> top > docs > PMC:7199903 > spans > 8524-8916 > annotations

PMC:7199903 / 8524-8916 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 129-136 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T2 146-165 https://glytoucan.org/Structures/Glycans/G64581RP denotes N-acetylglucosamine

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T47 71-78 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T48 129-136 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T49 146-165 Body_part denotes N-acetylglucosamine http://purl.org/sig/ont/fma/fma82787
T50 376-391 Body_part denotes Golgi apparatus http://purl.org/sig/ont/fma/fma63843

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T82 71-78 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T83 124-127 Chemical denotes Man http://purl.obolibrary.org/obo/CHEBI_37684
T84 129-136 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T85 138-144 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685
T87 146-165 Chemical denotes N-acetylglucosamine http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640
T89 361-368 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T43 198-203 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1411 0-3 DT denotes The
T1412 4-15 JJ denotes predominant
T1413 16-33 JJ denotes oligomannose-type
T1414 34-40 NN denotes glycan
T1415 41-50 NN denotes structure
T1416 51-59 VBN denotes observed
T1417 60-66 IN denotes across
T1418 67-70 DT denotes the
T1419 71-78 NN denotes protein
T1420 78-79 -COMMA- denotes ,
T1421 80-84 IN denotes with
T1422 85-88 DT denotes the
T1423 89-98 NN denotes exception
T1424 99-101 IN denotes of
T1425 102-106 NN denotes N234
T1426 106-107 -COMMA- denotes ,
T1427 108-110 VBZ denotes is
T1428 111-122 NN denotes Man5GlcNAc2
T1429 123-124 -LRB- denotes (
T1430 124-127 NN denotes Man
T1431 127-128 -COMMA- denotes ,
T1432 129-136 NN denotes mannose
T1433 136-137 -SEMICOLON- denotes ;
T1434 138-144 NN denotes GlcNAc
T1435 144-145 -COMMA- denotes ,
T1436 146-165 NN denotes N-acetylglucosamine
T1437 165-166 -RRB- denotes )
T1438 166-167 -COMMA- denotes ,
T1439 168-173 WDT denotes which
T1440 174-186 VBZ denotes demonstrates
T1441 187-191 IN denotes that
T1442 192-197 DT denotes these
T1443 198-203 NNS denotes sites
T1444 204-207 VBP denotes are
T1445 208-215 RB denotes largely
T1446 216-226 JJ denotes accessible
T1447 227-229 TO denotes to
T1448 230-248 NNS denotes α-1,2-mannosidases
T1449 249-252 CC denotes but
T1450 253-256 VBP denotes are
T1451 257-261 JJ denotes poor
T1452 262-272 NNS denotes substrates
T1453 273-276 IN denotes for
T1454 277-286 NN denotes GlcNAcT-I
T1455 286-287 -COMMA- denotes ,
T1456 288-293 WDT denotes which
T1457 294-296 VBZ denotes is
T1458 297-300 DT denotes the
T1459 301-308 NN denotes gateway
T1460 309-315 NN denotes enzyme
T1461 316-318 IN denotes in
T1462 319-322 DT denotes the
T1463 323-332 NN denotes formation
T1464 333-335 IN denotes of
T1465 336-343 NN denotes hybrid-
T1466 344-347 CC denotes and
T1467 348-360 JJ denotes complex-type
T1468 361-368 NNS denotes glycans
T1469 369-371 IN denotes in
T1470 372-375 DT denotes the
T1471 376-381 NNP denotes Golgi
T1472 382-391 NN denotes apparatus
R1419 T1416 T1417 arg1Of observed,across
R1420 T1419 T1417 arg2Of protein,across
R1421 T1419 T1418 arg1Of protein,the
R1422 T1416 T1420 arg1Of observed,","
R1423 T1416 T1421 arg1Of observed,with
R1424 T1423 T1421 arg2Of exception,with
R1425 T1423 T1422 arg1Of exception,the
R1426 T1423 T1424 arg1Of exception,of
R1427 T1425 T1424 arg2Of N234,of
R1428 T1427 T1426 arg1Of is,","
R1429 T1415 T1427 arg1Of structure,is
R1430 T1428 T1427 arg2Of Man5GlcNAc2,is
R1431 T1428 T1429 arg1Of Man5GlcNAc2,(
R1432 T1430 T1429 arg2Of Man,(
R1433 T1437 T1429 arg3Of ),(
R1414 T1415 T1411 arg1Of structure,The
R1415 T1415 T1412 arg1Of structure,predominant
R1416 T1415 T1413 arg1Of structure,oligomannose-type
R1417 T1415 T1414 arg1Of structure,glycan
R1418 T1415 T1416 arg2Of structure,observed
R1434 T1430 T1431 arg1Of Man,","
R1435 T1433 T1431 arg2Of ;,","
R1436 T1432 T1433 arg1Of mannose,;
R1437 T1434 T1433 arg2Of GlcNAc,;
R1438 T1430 T1435 arg1Of Man,","
R1439 T1436 T1435 arg2Of N-acetylglucosamine,","
R1440 T1428 T1438 arg1Of Man5GlcNAc2,","
R1441 T1428 T1439 arg1Of Man5GlcNAc2,which
R1442 T1428 T1440 arg1Of Man5GlcNAc2,demonstrates
R1443 T1449 T1440 arg2Of but,demonstrates
R1444 T1449 T1441 arg1Of but,that
R1445 T1443 T1442 arg1Of sites,these
R1446 T1443 T1444 arg1Of sites,are
R1447 T1446 T1444 arg2Of accessible,are
R1448 T1446 T1445 arg1Of accessible,largely
R1449 T1443 T1446 arg1Of sites,accessible
R1450 T1446 T1447 arg1Of accessible,to
R1451 T1448 T1447 arg2Of "α-1,2-mannosidases",to
R1452 T1444 T1449 arg1Of are,but
R1453 T1450 T1449 arg2Of are,but
R1454 T1443 T1450 arg1Of sites,are
R1455 T1452 T1450 arg2Of substrates,are
R1456 T1452 T1451 arg1Of substrates,poor
R1457 T1452 T1453 arg1Of substrates,for
R1458 T1454 T1453 arg2Of GlcNAcT-I,for
R1459 T1454 T1455 arg1Of GlcNAcT-I,","
R1460 T1454 T1456 arg1Of GlcNAcT-I,which
R1461 T1454 T1457 arg1Of GlcNAcT-I,is
R1462 T1460 T1457 arg2Of enzyme,is
R1463 T1460 T1458 arg1Of enzyme,the
R1464 T1460 T1459 arg1Of enzyme,gateway
R1465 T1460 T1461 arg1Of enzyme,in
R1466 T1463 T1461 arg2Of formation,in
R1467 T1463 T1462 arg1Of formation,the
R1468 T1463 T1464 arg1Of formation,of
R1469 T1468 T1464 arg2Of glycans,of
R1470 T1468 T1465 arg1Of glycans,hybrid-
R1471 T1465 T1466 arg1Of hybrid-,and
R1472 T1467 T1466 arg2Of complex-type,and
R1473 T1468 T1467 arg1Of glycans,complex-type
R1474 T1468 T1469 arg1Of glycans,in
R1475 T1472 T1469 arg2Of apparatus,in
R1476 T1472 T1470 arg1Of apparatus,the
R1477 T1472 T1471 arg1Of apparatus,Golgi

