PMC:7239183 / 108-1632
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7239183","sourcedb":"PMC","sourceid":"7239183","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7239183","text":"Abstract\nThe current emergence of the novel coronavirus pandemic caused by SARS-CoV-2 demands the development of new therapeutic strategies to prevent rapid progress of mortalities. The coronavirus spike (S) protein, which facilitates viral attachment, entry and membrane fusion is heavily glycosylated and plays a critical role in the elicitation of the host immune response. The spike protein is comprised of two protein subunits (S1 and S2), which together possess 22 potential N-glycosylation sites. Herein, we report the glycosylation mapping on spike protein subunits S1 and S2 expressed on human cells through high resolution mass spectrometry. We have characterized the quantitative N-glycosylation profile on spike protein and interestingly, observed unexpected O-glycosylation modifications on the receptor binding domain (RBD) of spike protein subunit S1. Even though O-glycosylation has been predicted on the spike protein of SARS-CoV-2, this is the first report of experimental data for both the site of O-glycosylation and identity of the O-glycans attached on the subunit S1. Our data on the N- and O- glycosylation is strengthened by extensive manual interpretation of each glycopeptide spectra in addition to using bioinformatics tools to confirm the complexity of glycosylation in the spike protein. The elucidation of the glycan repertoire on the spike protein provides insights into the viral binding studies and more importantly, propels research towards the development of a suitable vaccine candidate.","divisions":[{"label":"title","span":{"begin":0,"end":8}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":208,"end":215},"obj":"Body_part"},{"id":"T3","span":{"begin":387,"end":394},"obj":"Body_part"},{"id":"T4","span":{"begin":415,"end":422},"obj":"Body_part"},{"id":"T5","span":{"begin":557,"end":564},"obj":"Body_part"},{"id":"T6","span":{"begin":603,"end":608},"obj":"Body_part"},{"id":"T7","span":{"begin":724,"end":731},"obj":"Body_part"},{"id":"T8","span":{"begin":847,"end":854},"obj":"Body_part"},{"id":"T9","span":{"begin":927,"end":934},"obj":"Body_part"},{"id":"T10","span":{"begin":1190,"end":1202},"obj":"Body_part"},{"id":"T11","span":{"begin":1309,"end":1316},"obj":"Body_part"},{"id":"T12","span":{"begin":1372,"end":1379},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma82784"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T2","span":{"begin":75,"end":83},"obj":"Disease"},{"id":"T3","span":{"begin":938,"end":946},"obj":"Disease"}],"attributes":[{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":263,"end":271},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T2","span":{"begin":313,"end":314},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T3","span":{"begin":433,"end":435},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T4","span":{"begin":440,"end":442},"obj":"http://purl.obolibrary.org/obo/CLO_0008922"},{"id":"T5","span":{"begin":440,"end":442},"obj":"http://purl.obolibrary.org/obo/CLO_0050052"},{"id":"T6","span":{"begin":468,"end":470},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T7","span":{"begin":574,"end":576},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T8","span":{"begin":581,"end":583},"obj":"http://purl.obolibrary.org/obo/CLO_0008922"},{"id":"T9","span":{"begin":581,"end":583},"obj":"http://purl.obolibrary.org/obo/CLO_0050052"},{"id":"T10","span":{"begin":597,"end":608},"obj":"http://purl.obolibrary.org/obo/CLO_0053065"},{"id":"T11","span":{"begin":863,"end":865},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T12","span":{"begin":895,"end":898},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T13","span":{"begin":1087,"end":1089},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T14","span":{"begin":1495,"end":1496},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":208,"end":215},"obj":"Chemical"},{"id":"T3","span":{"begin":387,"end":394},"obj":"Chemical"},{"id":"T4","span":{"begin":415,"end":422},"obj":"Chemical"},{"id":"T5","span":{"begin":440,"end":442},"obj":"Chemical"},{"id":"T6","span":{"begin":557,"end":564},"obj":"Chemical"},{"id":"T7","span":{"begin":581,"end":583},"obj":"Chemical"},{"id":"T8","span":{"begin":724,"end":731},"obj":"Chemical"},{"id":"T9","span":{"begin":847,"end":854},"obj":"Chemical"},{"id":"T10","span":{"begin":927,"end":934},"obj":"Chemical"},{"id":"T11","span":{"begin":1