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PMC:7161517 / 29803-30611 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T179 119-123 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T180 171-179 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T181 206-219 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T182 206-210 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T183 266-271 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T184 365-370 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T159 3-11 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T160 241-250 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T161 798-807 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T281 119-123 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T282 206-210 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T283 211-219 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T284 266-271 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T285 350-370 http://purl.obolibrary.org/obo/CL_0000228 denotes multinucleated cells
T286 387-392 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T287 444-449 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T288 604-609 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T322 171-179 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T78 155-168 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T79 294-303 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T80 337-346 http://purl.obolibrary.org/obo/GO_0009058 denotes Formation
T81 513-526 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T82 537-552 http://purl.obolibrary.org/obo/GO_0019068 denotes virion assembly
T83 637-647 http://purl.obolibrary.org/obo/GO_0006887 denotes exocytosis
T84 677-692 http://purl.obolibrary.org/obo/GO_0019068 denotes virion assembly
T85 697-707 http://purl.obolibrary.org/obo/GO_0006887 denotes exocytosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T182 0-336 Sentence denotes If SARS-CoV-2 does induce ACE2 ectodomain shedding, which results in the reduction of ACE2 entry sites on the infected cell, it is possible that following transcription S proteins fuse directly at the host cell membrane and directly promote infection of neighboring cells, which results in the formation of multinucleated syncytia (66).
T183 337-475 Sentence denotes Formation of multinucleated cells would allow the virus to spread without being detected or neutralized by virus-specific antibodies (66).
T184 476-653 Sentence denotes Otherwise, following replication and transcription, complete virion assembly in the Golgi would result in transportation of the virus in vesicles and release by exocytosis (66).
T185 654-808 Sentence denotes In the setting of full virion assembly and exocytosis, it is unclear if ACE2 ectodomain shedding would be favorable for further propagation and infection.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T978 3-13 SP_7 denotes SARS-CoV-2
T979 26-30 G_3;PG_10;PR:000003622 denotes ACE2
T980 86-90 G_3;PG_10;PR:000003622 denotes ACE2
T981 91-102 SO:0000243 denotes entry sites
T982 201-219 GO:0033644 denotes host cell membrane
T983 307-321 GO:0005634 denotes multinucleated
T984 337-349 GO:0048468 denotes Formation of
T985 350-364 GO:0005634;CL:0000228 denotes multinucleated
T986 365-370 CL:0000228 denotes cells
T987 387-392 NCBITaxon:10239 denotes virus
T988 444-449 NCBITaxon:10239 denotes virus
T989 459-469 GO:0042571 denotes antibodies
T990 497-508 GO:0006260 denotes replication
T991 537-543 GO:0019012;GO:0019068 denotes virion
T992 544-552 GO:0019068 denotes assembly
T993 560-565 GO:0005794 denotes Golgi
T994 604-609 NCBITaxon:10239 denotes virus
T995 613-621 GO:0031982 denotes vesicles
T996 637-647 GO:0006887 denotes exocytosis
T997 677-692 GO:0019068 denotes virion assembly
T998 697-707 GO:0006887 denotes exocytosis
T999 726-730 G_3;PG_10;PR:000003622 denotes ACE2
T28163 3-13 SP_7 denotes SARS-CoV-2
T43635 26-30 G_3;PG_10;PR:000003622 denotes ACE2
T8828 86-90 G_3;PG_10;PR:000003622 denotes ACE2
T1098 91-102 SO:0000243 denotes entry sites
T6321 201-219 GO:0033644 denotes host cell membrane
T55209 307-321 GO:0005634 denotes multinucleated
T36761 337-349 GO:0048468 denotes Formation of
T98942 350-364 GO:0005634;CL:0000228 denotes multinucleated
T72211 365-370 CL:0000228 denotes cells
T30799 387-392 NCBITaxon:10239 denotes virus
T11178 444-449 NCBITaxon:10239 denotes virus
T64611 459-469 GO:0042571 denotes antibodies
T23970 497-508 GO:0006260 denotes replication
T77931 537-543 GO:0019012;GO:0019068 denotes virion
T3886 544-552 GO:0019068 denotes assembly
T94309 560-565 GO:0005794 denotes Golgi
T20019 604-609 NCBITaxon:10239 denotes virus
T27779 613-621 GO:0031982 denotes vesicles
T75315 637-647 GO:0006887 denotes exocytosis
T94094 677-692 GO:0019068 denotes virion assembly
T55582 697-707 GO:0006887 denotes exocytosis
T20788 726-730 G_3;PG_10;PR:000003622 denotes ACE2

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1281 26-30 Gene denotes ACE2 Gene:59272
1282 86-90 Gene denotes ACE2 Gene:59272
1283 726-730 Gene denotes ACE2 Gene:59272
1284 3-13 Species denotes SARS-CoV-2 Tax:2697049
1285 110-118 Disease denotes infected MESH:D007239
1286 241-250 Disease denotes infection MESH:D007239
1287 798-807 Disease denotes infection MESH:D007239

2_test

Id Subject Object Predicate Lexical cue
32305401-25720466-55252996 332-334 25720466 denotes 66
32305401-25720466-55252997 471-473 25720466 denotes 66
32305401-25720466-55252998 649-651 25720466 denotes 66