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T46 71-78 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T47 129-136 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T48 146-165 Body_part denotes N-acetylglucosamine http://purl.org/sig/ont/fma/fma82787
T49 376-391 Body_part denotes Golgi apparatus http://purl.org/sig/ont/fma/fma63843

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T61 71-78 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T62 124-127 Chemical denotes Man http://purl.obolibrary.org/obo/CHEBI_37684
T63 129-136 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T64 138-144 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685
T66 146-165 Chemical denotes N-acetylglucosamine http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640
T68 361-368 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T60 0-392 Sentence denotes The predominant oligomannose-type glycan structure observed across the protein, with the exception of N234, is Man5GlcNAc2 (Man, mannose; GlcNAc, N-acetylglucosamine), which demonstrates that these sites are largely accessible to α-1,2-mannosidases but are poor substrates for GlcNAcT-I, which is the gateway enzyme in the formation of hybrid- and complex-type glycans in the Golgi apparatus.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
276 277-286 Gene denotes GlcNAcT-I Gene:4245
286 16-28 Chemical denotes oligomannose
287 34-40 Chemical denotes glycan MESH:D011134
288 111-122 Chemical denotes Man5GlcNAc2 MESH:C058642
289 124-127 Chemical denotes Man MESH:C058642
290 129-136 Chemical denotes mannose MESH:D008358
291 138-144 Chemical denotes GlcNAc MESH:D000117
292 146-165 Chemical denotes N-acetylglucosamine MESH:D000117
293 361-368 Chemical denotes glycans MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1079 277-286 Protein denotes GlcNAcT-I https://www.uniprot.org/uniprot/O17920|https://www.uniprot.org/uniprot/O01705

