PMC:7252096 / 0-799
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T43858 | 53-57 | Body_part | denotes | Gene | http://purl.org/sig/ont/fma/fma74402 |
| T66568 | 74-90 | Body_part | denotes | Epithelial Cells | http://purl.org/sig/ont/fma/fma66768 |
| T43936 | 85-90 | Body_part | denotes | Cells | http://purl.org/sig/ont/fma/fma68646 |
| T73653 | 119-123 | Body_part | denotes | Cell | http://purl.org/sig/ont/fma/fma68646 |
| T57281 | 139-146 | Body_part | denotes | Tissues | http://purl.org/sig/ont/fma/fma9637 |
| T26168 | 353-360 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T3086 | 469-475 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T96149 | 527-531 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T2013 | 571-578 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
| T71632 | 702-706 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T11 | 707-710 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 0-8 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T2 | 0-4 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T3 | 229-262 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T4 | 284-292 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T5 | 284-288 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T6 | 322-330 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T7 | 332-340 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T8 | 332-336 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T9 | 552-560 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 552-556 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T68137 | 53-57 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Gene |
| T23666 | 61-66 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
| T35027 | 67-73 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | Airway |
| T49293 | 74-84 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | Epithelial |
| T87114 | 85-90 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cells |
| T85353 | 119-123 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
| T96846 | 527-531 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T15043 | 659-664 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T37543 | 670-675 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T21147 | 676-683 | http://purl.obolibrary.org/obo/NCBITaxon_9443 | denotes | primate |
| T70638 | 689-694 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
| T86612 | 702-706 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 353-360 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T2 | 367-378 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
| T3 | 469-475 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18072 | 209-221 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-146 | Sentence | denotes | SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues |
| T2 | 148-156 | Sentence | denotes | Abstract |
| T3 | 157-164 | Sentence | denotes | Summary |
| T4 | 165-331 | Sentence | denotes | There is pressing urgency to understand the pathogenesis of the severe acute respiratory syndrome coronavirus clade 2 (SARS-CoV-2), which causes the disease COVID-19. |
| T5 | 332-522 | Sentence | denotes | SARS-CoV-2 spike (S) protein binds angiotensin-converting enzyme 2 (ACE2), and in concert with host proteases, principally transmembrane serine protease 2 (TMPRSS2), promotes cellular entry. |
| T6 | 523-640 | Sentence | denotes | The cell subsets targeted by SARS-CoV-2 in host tissues and the factors that regulate ACE2 expression remain unknown. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 4 | 20-24 | Gene | denotes | ACE2 | Gene:59272 |
| 5 | 31-41 | Gene | denotes | Interferon | Gene:3439 |
| 6 | 0-10 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 7 | 61-66 | Species | denotes | Human | Tax:9606 |
| 35 | 343-348 | Gene | denotes | spike | Gene:43740568 |
| 36 | 350-360 | Gene | denotes | S) protein | Gene:43740568 |
| 37 | 367-398 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
| 38 | 400-404 | Gene | denotes | ACE2 | Gene:59272 |
| 39 | 455-486 | Gene | denotes | transmembrane serine protease 2 | Gene:7113 |
| 40 | 488-495 | Gene | denotes | TMPRSS2 | Gene:7113 |
| 41 | 609-613 | Gene | denotes | ACE2 | Gene:59272 |
| 47 | 229-274 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
| 48 | 284-294 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 49 | 332-342 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 50 | 552-562 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 51 | 659-664 | Species | denotes | human | Tax:9606 |
| 52 | 670-675 | Species | denotes | human | Tax:9606 |
| 53 | 689-694 | Species | denotes | mouse | Tax:10090 |
| 58 | 322-330 | Disease | denotes | COVID-19 | MESH:C000657245 |