PMC:7253482 / 14735-15014 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7253482","sourcedb":"PMC","sourceid":"7253482","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7253482","text":"To that end, we performed an evaluation of amino-acid diversification on a residue-specific level, using publicly available gene sequences of SARS and MERS S, which was calculated as the number of observed pairwise differences divided by the total number of pairwise comparisons.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"538","span":{"begin":142,"end":146},"obj":"Disease"},{"id":"539","span":{"begin":151,"end":155},"obj":"Disease"}],"attributes":[{"id":"A538","pred":"tao:has_database_id","subj":"538","obj":"MESH:D045169"},{"id":"A539","pred":"tao:has_database_id","subj":"539","obj":"MESH:D018352"},{"subj":"538","pred":"source","obj":"LitCovid-PubTator"},{"subj":"539","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T89","span":{"begin":43,"end":53},"obj":"Body_part"},{"id":"T90","span":{"begin":124,"end":128},"obj":"Body_part"}],"attributes":[{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A90","pred":"fma_id","subj":"T90","obj":"http://purl.org/sig/ont/fma/fma74402"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T90","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T54","span":{"begin":142,"end":146},"obj":"Disease"}],"attributes":[{"id":"A54","pred":"mondo_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T54","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T88","span":{"begin":73,"end":74},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T89","span":{"begin":124,"end":128},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"attributes":[{"subj":"T88","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T170","span":{"begin":43,"end":48},"obj":"Chemical"},{"id":"T171","span":{"begin":49,"end":53},"obj":"Chemical"}],"attributes":[{"id":"A170","pred":"chebi_id","subj":"T170","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A171","pred":"chebi_id","subj":"T171","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"subj":"T170","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T171","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-MedDRA","denotations":[{"id":"T4","span":{"begin":124,"end":138},"obj":"http://purl.bioontology.org/ontology/MEDDRA/10022891"}],"attributes":[{"id":"A4","pred":"meddra_id","subj":"T4","obj":"http://purl.bioontology.org/ontology/MEDDRA/10069604"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-MedDRA"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T73202","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T86654","span":{"begin":3,"end":7},"obj":"DT"},{"id":"T62840","span":{"begin":8,"end":11},"obj":"NN"},{"id":"T60967","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T58857","span":{"begin":13,"end":15},"obj":"PRP"},{"id":"T3483","span":{"begin":16,"end":25},"obj":"VBD"},{"id":"T44308","span":{"begin":26,"end":28},"obj":"DT"},{"id":"T42487","span":{"begin":29,"end":39},"obj":"NN"},{"id":"T38057","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T40313","span":{"begin":43,"end":53},"obj":"JJ"},{"id":"T79756","span":{"begin":54,"end":69},"obj":"NN"},{"id":"T74853","span":{"begin":70,"end":72},"obj":"IN"},{"id":"T83914","span":{"begin":73,"end":74},"obj":"DT"},{"id":"T53700","span":{"begin":75,"end":91},"obj":"JJ"},{"id":"T63979","span":{"begin":92,"end":97},"obj":"NN"},{"id":"T62380","span":{"begin":97,"end":98},"obj":"-COMMA-"},{"id":"T6148","span":{"begin":99,"end":104},"obj":"VBG"},{"id":"T77953","span":{"begin":105,"end":113},"obj":"RB"},{"id":"T27779","span":{"begin":114,"end":123},"obj":"JJ"},{"id":"T83161","span":{"begin":124,"end":128},"obj":"NN"},{"id":"T25304","span":{"begin":129,"end":138},"obj":"NNS"},{"id":"T83245","span":{"begin":139,"end":141},"obj":"IN"},{"id":"T52371","span":{"begin":142,"end":146},"obj":"NNP"},{"id":"T61083","span":{"begin":147,"end":150},"obj":"CC"},{"id":"T72419","span":{"begin":151,"end":155},"obj":"NNP"},{"id":"T42372","span":{"begin":156,"end":157},"obj":"NNP"},{"id":"T3167","span":{"begin":157,"end":158},"obj":"-COMMA-"},{"id":"T70472","span":{"begin":159,"end":164},"obj":"WDT"},{"id":"T16556","span":{"begin":165,"end":168},"obj":"VBD"},{"id":"T69286","span":{"begin":169,"end":179},"obj":"VBN"},{"id":"T52989","span":{"begin":180,"end":182},"obj":"IN"},{"id":"T29326","span":{"begin":183,"end":186},"obj":"DT"},{"id":"T41479","span":{"begin":187,"end":193