PMC:7161517 / 29803-30611
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T179 | 119-123 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T180 | 171-179 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T181 | 206-219 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
T182 | 206-210 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T183 | 266-271 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T184 | 365-370 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T159 | 3-11 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T160 | 241-250 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T161 | 798-807 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T281 | 119-123 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T282 | 206-210 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T283 | 211-219 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T284 | 266-271 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T285 | 350-370 | http://purl.obolibrary.org/obo/CL_0000228 | denotes | multinucleated cells |
T286 | 387-392 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T287 | 444-449 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T288 | 604-609 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T322 | 171-179 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T78 | 155-168 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T79 | 294-303 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
T80 | 337-346 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | Formation |
T81 | 513-526 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T82 | 537-552 | http://purl.obolibrary.org/obo/GO_0019068 | denotes | virion assembly |
T83 | 637-647 | http://purl.obolibrary.org/obo/GO_0006887 | denotes | exocytosis |
T84 | 677-692 | http://purl.obolibrary.org/obo/GO_0019068 | denotes | virion assembly |
T85 | 697-707 | http://purl.obolibrary.org/obo/GO_0006887 | denotes | exocytosis |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T182 | 0-336 | Sentence | denotes | If SARS-CoV-2 does induce ACE2 ectodomain shedding, which results in the reduction of ACE2 entry sites on the infected cell, it is possible that following transcription S proteins fuse directly at the host cell membrane and directly promote infection of neighboring cells, which results in the formation of multinucleated syncytia (66). |
T183 | 337-475 | Sentence | denotes | Formation of multinucleated cells would allow the virus to spread without being detected or neutralized by virus-specific antibodies (66). |
T184 | 476-653 | Sentence | denotes | Otherwise, following replication and transcription, complete virion assembly in the Golgi would result in transportation of the virus in vesicles and release by exocytosis (66). |
T185 | 654-808 | Sentence | denotes | In the setting of full virion assembly and exocytosis, it is unclear if ACE2 ectodomain shedding would be favorable for further propagation and infection. |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T978 | 3-13 | SP_7 | denotes | SARS-CoV-2 |
T979 | 26-30 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T980 | 86-90 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T981 | 91-102 | SO:0000243 | denotes | entry sites |
T982 | 201-219 | GO:0033644 | denotes | host cell membrane |
T983 | 307-321 | GO:0005634 | denotes | multinucleated |
T984 | 337-349 | GO:0048468 | denotes | Formation of |
T985 | 350-364 | GO:0005634;CL:0000228 | denotes | multinucleated |
T986 | 365-370 | CL:0000228 | denotes | cells |
T987 | 387-392 | NCBITaxon:10239 | denotes | virus |
T988 | 444-449 | NCBITaxon:10239 | denotes | virus |
T989 | 459-469 | GO:0042571 | denotes | antibodies |
T990 | 497-508 | GO:0006260 | denotes | replication |
T991 | 537-543 | GO:0019012;GO:0019068 | denotes | virion |
T992 | 544-552 | GO:0019068 | denotes | assembly |
T993 | 560-565 | GO:0005794 | denotes | Golgi |
T994 | 604-609 | NCBITaxon:10239 | denotes | virus |
T995 | 613-621 | GO:0031982 | denotes | vesicles |
T996 | 637-647 | GO:0006887 | denotes | exocytosis |
T997 | 677-692 | GO:0019068 | denotes | virion assembly |
T998 | 697-707 | GO:0006887 | denotes | exocytosis |
T999 | 726-730 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T28163 | 3-13 | SP_7 | denotes | SARS-CoV-2 |
T43635 | 26-30 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T8828 | 86-90 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T1098 | 91-102 | SO:0000243 | denotes | entry sites |
T6321 | 201-219 | GO:0033644 | denotes | host cell membrane |
T55209 | 307-321 | GO:0005634 | denotes | multinucleated |
T36761 | 337-349 | GO:0048468 | denotes | Formation of |
T98942 | 350-364 | GO:0005634;CL:0000228 | denotes | multinucleated |
T72211 | 365-370 | CL:0000228 | denotes | cells |
T30799 | 387-392 | NCBITaxon:10239 | denotes | virus |
T11178 | 444-449 | NCBITaxon:10239 | denotes | virus |
T64611 | 459-469 | GO:0042571 | denotes | antibodies |
T23970 | 497-508 | GO:0006260 | denotes | replication |
T77931 | 537-543 | GO:0019012;GO:0019068 | denotes | virion |
T3886 | 544-552 | GO:0019068 | denotes | assembly |
T94309 | 560-565 | GO:0005794 | denotes | Golgi |
T20019 | 604-609 | NCBITaxon:10239 | denotes | virus |
T27779 | 613-621 | GO:0031982 | denotes | vesicles |
T75315 | 637-647 | GO:0006887 | denotes | exocytosis |
T94094 | 677-692 | GO:0019068 | denotes | virion assembly |
T55582 | 697-707 | GO:0006887 | denotes | exocytosis |
T20788 | 726-730 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1281 | 26-30 | Gene | denotes | ACE2 | Gene:59272 |
1282 | 86-90 | Gene | denotes | ACE2 | Gene:59272 |
1283 | 726-730 | Gene | denotes | ACE2 | Gene:59272 |
1284 | 3-13 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1285 | 110-118 | Disease | denotes | infected | MESH:D007239 |
1286 | 241-250 | Disease | denotes | infection | MESH:D007239 |
1287 | 798-807 | Disease | denotes | infection | MESH:D007239 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32305401-25720466-55252996 | 332-334 | 25720466 | denotes | 66 |
32305401-25720466-55252997 | 471-473 | 25720466 | denotes | 66 |
32305401-25720466-55252998 | 649-651 | 25720466 | denotes | 66 |