PMC:7252096 / 22940-23339 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T97171","span":{"begin":42,"end":46},"obj":"Body_part"},{"id":"T41870","span":{"begin":108,"end":113},"obj":"Body_part"},{"id":"T35167","span":{"begin":121,"end":125},"obj":"Body_part"},{"id":"T81398","span":{"begin":150,"end":154},"obj":"Body_part"},{"id":"T49285","span":{"begin":262,"end":267},"obj":"Body_part"},{"id":"T33426","span":{"begin":342,"end":346},"obj":"Body_part"},{"id":"T34437","span":{"begin":393,"end":398},"obj":"Body_part"}],"attributes":[{"id":"A73570","pred":"fma_id","subj":"T97171","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A98085","pred":"fma_id","subj":"T41870","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A25650","pred":"fma_id","subj":"T35167","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A72600","pred":"fma_id","subj":"T81398","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A42523","pred":"fma_id","subj":"T49285","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A29224","pred":"fma_id","subj":"T33426","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A26813","pred":"fma_id","subj":"T34437","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"(C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. All cluster defining genes are provided in Table S4. Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T36878","span":{"begin":27,"end":32},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T60007","span":{"begin":42,"end":51},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T99344","span":{"begin":108,"end":113},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T99491","span":{"begin":121,"end":130},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T92112","span":{"begin":142,"end":143},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T35220","span":{"begin":150,"end":154},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T27389","span":{"begin":262,"end":267},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T79099","span":{"begin":290,"end":299},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T34518","span":{"begin":342,"end":351},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T87460","span":{"begin":393,"end":398},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"(C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. All cluster defining genes are provided in Table S4. Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T88","span":{"begin":318,"end":320},"obj":"Chemical"}],"attributes":[{"id":"A88","pred":"chebi_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/CHEBI_29401"}],"text":"(C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. All cluster defining genes are provided in Table S4. Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells."}

{"project":"LitCovid-sentences","denotations":[{"id":"T136","span":{"begin":0,"end":75},"obj":"Sentence"},{"id":"T137","span":{"begin":76,"end":268},"obj":"Sentence"},{"id":"T138","span":{"begin":269,"end":321},"obj":"Sentence"},{"id":"T139","span":{"begin":322,"end":399},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"(C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. All cluster defining genes are provided in Table S4. Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells."}

{"project":"LitCovid-PubTator","denotations":[{"id":"626","span":{"begin":58,"end":62},"obj":"Gene"},{"id":"627","span":{"begin":67,"end":74},"obj":"Gene"},{"id":"628","span":{"begin":379,"end":383},"obj":"Gene"},{"id":"629","span":{"begin":384,"end":391},"obj":"Gene"}],"attributes":[{"id":"A626","pred":"tao:has_database_id","subj":"626","obj":"Gene:59272"},{"id":"A627","pred":"tao:has_database_id","subj":"627","obj":"Gene:7113"},{"id":"A628","pred":"tao:has_database_id","subj":"628","obj":"Gene:59272"},{"id":"A629","pred":"tao:has_database_id","subj":"629","obj":"Gene:7113"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"(C) Dot plot of 2 defining genes for each cell type, with ACE2 and TMPRSS2. Dot size represents fraction of cells within cell type expressing a given gene, and color intensity represents binned count-based expression amounts (log(scaled UMI+1)) among expressing cells. All cluster defining genes are provided in Table S4. Red arrow indicates cell type with largest proportion of ACE2+TMPRSS2+ cells."}