},"obj":"NN"},{"id":"T1834","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T51205","span":{"begin":197,"end":205},"obj":"VBN"},{"id":"T91746","span":{"begin":206,"end":214},"obj":"JJ"},{"id":"T46357","span":{"begin":215,"end":226},"obj":"NNS"},{"id":"T17558","span":{"begin":227,"end":234},"obj":"VBN"},{"id":"T41351","span":{"begin":235,"end":237},"obj":"IN"},{"id":"T50799","span":{"begin":238,"end":241},"obj":"DT"},{"id":"T28579","span":{"begin":242,"end":247},"obj":"JJ"},{"id":"T58945","span":{"begin":248,"end":254},"obj":"NN"},{"id":"T84292","span":{"begin":255,"end":257},"obj":"IN"},{"id":"T34101","span":{"begin":258,"end":266},"obj":"JJ"},{"id":"T94055","span":{"begin":267,"end":278},"obj":"NNS"}],"relations":[{"id":"R28443","pred":"arg1Of","subj":"T3483","obj":"T73202"},{"id":"R94463","pred":"arg2Of","subj":"T62840","obj":"T73202"},{"id":"R23741","pred":"arg1Of","subj":"T62840","obj":"T86654"},{"id":"R3981","pred":"arg1Of","subj":"T3483","obj":"T60967"},{"id":"R77296","pred":"arg1Of","subj":"T58857","obj":"T3483"},{"id":"R90259","pred":"arg2Of","subj":"T42487","obj":"T3483"},{"id":"R81192","pred":"arg3Of","subj":"T6148","obj":"T3483"},{"id":"R47190","pred":"arg1Of","subj":"T42487","obj":"T44308"},{"id":"R67380","pred":"arg1Of","subj":"T42487","obj":"T38057"},{"id":"R62100","pred":"arg2Of","subj":"T79756","obj":"T38057"},{"id":"R57227","pred":"arg1Of","subj":"T79756","obj":"T40313"},{"id":"R52418","pred":"arg1Of","subj":"T3483","obj":"T74853"},{"id":"R56816","pred":"arg2Of","subj":"T63979","obj":"T74853"},{"id":"R76231","pred":"arg1Of","subj":"T63979","obj":"T83914"},{"id":"R63756","pred":"arg1Of","subj":"T63979","obj":"T53700"},{"id":"R8222","pred":"arg1Of","subj":"T3483","obj":"T62380"},{"id":"R72593","pred":"arg1Of","subj":"T58857","obj":"T6148"},{"id":"R60366","pred":"arg2Of","subj":"T25304","obj":"T6148"},{"id":"R1336","pred":"arg1Of","subj":"T27779","obj":"T77953"},{"id":"R42703","pred":"arg1Of","subj":"T25304","obj":"T27779"},{"id":"R15715","pred":"arg1Of","subj":"T25304","obj":"T83161"},{"id":"R2636","pred":"arg1Of","subj":"T25304","obj":"T83245"},{"id":"R44596","pred":"arg2Of","subj":"T61083","obj":"T83245"},{"id":"R23301","pred":"arg1Of","subj":"T52371","obj":"T61083"},{"id":"R10199","pred":"arg2Of","subj":"T42372","obj":"T61083"},{"id":"R71969","pred":"arg1Of","subj":"T42372","obj":"T72419"},{"id":"R94608","pred":"arg1Of","subj":"T61083","obj":"T3167"},{"id":"R42106","pred":"arg1Of","subj":"T61083","obj":"T70472"},{"id":"R4990","pred":"arg1Of","subj":"T61083","obj":"T16556"},{"id":"R6866","pred":"arg2Of","subj":"T69286","obj":"T16556"},{"id":"R93854","pred":"arg2Of","subj":"T61083","obj":"T69286"},{"id":"R21612","pred":"arg1Of","subj":"T69286","obj":"T52989"},{"id":"R22989","pred":"arg2Of","subj":"T41479","obj":"T52989"},{"id":"R24020","pred":"arg1Of","subj":"T41479","obj":"T29326"},{"id":"R33105","pred":"arg1Of","subj":"T41479","obj":"T1834"},{"id":"R21254","pred":"arg2Of","subj":"T46357","obj":"T1834"},{"id":"R98488","pred":"arg2Of","subj":"T46357","obj":"T51205"},{"id":"R36620","pred":"arg1Of","subj":"T46357","obj":"T91746"},{"id":"R6736","pred":"arg1Of","subj":"T58945","obj":"T17558"},{"id":"R51193","pred":"arg2Of","subj":"T46357","obj":"T17558"},{"id":"R41505","pred":"arg2Of","subj":"T58945","obj":"T41351"},{"id":"R58435","pred":"arg1Of","subj":"T58945","obj":"T50799"},{"id":"R40241","pred":"arg1Of","subj":"T58945","obj":"T28579"},{"id":"R44274","pred":"arg1Of","subj":"T58945","obj":"T84292"},{"id":"R75794","pred":"arg2Of","subj":"T94055","obj":"T84292"},{"id":"R79922","pred":"arg1Of","subj":"T94055","obj":"T34101"}],"attributes":[{"subj":"T73202","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T86654","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T62840","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T60967","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T58857","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T3483","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T44308","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42487","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T38057","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T40313","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T79756","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T74853","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T83914","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T53700","