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PMC:7212965 / 94670-96020
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T234 | 434-449 | Body_part | denotes | Digestive tract | http://purl.org/sig/ont/fma/fma317863 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T193 | 434-449 | Body_part | denotes | Digestive tract | http://purl.obolibrary.org/obo/UBERON_0001555 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T449 | 50-58 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T450 | 168-176 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
T451 | 304-312 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T452 | 335-343 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
T453 | 424-432 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T454 | 540-548 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T455 | 1144-1152 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T751 | 241-246 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | label |
T752 | 321-323 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T753 | 346-348 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T754 | 374-379 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | label |
T755 | 434-449 | http://purl.obolibrary.org/obo/UBERON_0001555 | denotes | Digestive tract |
T756 | 464-467 | http://purl.obolibrary.org/obo/CLO_0001046 | denotes | 116 |
T757 | 482-485 | http://purl.obolibrary.org/obo/CLO_0001046 | denotes | 116 |
T758 | 1243-1244 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T267 | 118-120 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
T268 | 241-246 | Chemical | denotes | label | http://purl.obolibrary.org/obo/CHEBI_35209 |
T269 | 262-273 | Chemical | denotes | favipiravir | http://purl.obolibrary.org/obo/CHEBI_134722 |
T270 | 278-287 | Chemical | denotes | lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
T271 | 289-298 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
T272 | 313-315 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
T273 | 316-318 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
T274 | 374-379 | Chemical | denotes | label | http://purl.obolibrary.org/obo/CHEBI_35209 |
T275 | 388-399 | Chemical | denotes | favipiravir | http://purl.obolibrary.org/obo/CHEBI_134722 |
T276 | 403-410 | Chemical | denotes | arbidol | http://purl.obolibrary.org/obo/CHEBI_134730 |
T277 | 477-479 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
T278 | 494-503 | Chemical | denotes | Lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
T279 | 504-513 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
T280 | 687-692 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T281 | 712-717 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T282 | 736-741 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T283 | 761-766 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T284 | 785-790 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T285 | 811-816 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T286 | 826-829 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
T287 | 869-874 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T288 | 927-932 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T289 | 1068-1079 | Chemical | denotes | Chloroquine | http://purl.obolibrary.org/obo/CHEBI_3638 |
T290 | 1225-1227 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T443 | 137-152 | Phenotype | denotes | Nausea/vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
T444 | 153-167 | Phenotype | denotes | Abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
T445 | 168-176 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
T446 | 177-185 | Phenotype | denotes | Jaundice | http://purl.obolibrary.org/obo/HP_0000952 |
T447 | 335-343 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
T448 | 570-576 | Phenotype | denotes | nausea | http://purl.obolibrary.org/obo/HP_0002018 |
T449 | 584-592 | Phenotype | denotes | vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
T450 | 628-634 | Phenotype | denotes | nausea | http://purl.obolibrary.org/obo/HP_0002018 |
T451 | 649-657 | Phenotype | denotes | vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T956 | 0-68 | Sentence | denotes | Supplementary Table 2 Direct Evidence of Proposed COVID-19 Therapies |
T957 | 69-136 | Sentence | denotes | Medication class Medication Sourcea Study Design GI adverse effects |
T958 | 137-200 | Sentence | denotes | Nausea/vomiting Abdominal pain Diarrhea Jaundice Hepatotoxicity |
T959 | 201-355 | Sentence | denotes | Antiviral Favipiravir Cai, 2020109 Open-label control study (favipiravir and lopinavir/ ritonavir) for COVID-19 NR NR 2/35 (5.7%) had diarrhea 1/35 (2.9%) |
T960 | 356-493 | Sentence | denotes | Chen, 202092 Open-label RCT for favipiravir vs arbidol (n = 120) in COVID-19 “Digestive tract reactions” 16/116 (13.79%) NR 9/116 (7.76%) |
T961 | 494-830 | Sentence | denotes | Lopinavir/ritonavir Cao,89 2020 RCT in severe COVID-19 (n = 199) 10/95 with nausea + 6/96 vomiting (reported separately) vs 0/99 with nausea and 0/99 with vomiting in control 4/95 in treatment group vs 2/99 in control group 4/95 in treatment group vs 0/99 in control group 6/95 in treatment group vs. 5/99 in control group Elevated AST: |
T962 | 831-889 | Sentence | denotes | 4/95 in treatment vs. 9/99 in control group; Elevated ALT: |
T963 | 890-932 | Sentence | denotes | 2/95 in treatment vs 5/99 in control group |
T964 | 933-1054 | Sentence | denotes | Remdesivir Holshue,103 2020 Case report (first COVID in United States): remdesvir given day 7; no adverse events reported |
T965 | 1055-1205 | Sentence | denotes | Antimalarial Chloroquine Cortegiani,104 2020 Systematic review on efficacy and safety in COVID-19 Not reported in systematic review or primary studies |
T966 | 1206-1224 | Sentence | denotes | Hydroxychloroquine |
T967 | 1225-1242 | Sentence | denotes | NR, not reported. |
T968 | 1243-1304 | Sentence | denotes | a Sources include existing systematic reviews where possible. |
T969 | 1305-1350 | Sentence | denotes | If not available, primary sources are listed. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
2515 | 885-891 | Gene | denotes | ALT: 2 | Gene:84706 |
2516 | 118-120 | Gene | denotes | GI | Gene:2770 |
2517 | 278-298 | Chemical | denotes | lopinavir/ ritonavir | MESH:C558899 |
2518 | 494-513 | Chemical | denotes | Lopinavir/ritonavir | MESH:C558899 |
2519 | 933-943 | Chemical | denotes | Remdesivir | MESH:C000606551 |
2520 | 137-143 | Disease | denotes | Nausea | MESH:D009325 |
2521 | 144-200 | Disease | denotes | vomiting Abdominal pain Diarrhea Jaundice Hepatotoxicity | MESH:D015746 |
2522 | 304-312 | Disease | denotes | COVID-19 | MESH:C000657245 |
2523 | 335-343 | Disease | denotes | diarrhea | MESH:D003967 |
2524 | 424-432 | Disease | denotes | COVID-19 | MESH:C000657245 |
2525 | 540-548 | Disease | denotes | COVID-19 | MESH:C000657245 |
2526 | 570-576 | Disease | denotes | nausea | MESH:D009325 |
2527 | 584-592 | Disease | denotes | vomiting | MESH:D014839 |
2528 | 628-634 | Disease | denotes | nausea | MESH:D009325 |
2529 | 649-657 | Disease | denotes | vomiting | MESH:D014839 |
2530 | 980-985 | Disease | denotes | COVID | MESH:C000657245 |
2531 | 1144-1152 | Disease | denotes | COVID-19 | MESH:C000657245 |
2533 | 50-58 | Disease | denotes | COVID-19 | MESH:C000657245 |