053,"end":1062},"obj":"Chemical"},{"id":"T12","span":{"begin":1055,"end":1062},"obj":"Chemical"},{"id":"T13","span":{"begin":1190,"end":1202},"obj":"Chemical"},{"id":"T14","span":{"begin":1309,"end":1316},"obj":"Chemical"},{"id":"T15","span":{"begin":1372,"end":1379},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_29387"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_29387"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A9","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_59521"},{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_24396"},{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-docs","denotations":[{"id":"T3","span":{"begin":263,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0061025"},{"id":"T4","span":{"begin":360,"end":375},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T5","span":{"begin":481,"end":496},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T6","span":{"begin":483,"end":496},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T7","span":{"begin":526,"end":539},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T8","span":{"begin":691,"end":706},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T9","span":{"begin":693,"end":706},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T10","span":{"begin":771,"end":786},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T11","span":{"begin":773,"end":786},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T12","span":{"begin":879,"end":894},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T13","span":{"begin":881,"end":894},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T14","span":{"begin":1017,"end":1032},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T15","span":{"begin":1019,"end":1032},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T16","span":{"begin":1114,"end":1130},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T17","span":{"begin":1117,"end":1130},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T18","span":{"begin":1282,"end":1295},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCovid-docs"},{"subj":"T4","pred":"source","obj":"LitCovid-docs"},{"subj":"T5","pred":"source","obj":"LitCovid-docs"},{"subj":"T6","pred":"source","obj":"LitCovid-docs"},{"subj":"T7","pred":"source","obj":"LitCovid-docs"},{"subj":"T8","pred":"source","obj":"LitCovid-docs"},{"subj":"T9","pred":"source","obj":"LitCovid-docs"},{"subj":"T10","pred":"source","obj":"LitCovid-docs"},{"subj":"T11","pred":"source","obj":"LitCovid-docs"},{"subj":"T12","pred":"source","obj":"LitCovid-docs"},{"subj":"T13","pred":"source","obj":"LitCovid-docs"},{"subj":"T14","pred":"source","obj":"LitCovid-docs"},{"subj":"T15","pred":"source","obj":"LitCovid-docs"},{"subj":"T16","pred":"source","obj":"LitCovid-docs"},{"subj":"T17","pred":"source","obj":"LitCovid-docs"},{"subj":"T18","pred":"source","obj":"LitCovid-docs"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T3","span":{"begin":263,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0061025"},{"id":"T4","span":{"begin":360,"end":375},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T5","span":{"begin":481,"end":496},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T6","span":{"begin":483,"end":496},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T7","span":{"begin":526,"end":539},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T8","span":{"begin":691,"end":706},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T9","span":{"begin":693,"end":706},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T10","span":{"begin":771,"end":786},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T11","span":{"begin":773,"end":786},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T12","span":{"begin":879,"end":894},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T13","span":{"begin":881,"end":894},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T14","span":{"begin":1017,"end":1032},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T15","span":{"begin":1019,"end":1032},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T16","span":{"begin":1114,"end":1130},"obj":"http://purl.obolibrary.org/obo/GO_0006493"},{"id":"T17","span":{"begin":1117,"end":1130},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T18","span":{"begin":1282,"end":1295},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T3","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T4","span":{"begin":9,"end":181},"obj":"Sentence"},{"id":"T5","span":{"begin":182,"end":376},"obj":"Sentence"},{"id":"T6