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PMC:7247521 / 11581-12238 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
198 49-53 Gene denotes ACE2 Gene:59272
199 58-63 Gene denotes CD147 Gene:682
200 191-195 Gene denotes ACE2 Gene:59272
201 200-205 Gene denotes CD147 Gene:682
202 423-427 Gene denotes ACE2 Gene:59272
203 315-324 Disease denotes pneumonia MESH:D011014

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T140 18-28 GO:0010467 denotes expression
T141 49-53 G_3;PG_10;PR:000003622 denotes ACE2
T142 58-63 PR:000001324 denotes CD147
T143 71-78 UBERON:0000479 denotes tissues
T144 106-113 UBERON:0000479 denotes tissues
T145 171-181 GO:0010467 denotes expression
T146 182-187 SO:0000704 denotes genes
T147 191-195 G_3;PG_10;PR:000003622 denotes ACE2
T148 200-205 PR:000001324 denotes CD147
T149 336-341 SO:0000704 denotes genes
T150 403-413 GO:0010467 denotes expression
T151 414-419 SO:0000704 denotes genes
T152 423-427 G_3;PG_10;PR:000003622 denotes ACE2
T153 431-438 UBERON:0001155;CL:0011108 denotes colonic
T154 439-449 CL:0011108;UBERON:0000483 denotes epithelial
T155 450-455 CL:0011108 denotes cells
T156 481-485 GO:0018995 denotes host

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T31 71-78 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T32 106-113 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T33 439-455 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T34 450-455 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T35 486-494 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T36 631-639 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T38 315-324 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T88 80-81 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 182-187 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T90 336-341 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T91 414-419 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T92 431-438 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colonic
T93 439-449 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T94 450-455 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T61 486-494 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T62 631-639 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T10 315-324 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T71 0-151 Sentence denotes To understand the expression and distribution of ACE2 and CD147 across tissues, a radar plot including 53 tissues was performed through COXPRESdb [24].
T72 152-246 Sentence denotes And the top 200 co-expression genes of ACE2 and CD147 (P < 1E-16) were obtained, respectively.
T73 247-386 Sentence denotes Then, text mining method from the literature was used to screen for pneumonia-associated genes through COREMINE (http://www.coremine.com/).
T74 387-530 Sentence denotes In addition, co-expression genes of ACE2 in colonic epithelial cells [25] and HCoV-associated host proteins with references [26] were obtained.
T75 531-657 Sentence denotes Finally, we performed UpsetView analysis (http://www.ehbio.com/ImageGP/) between these five sets of proteins and QFPD targets.

2_test

Id Subject Object Predicate Lexical cue
32554251-30462320-6393502 147-149 30462320 denotes 24