PMC:7252096 / 22940-23339
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T97171 | 42-46 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T41870 | 108-113 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T35167 | 121-125 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T81398 | 150-154 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T49285 | 262-267 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T33426 | 342-346 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T34437 | 393-398 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T36878 | 27-32 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
| T60007 | 42-51 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell type |
| T99344 | 108-113 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T99491 | 121-130 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell type |
| T92112 | 142-143 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T35220 | 150-154 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T27389 | 262-267 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T79099 | 290-299 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes are |
| T34518 | 342-351 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell type |
| T87460 | 393-398 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T88 | 318-320 | Chemical | denotes | S4 | http://purl.obolibrary.org/obo/CHEBI_29401 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T136 | 0-75 | Sentence | denotes | (C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. |
| T137 | 76-268 | Sentence | denotes | Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. |
| T138 | 269-321 | Sentence | denotes | All cluster defining genes are provided in Table S4. |
| T139 | 322-399 | Sentence | denotes | Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 626 | 58-62 | Gene | denotes | ACE2 | Gene:59272 |
| 627 | 67-74 | Gene | denotes | TMPRSS2 | Gene:7113 |
| 628 | 379-383 | Gene | denotes | ACE2 | Gene:59272 |
| 629 | 384-391 | Gene | denotes | TMPRSS2 | Gene:7113 |