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PMC:7247521 / 23246-23971 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
323 248-254 Gene denotes COX7A1 Gene:1346
324 324-328 Gene denotes RRM1 Gene:6240
325 396-400 Gene denotes CNR2 Gene:1269
326 470-475 Gene denotes ACSS1 Gene:84532
327 542-547 Gene denotes FFAR1 Gene:2864
328 623-630 Chemical denotes calcium MESH:D002118
329 650-654 Chemical denotes cGMP MESH:D006152
330 43-46 Disease denotes XCH
331 594-597 Disease denotes XCH

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T263 34-39 SO:0001867 denotes genes
T264 239-243 SO:0000704 denotes gene
T265 248-254 PR:000005786 denotes COX7A1
T266 315-319 SO:0000704 denotes gene
T267 324-328 PR:000014305 denotes RRM1
T268 387-391 SO:0000704 denotes gene
T269 396-400 PR:000001126 denotes CNR2
T270 461-465 SO:0000704 denotes gene
T271 470-475 PR:000003671 denotes ACSS1
T272 533-537 SO:0000704 denotes gene
T273 542-547 PR:000001582 denotes FFAR1
T274 598-605 SO:0000417 denotes modules
T275 623-648 GO:0019722 denotes calcium signaling pathway

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T64 239-243 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T65 315-319 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T66 387-391 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T67 461-465 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T68 533-537 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T153 34-39 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T154 239-243 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T155 315-319 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T156 387-391 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T157 439-441 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T158 461-465 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T159 533-537 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T160 631-640 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T161 659-668 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T131 64-67 Chemical denotes PPI http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614
T133 623-630 Chemical denotes calcium http://purl.obolibrary.org/obo/CHEBI_22984|http://purl.obolibrary.org/obo/CHEBI_29320
T135 650-654 Chemical denotes cGMP http://purl.obolibrary.org/obo/CHEBI_16356
T136 690-696 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T92 623-640 http://purl.obolibrary.org/obo/GO_0019722 denotes calcium signaling
T93 631-640 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T94 659-676 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T95 659-668 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T149 0-140 Sentence denotes At last, the potential 221 target genes of XCH were analyzed by PPI network, and the results showed that there were 166 nodes and 643 edges.
T150 141-179 Sentence denotes 5 modules scores were > 2.5 (Fig. 5E).
T151 180-196 Sentence denotes Module 1 (score:
T152 197-272 Sentence denotes 5.769) consisted of 13 nodes and the seed gene was COX7A1; Module 2 (score:
T153 273-346 Sentence denotes 2.769) consisted of 13 nodes and the seed gene was RRM1; module 3 (score:
T154 347-418 Sentence denotes 5.5) consisted of 12 nodes and the seed gene was CNR2; module 4 (score:
T155 419-493 Sentence denotes 2.909) consisted of 11 nodes and the seed gene was ACSS1; module 5 (score:
T156 494-548 Sentence denotes 3.0) consisted of 7 nodes and the seed gene was FFAR1.
T157 549-725 Sentence denotes KEGG pathway enrichment analysis showed that XCH modules were enriched in calcium signaling pathway, cGMP-PKG signaling pathway, neuroactive ligand-receptor interaction, et.al.