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T31 323-332 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T29 323-332 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T34 323-332 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T33 124-127 https://glytoucan.org/Structures/Glycans/G70765DS denotes Man
T34 124-127 https://glytoucan.org/Structures/Glycans/G18477VG denotes Man
T35 124-127 https://glytoucan.org/Structures/Glycans/G72867LN denotes Man
T36 129-136 http://rdf.glyconavi.org/CarTNa/CarTNa218/trivialname denotes mannose
T37 138-144 https://glytoucan.org/Structures/Glycans/G26693XF denotes GlcNAc
T38 138-144 https://glytoucan.org/Structures/Glycans/G01864SU denotes GlcNAc
T39 138-144 https://glytoucan.org/Structures/Glycans/G85391SA denotes GlcNAc
T40 138-144 https://glytoucan.org/Structures/Glycans/G41950LU denotes GlcNAc
T41 138-144 https://glytoucan.org/Structures/Glycans/G57195RJ denotes GlcNAc
T42 138-144 https://glytoucan.org/Structures/Glycans/G17605FD denotes GlcNAc
T43 138-144 https://glytoucan.org/Structures/Glycans/G54644LT denotes GlcNAc
T44 138-144 https://glytoucan.org/Structures/Glycans/G89565QL denotes GlcNAc
T45 138-144 https://glytoucan.org/Structures/Glycans/G55978NL denotes GlcNAc
T46 138-144 https://glytoucan.org/Structures/Glycans/G25126RB denotes GlcNAc
T47 138-144 https://glytoucan.org/Structures/Glycans/G25694UG denotes GlcNAc
T48 138-144 https://glytoucan.org/Structures/Glycans/G80869MR denotes GlcNAc
T49 138-144 https://glytoucan.org/Structures/Glycans/G51848AD denotes GlcNAc
T50 138-144 https://glytoucan.org/Structures/Glycans/G94667GM denotes GlcNAc
T51 138-144 https://glytoucan.org/Structures/Glycans/G30124BO denotes GlcNAc
T52 138-144 https://glytoucan.org/Structures/Glycans/G82777EZ denotes GlcNAc
T53 138-144 https://glytoucan.org/Structures/Glycans/G10151YZ denotes GlcNAc
T54 138-144 https://glytoucan.org/Structures/Glycans/G17585ZM denotes GlcNAc
T55 138-144 https://glytoucan.org/Structures/Glycans/G38254HJ denotes GlcNAc
T56 138-144 https://glytoucan.org/Structures/Glycans/G04411CJ denotes GlcNAc
T57 138-144 https://glytoucan.org/Structures/Glycans/G70374VG denotes GlcNAc
T58 138-144 https://glytoucan.org/Structures/Glycans/G30874VW denotes GlcNAc
T59 138-144 https://glytoucan.org/Structures/Glycans/G45176LJ denotes GlcNAc
T60 138-144 https://glytoucan.org/Structures/Glycans/G75188FS denotes GlcNAc
T61 138-144 https://glytoucan.org/Structures/Glycans/G69333MI denotes GlcNAc
T62 138-144 https://glytoucan.org/Structures/Glycans/G10676XO denotes GlcNAc
T63 138-144 https://glytoucan.org/Structures/Glycans/G14843DJ denotes GlcNAc
T64 138-144 https://glytoucan.org/Structures/Glycans/G47546FR denotes GlcNAc
T65 138-144 https://glytoucan.org/Structures/Glycans/G73695ZM denotes GlcNAc
T66 138-144 https://glytoucan.org/Structures/Glycans/G40745NH denotes GlcNAc
T67 138-144 https://glytoucan.org/Structures/Glycans/G31923TJ denotes GlcNAc
T68 138-144 https://glytoucan.org/Structures/Glycans/G60519EP denotes GlcNAc
T69 138-144 https://glytoucan.org/Structures/Glycans/G07933IA denotes GlcNAc
T70 138-144 https://glytoucan.org/Structures/Glycans/G54496YV denotes GlcNAc
T71 138-144 https://glytoucan.org/Structures/Glycans/G70070AY denotes GlcNAc
T72 138-144 https://glytoucan.org/Structures/Glycans/G62953SQ denotes GlcNAc
T73 138-144 https://glytoucan.org/Structures/Glycans/G25238AV denotes GlcNAc
T74 138-144 https://glytoucan.org/Structures/Glycans/G40510DP denotes GlcNAc
T75 138-144 https://glytoucan.org/Structures/Glycans/G61120TK denotes GlcNAc
T76 138-144 https://glytoucan.org/Structures/Glycans/G81830JX denotes GlcNAc
T77 138-144 https://glytoucan.org/Structures/Glycans/G01591HR denotes GlcNAc
T78 138-144 https://glytoucan.org/Structures/Glycans/G90703NA denotes GlcNAc
T79 138-144 https://glytoucan.org/Structures/Glycans/G56520XN denotes GlcNAc
T80 138-144 https://glytoucan.org/Structures/Glycans/G41342KV denotes GlcNAc

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T60 0-392 Sentence denotes The predominant oligomannose-type glycan structure observed across the protein, with the exception of N234, is Man5GlcNAc2 (Man, mannose; GlcNAc, N-acetylglucosamine), which demonstrates that these sites are largely accessible to α-1,2-mannosidases but are poor substrates for GlcNAcT-I, which is the gateway enzyme in the formation of hybrid- and complex-type glycans in the Golgi apparatus.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
276 277-286 Gene denotes GlcNAcT-I Gene:4245
286 16-28 Chemical denotes oligomannose
287 34-40 Chemical denotes glycan MESH:D011134
288 111-122 Chemical denotes Man5GlcNAc2 MESH:C058642
289 124-127 Chemical denotes Man MESH:C058642
290 129-136 Chemical denotes mannose MESH:D008358
291 138-144 Chemical denotes GlcNAc MESH:D000117
292 146-165 Chemical denotes N-acetylglucosamine MESH:D000117
293 361-368 Chemical denotes glycans MESH:D011134