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T63979","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T62380","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T6148","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T77953","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T27779","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T83161","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T25304","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T83245","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T52371","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T61083","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T72419","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42372","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T3167","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T70472","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T16556","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T69286","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T52989","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T29326","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T41479","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T1834","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T51205","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T91746","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T46357","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T17558","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T41351","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T50799","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T28579","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T58945","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T84292","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T34101","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T94055","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T88","span":{"begin":43,"end":53},"obj":"Body_part"},{"id":"T89","span":{"begin":124,"end":128},"obj":"Body_part"}],"attributes":[{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma74402"},{"subj":"T88","pred":"source","obj":"LitCovid-sample-PD-FMA"},{"subj":"T89","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T125","span":{"begin":43,"end":48},"obj":"Chemical"}],"attributes":[{"id":"A125","pred":"chebi_id","subj":"T125","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"subj":"T125","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T102","span":{"begin":142,"end":146},"obj":"Species"},{"id":"T103","span":{"begin":151,"end":155},"obj":"Species"}],"attributes":[{"id":"A102","pred":"ncbi_taxonomy_id","subj":"T102","obj":"NCBItxid:694009"},{"id":"A103","pred":"ncbi_taxonomy_id","subj":"T103","obj":"NCBItxid:1335626"},{"subj":"T102","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"},{"subj":"T103","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T88","span":{"begin":0,"end":279},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T88","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T49","span":{"begin":142,"end":146},"obj":"Disease"}],"attributes":[{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T49","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"538","span":{"begin":142,"end":146},"obj":"Disease"},{"id":"539","span":{"begin":151,"end":155},"obj":"Disease"}],"attributes":[{"id":"A538","pred":"pubann:denotes","subj":"538","obj":"MESH:D045169"},{"id":"A539","pred":"pubann:denotes","subj":"539","obj":"MESH:D018352"},{"subj":"538","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"539","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T88","span":{"begin":0,"end":279},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T88","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec93d1","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93ebec"},{"id":"LitCovid-PD-MONDO","color":"#ecd393"},{"id":"LitCovid-PD-CLO","color":"#b993ec"},{"id":"LitCovid-PD-CHEBI","color":"#93ec9f"},{"id":"LitCovid-sample-MedDRA","color":"#ec93a1"},{"id":"LitCovid-sample-Enju","color":"#93bbec"},{"id":"LitCovid-sample-PD-FMA","color":"#d5ec93"},{"id":"LitCovid-sample-CHEBI","color":"#e993ec"},{"id":"LitCovid-sample-PD-NCBITaxon","color":"#93eccf"},{"id":"LitCovid-sample-sentences","color":"#ecb593"},{"id":"LitCovid-sample-PD-MONDO","color":"#9b93ec"},{"id":"LitCovid-sample-Pubtator","color":"#a4ec93"},{"id":"LitCovid-sentences","color":"#ec93be"}]}]}}