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PMC:7172841 / 3910-4319 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T23 95-105 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T24 238-247 Body_part denotes leukocyte http://purl.org/sig/ont/fma/fma62852
T25 267-270 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T26 283-292 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T27 365-378 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 365-378 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T45 95-125 Disease denotes macrophage-activation syndrome http://purl.obolibrary.org/obo/MONDO_0015545
T46 127-130 Disease denotes MAS http://purl.obolibrary.org/obo/MONDO_0015545

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T30 106-116 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T31 232-237 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T32 283-292 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T33 365-378 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T20 248-255 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T21 271-273 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T18 0-16 http://purl.obolibrary.org/obo/GO_0006955 denotes Immune responses
T19 95-116 http://purl.obolibrary.org/obo/GO_0042116 denotes macrophage-activation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T34 0-409 Sentence denotes Immune responses of critically ill patients with sepsis can be classified into three patterns: macrophage-activation syndrome (MAS) (Kyriazopoulou et al., 2017), sepsis-induced immunoparalysis characterized by low expression of the human leukocyte antigen D related (HLA-DR) on CD14 monocytes (Lukaszewicz et al., 2009), and an intermediate functional state of the immune system lacking obvious dysregulation.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T22 49-55 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T23 162-168 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T102 0-16 GO:0006955 denotes Immune responses
T103 95-105 CL:0000235;GO:0042116 denotes macrophage
T104 105-116 GO:0042116 denotes -activation
T105 214-224 GO:0010467 denotes expression
T106 232-237 SP_6;NCBITaxon:9606 denotes human
T107 238-247 CL:0000738 denotes leukocyte
T108 248-255 CHEBI:59132;CHEBI:59132 denotes antigen
T109 267-270 PR:000029150 denotes HLA
T110 278-282 PR:000001889 denotes CD14
T111 283-292 CL:0000576 denotes monocytes
T112 365-378 UBERON:0002405 denotes immune system
T113 395-408 GO:0065007 denotes dysregulation

2_test

Id Subject Object Predicate Lexical cue
32320677-28918754-19656930 155-159 28918754 denotes 2017
32320677-19707128-19656931 314-318 19707128 denotes 2009

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
184 278-282 Gene denotes CD14 Gene:929
188 35-43 Species denotes patients Tax:9606
195 232-237 Species denotes human Tax:9606
196 20-34 Disease denotes critically ill MESH:D016638
197 49-55 Disease denotes sepsis MESH:D018805
198 95-125 Disease denotes macrophage-activation syndrome MESH:D055501
199 162-192 Disease denotes sepsis-induced immunoparalysis MESH:D018805