 124-128 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T170 43-48 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T171 49-53 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T4 124-138 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes gene sequences http://purl.bioontology.org/ontology/MEDDRA/10069604

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T73202 0-2 TO denotes To
T86654 3-7 DT denotes that
T62840 8-11 NN denotes end
T60967 11-12 -COMMA- denotes ,
T58857 13-15 PRP denotes we
T3483 16-25 VBD denotes performed
T44308 26-28 DT denotes an
T42487 29-39 NN denotes evaluation
T38057 40-42 IN denotes of
T40313 43-53 JJ denotes amino-acid
T79756 54-69 NN denotes diversification
T74853 70-72 IN denotes on
T83914 73-74 DT denotes a
T53700 75-91 JJ denotes residue-specific
T63979 92-97 NN denotes level
T62380 97-98 -COMMA- denotes ,
T6148 99-104 VBG denotes using
T77953 105-113 RB denotes publicly
T27779 114-123 JJ denotes available
T83161 124-128 NN denotes gene
T25304 129-138 NNS denotes sequences
T83245 139-141 IN denotes of
T52371 142-146 NNP denotes SARS
T61083 147-150 CC denotes and
T72419 151-155 NNP denotes MERS
T42372 156-157 NNP denotes S
T3167 157-158 -COMMA- denotes ,
T70472 159-164 WDT denotes which
T16556 165-168 VBD denotes was
T69286 169-179 VBN denotes calculated
T52989 180-182 IN denotes as
T29326 183-186 DT denotes the
T41479 187-193 NN denotes number
T1834 194-196 IN denotes of
T51205 197-205 VBN denotes observed
T91746 206-214 JJ denotes pairwise
T46357 215-226 NNS denotes differences
T17558 227-234 VBN denotes divided
T41351 235-237 IN denotes by
T50799 238-241 DT denotes the
T28579 242-247 JJ denotes total
T58945 248-254 NN denotes number
T84292 255-257 IN denotes of
T34101 258-266 JJ denotes pairwise
T94055 267-278 NNS denotes comparisons
R28443 T3483 T73202 arg1Of performed,To
R94463 T62840 T73202 arg2Of end,To
R23741 T62840 T86654 arg1Of end,that
R3981 T3483 T60967 arg1Of performed,","
R77296 T58857 T3483 arg1Of we,performed
R90259 T42487 T3483 arg2Of evaluation,performed
R81192 T6148 T3483 arg3Of using,performed
R47190 T42487 T44308 arg1Of evaluation,an
R67380 T42487 T38057 arg1Of evaluation,of
R62100 T79756 T38057 arg2Of diversification,of
R57227 T79756 T40313 arg1Of diversification,amino-acid
R52418 T3483 T74853 arg1Of performed,on
R56816 T63979 T74853 arg2Of level,on
R76231 T63979 T83914 arg1Of level,a
R63756 T63979 T53700 arg1Of level,residue-specific
R8222 T3483 T62380 arg1Of performed,","
R72593 T58857 T6148 arg1Of we,using
R60366 T25304 T6148 arg2Of sequences,using
R1336 T27779 T77953 arg1Of available,publicly
R42703 T25304 T27779 arg1Of sequences,available
R15715 T25304 T83161 arg1Of sequences,gene
R2636 T25304 T83245 arg1Of sequences,of
R44596 T61083 T83245 arg2Of and,of
R23301 T52371 T61083 arg1Of SARS,and
R10199 T42372 T61083 arg2Of S,and
R71969 T42372 T72419 arg1Of S,MERS
R94608 T61083 T3167 arg1Of and,","
R42106 T61083 T70472 arg1Of and,which
R4990 T61083 T16556 arg1Of and,was
R6866 T69286 T16556 arg2Of calculated,was
R93854 T61083 T69286 arg2Of and,calculated
R21612 T69286 T52989 arg1Of calculated,as
R22989 T41479 T52989 arg2Of number,as
R24020 T41479 T29326 arg1Of number,the
R33105 T41479 T1834 arg1Of number,of
R21254 T46357 T1834 arg2Of differences,of
R98488 T46357 T51205 arg2Of differences,observed
R36620 T46357 T91746 arg1Of differences,pairwise
R6736 T58945 T17558 arg1Of number,divided
R51193 T46357 T17558 arg2Of differences,divided
R41505 T58945 T41351 arg2Of number,by
R58435 T58945 T50799 arg1Of number,the
R40241 T58945 T28579 arg1Of number,total
R44274 T58945 T84292 arg1Of number,of
R75794 T94055 T84292 arg2Of comparisons,of
R79922 T94055 T34101 arg1Of comparisons,pairwise

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T88 43-53 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T89 124-128 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T125 43-48 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T102 142-146 Species denotes SARS NCBItxid:694009
T103 151-155 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T88 0-279 Sentence denotes To that end, we performed an evaluation of amino-acid diversification on a residue-specific level, using publicly available gene sequences of SARS and MERS S, which was calculated as the number of observed pairwise differences divided by the total number of pairwise comparisons.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T49 142-146 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
538 142-146 Disease denotes SARS MESH:D045169
539 151-155 Disease denotes MERS MESH:D018352

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T88 0-279 Sentence denotes To that end, we performed an evaluation of amino-acid diversification on a residue-specific level, using publicly available gene sequences of SARS and MERS S, which was calculated as the number of observed pairwise differences divided by the total number of pairwise comparisons.