PMC:7253482 / 14484-14734
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
537 | 184-191 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T87 | 41-51 | Body_part | denotes | amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T88 | 66-74 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T86 | 41-60 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino-acid residues |
T87 | 41-60 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino-acid residues |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T164 | 21-28 | Chemical | denotes | solvent | http://purl.obolibrary.org/obo/CHEBI_46787 |
T165 | 41-60 | Chemical | denotes | amino-acid residues | http://purl.obolibrary.org/obo/CHEBI_33708 |
T166 | 41-46 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
T167 | 47-51 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T168 | 66-74 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T169 | 184-191 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T39 | 228-232 | http://purl.obolibrary.org/obo/IDO_0000531 | denotes | host |
T40 | 233-249 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T65633 | 0-2 | PRP | denotes | We |
T71210 | 3-15 | VBD | denotes | hypothesized |
T65773 | 16-20 | IN | denotes | that |
T55109 | 21-39 | JJ | denotes | solvent-accessible |
T1585 | 39-40 | -COMMA- | denotes | , |
T39672 | 41-51 | JJ | denotes | amino-acid |
T20594 | 52-60 | NNS | denotes | residues |
T55010 | 61-63 | IN | denotes | on |
T92344 | 64-65 | NN | denotes | S |
T27449 | 66-74 | NNS | denotes | proteins |
T7753 | 75-80 | MD | denotes | would |
T87805 | 81-83 | VB | denotes | be |
T76109 | 84-94 | VBG | denotes | undergoing |
T49022 | 95-101 | JJR | denotes | higher |
T38215 | 102-107 | NNS | denotes | rates |
T48007 | 108-110 | IN | denotes | of |
T86087 | 111-120 | NNS | denotes | mutations |
T52952 | 121-129 | VBN | denotes | compared |
T99241 | 130-134 | IN | denotes | with |
T30950 | 135-141 | JJ | denotes | buried |
T25052 | 142-150 | NNS | denotes | residues |
T46492 | 151-154 | CC | denotes | and |
T57528 | 155-162 | NNS | denotes | regions |
T50177 | 163-167 | WDT | denotes | that |
T46892 | 168-171 | VBP | denotes | are |
T25102 | 172-180 | VBN | denotes | occluded |
T44481 | 181-183 | IN | denotes | by |
T18790 | 184-191 | NNS | denotes | glycans |
T48178 | 191-192 | -COMMA- | denotes | , |
T59110 | 193-198 | WDT | denotes | which |
T61432 | 199-202 | VBP | denotes | are |
T59632 | 203-209 | JJ | denotes | unable |
T87545 | 210-212 | TO | denotes | to |
T66630 | 213-215 | VB | denotes | be |
T30435 | 216-224 | VBN | denotes | targeted |
T87263 | 225-227 | IN | denotes | by |
T84547 | 228-232 | NN | denotes | host |
T42560 | 233-239 | JJ | denotes | immune |
T4934 | 240-249 | NNS | denotes | responses |
R61681 | T65633 | T71210 | arg1Of | We,hypothesized |
R96091 | T76109 | T71210 | arg2Of | undergoing,hypothesized |
R22162 | T76109 | T65773 | arg1Of | undergoing,that |
R85221 | T20594 | T55109 | arg1Of | residues,solvent-accessible |
R72861 | T55109 | T1585 | arg1Of | solvent-accessible,"," |
R77034 | T39672 | T1585 | arg2Of | amino-acid,"," |
R36891 | T20594 | T39672 | arg1Of | residues,amino-acid |
R40189 | T20594 | T55010 | arg1Of | residues,on |
R95749 | T27449 | T55010 | arg2Of | proteins,on |
R96156 | T27449 | T92344 | arg1Of | proteins,S |
R72203 | T20594 | T7753 | arg1Of | residues,would |
R54302 | T76109 | T7753 | arg2Of | undergoing,would |
R95941 | T20594 | T87805 | arg1Of | residues,be |
R17994 | T76109 | T87805 | arg2Of | undergoing,be |
R16092 | T20594 | T76109 | arg1Of | residues,undergoing |
R25200 | T38215 | T76109 | arg2Of | rates,undergoing |
R60609 | T38215 | T49022 | arg1Of | rates,higher |
R64991 | T38215 | T48007 | arg1Of | rates,of |
R81741 | T86087 | T48007 | arg2Of | mutations,of |
R95788 | T76109 | T52952 | arg1Of | undergoing,compared |
R82820 | T99241 | T52952 | arg2Of | with,compared |
R28386 | T46492 | T99241 | arg2Of | and,with |
R5522 | T46492 | T30950 | arg1Of | and,buried |
R56973 | T25052 | T46492 | arg1Of | residues,and |
R46016 | T57528 | T46492 | arg2Of | regions,and |
R56933 | T46492 | T50177 | arg1Of | and,that |
R91100 | T46492 | T46892 | arg1Of | and,are |
R37081 | T25102 | T46892 | arg2Of | occluded,are |
R26107 | T18790 | T25102 | arg1Of | glycans,occluded |
R81060 | T46492 | T25102 | arg2Of | and,occluded |
R80658 | T18790 | T44481 | arg2Of | glycans,by |
R29286 | T46492 | T48178 | arg1Of | and,"," |
R31717 | T46492 | T59110 | arg1Of | and,which |
R31827 | T46492 | T61432 | arg1Of | and,are |
R49061 | T59632 | T61432 | arg2Of | unable,are |
R61595 | T46492 | T59632 | arg1Of | and,unable |
R96524 | T30435 | T59632 | arg2Of | targeted,unable |
R23177 | T30435 | T87545 | arg1Of | targeted,to |
R28264 | T46492 | T66630 | arg1Of | and,be |
R73473 | T30435 | T66630 | arg2Of | targeted,be |
R65049 | T4934 | T30435 | arg1Of | responses,targeted |
R86135 | T46492 | T30435 | arg2Of | and,targeted |
R84142 | T4934 | T87263 | arg2Of | responses,by |
R84767 | T4934 | T84547 | arg1Of | responses,host |
R30852 | T4934 | T42560 | arg1Of | responses,immune |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T86 | 41-51 | Body_part | denotes | amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T87 | 66-74 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T122 | 41-60 | Chemical | denotes | amino-acid residues | http://purl.obolibrary.org/obo/CHEBI_33708 |
T123 | 66-74 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T124 | 184-191 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 0-250 | Sentence | denotes | We hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buried residues and regions that are occluded by glycans, which are unable to be targeted by host immune responses. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
537 | 184-191 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T3670 | 64-74 | Protein | denotes | S proteins | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T35 | 233-249 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32 | 233-249 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T36 | 233-249 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 0-250 | Sentence | denotes | We hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buried residues and regions that are occluded by glycans, which are unable to be targeted by host immune responses. |