","span":{"begin":377,"end":503},"obj":"Sentence"},{"id":"T7","span":{"begin":504,"end":651},"obj":"Sentence"},{"id":"T8","span":{"begin":652,"end":866},"obj":"Sentence"},{"id":"T9","span":{"begin":867,"end":1090},"obj":"Sentence"},{"id":"T10","span":{"begin":1091,"end":1317},"obj":"Sentence"},{"id":"T11","span":{"begin":1318,"end":1524},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCovid-sentences"},{"subj":"T4","pred":"source","obj":"LitCovid-sentences"},{"subj":"T5","pred":"source","obj":"LitCovid-sentences"},{"subj":"T6","pred":"source","obj":"LitCovid-sentences"},{"subj":"T7","pred":"source","obj":"LitCovid-sentences"},{"subj":"T8","pred":"source","obj":"LitCovid-sentences"},{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"25","span":{"begin":381,"end":386},"obj":"Gene"},{"id":"26","span":{"begin":551,"end":556},"obj":"Gene"},{"id":"27","span":{"begin":718,"end":723},"obj":"Gene"},{"id":"28","span":{"begin":841,"end":846},"obj":"Gene"},{"id":"29","span":{"begin":921,"end":926},"obj":"Gene"},{"id":"30","span":{"begin":1303,"end":1308},"obj":"Gene"},{"id":"31","span":{"begin":1366,"end":1371},"obj":"Gene"},{"id":"32","span":{"begin":38,"end":55},"obj":"Species"},{"id":"33","span":{"begin":75,"end":85},"obj":"Species"},{"id":"34","span":{"begin":186,"end":197},"obj":"Species"},{"id":"35","span":{"begin":597,"end":602},"obj":"Species"},{"id":"36","span":{"begin":938,"end":948},"obj":"Species"},{"id":"37","span":{"begin":481,"end":482},"obj":"Chemical"},{"id":"38","span":{"begin":691,"end":692},"obj":"Chemical"},{"id":"39","span":{"begin":1053,"end":1062},"obj":"Chemical"},{"id":"40","span":{"begin":1107,"end":1108},"obj":"Chemical"},{"id":"41","span":{"begin":1190,"end":1202},"obj":"Chemical"},{"id":"42","span":{"begin":1341,"end":1347},"obj":"Chemical"},{"id":"43","span":{"begin":169,"end":180},"obj":"Disease"}],"attributes":[{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"Gene:43740568"},{"id":"A26","pred":"tao:has_database_id","subj":"26","obj":"Gene:43740568"},{"id":"A27","pred":"tao:has_database_id","subj":"27","obj":"Gene:43740568"},{"id":"A28","pred":"tao:has_database_id","subj":"28","obj":"Gene:43740568"},{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"Gene:43740568"},{"id":"A30","pred":"tao:has_database_id","subj":"30","obj":"Gene:43740568"},{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"Gene:43740568"},{"id":"A32","pred":"tao:has_database_id","subj":"32","obj":"Tax:2697049"},{"id":"A33","pred":"tao:has_database_id","subj":"33","obj":"Tax:2697049"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"Tax:11118"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"Tax:9606"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"Tax:2697049"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"MESH:D009584"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"MESH:D009584"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"MESH:D009584"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"MESH:D006020"},{"id":"A42","pred":"tao:has_database_id","subj":"42","obj":"MESH:D011134"},{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"MESH:D003643"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"},{"subj":"26","pred":"source","obj":"LitCovid-PubTator"},{"subj":"27","pred":"source","obj":"LitCovid-PubTator"},{"subj":"28","pred":"source","obj":"LitCovid-PubTator"},{"subj":"29","pred":"source","obj":"LitCovid-PubTator"},{"subj":"30","pred":"source","obj":"LitCovid-PubTator"},{"subj":"31","pred":"source","obj":"LitCovid-PubTator"},{"subj":"32","pred":"source","obj":"LitCovid-PubTator"},{"subj":"33","pred":"source","obj":"LitCovid-PubTator"},{"subj":"34","pred":"source","obj":"LitCovid-PubTator"},{"subj":"35","pred":"source","obj":"LitCovid-PubTator"},{"subj":"36","pred":"source","obj":"LitCovid-PubTator"},{"subj":"37","pred":"source","obj":"LitCovid-PubTator"},{"subj":"38","pred":"source","obj":"LitCovid-PubTator"},{"subj":"39","pred":"source","obj":"LitCovid-PubTator"},{"subj":"40","pred":"source","obj":"LitCovid-PubTator"},{"subj":"41","pred":"source","obj":"LitCovid-PubTator"},{"subj":"42","pred":"source","obj":"LitCovid-PubTator"},{"subj":"43","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#b1ec93","default":true},{"id":"LitCovid-PD-MONDO","color":"#ec93cb"},{"id":"LitCovid-PD-CLO","color":"#93e5ec"},{"id":"LitCovid-PD-CHEBI","color":"#ecd993"},{"id":"LitCovid-docs","color":"#be93ec"},{"id":"LitCovid-PD-GO-BP","color":"#93eca4"},{"id":"LitCovid-sentences","color":"#ec939b"},{"id":"LitCovid-PubTator","color":"#93b5ec"}]}]}}