PMC:7153689 / 1965-3223 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7153689","sourcedb":"PMC","sourceid":"7153689","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7153689","text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"44","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"45","span":{"begin":21,"end":39},"obj":"Disease"},{"id":"46","span":{"begin":289,"end":297},"obj":"Disease"},{"id":"47","span":{"begin":330,"end":363},"obj":"Disease"},{"id":"48","span":{"begin":396,"end":428},"obj":"Disease"},{"id":"49","span":{"begin":430,"end":434},"obj":"Disease"},{"id":"50","span":{"begin":547,"end":555},"obj":"Disease"},{"id":"51","span":{"begin":569,"end":573},"obj":"Disease"},{"id":"52","span":{"begin":652,"end":657},"obj":"Disease"},{"id":"53","span":{"begin":736,"end":744},"obj":"Disease"},{"id":"54","span":{"begin":840,"end":849},"obj":"Disease"},{"id":"55","span":{"begin":864,"end":883},"obj":"Disease"},{"id":"56","span":{"begin":1109,"end":1130},"obj":"Disease"},{"id":"57","span":{"begin":1249,"end":1257},"obj":"Disease"}],"attributes":[{"id":"A44","pred":"tao:has_database_id","subj":"44","obj":"MESH:C000657245"},{"id":"A45","pred":"tao:has_database_id","subj":"45","obj":"MESH:D015047"},{"id":"A46","pred":"tao:has_database_id","subj":"46","obj":"MESH:D007239"},{"id":"A47","pred":"tao:has_database_id","subj":"47","obj":"MESH:D045169"},{"id":"A48","pred":"tao:has_database_id","subj":"48","obj":"MESH:D018352"},{"id":"A49","pred":"tao:has_database_id","subj":"49","obj":"MESH:D018352"},{"id":"A50","pred":"tao:has_database_id","subj":"50","obj":"MESH:C000657245"},{"id":"A51","pred":"tao:has_database_id","subj":"51","obj":"MESH:D018352"},{"id":"A52","pred":"tao:has_database_id","subj":"52","obj":"MESH:D005334"},{"id":"A53","pred":"tao:has_database_id","subj":"53","obj":"MESH:C000657245"},{"id":"A54","pred":"tao:has_database_id","subj":"54","obj":"MESH:D007239"},{"id":"A55","pred":"tao:has_database_id","subj":"55","obj":"MESH:D012140"},{"id":"A56","pred":"tao:has_database_id","subj":"56","obj":"MESH:D012140"},{"id":"A57","pred":"tao:has_database_id","subj":"57","obj":"MESH:C000657245"},{"subj":"44","pred":"source","obj":"LitCovid-PubTator"},{"subj":"45","pred":"source","obj":"LitCovid-PubTator"},{"subj":"46","pred":"source","obj":"LitCovid-PubTator"},{"subj":"47","pred":"source","obj":"LitCovid-PubTator"},{"subj":"48","pred":"source","obj":"LitCovid-PubTator"},{"subj":"49","pred":"source","obj":"LitCovid-PubTator"},{"subj":"50","pred":"source","obj":"LitCovid-PubTator"},{"subj":"51","pred":"source","obj":"LitCovid-PubTator"},{"subj":"52","pred":"source","obj":"LitCovid-PubTator"},{"subj":"53","pred":"source","obj":"LitCovid-PubTator"},{"subj":"54","pred":"source","obj":"LitCovid-PubTator"},{"subj":"55","pred":"source","obj":"LitCovid-PubTator"},{"subj":"56","pred":"source","obj":"LitCovid-PubTator"},{"subj":"57","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T14","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"T15","span":{"begin":21,"end":39},"obj":"Disease"},{"id":"T16","span":{"begin":30,"end":39},"obj":"Disease"},{"id":"T17","span":{"begin":330,"end":363},"obj":"Disease"},{"id":"T18","span":{"begin":365,"end":369},"obj":"Disease"},{"id":"T19","span":{"begin":547,"end":555},"obj":"Disease"},{"id":"T20","span":{"begin":560,"end":564},"obj":"Disease"},{"id":"T21","span":{"begin":736,"end":744},"obj":"Disease"},{"id":"T22","span":{"begin":840,"end":849},"obj":"Disease"},{"id":"T23","span":{"begin":1142,"end":1152},"obj":"Disease"},{"id":"T24","span":{"begin":1160,"end":1170},"obj":"Disease"},{"id":"T25","span":{"begin":1249,"end":1257},"obj":"Disease"}],"attributes":[{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0025481"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A19","pred":"mondo_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A22","pred":"mondo_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A23","pred":"mondo_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A24","pred":"mondo_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A25","pred":"mondo_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T22","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T10","span":{"begin":19,"end":20},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T11","span":{"begin":79,"end":85},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T12","span":{"begin":113,"end":119},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T13","span":{"begin":145,"end":150},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T14","span":{"begin":154,"end":159},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T15","span":{"begin":894,"end":895},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T16","span":{"begin":1090,"end":1091},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":652,"end":657},"obj":"Phenotype"},{"id":"T2","span":{"begin":758,"end":771},"obj":"Phenotype"},{"id":"T3","span":{"begin":776,"end":789},"obj":"Phenotype"},{"id":"T4","span":{"begin":864,"end":883},"obj":"Phenotype"},{"id":"T5","span":{"begin":1109,"end":1130},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0000458"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0000223"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":784,"end":789},"obj":"http://purl.obolibrary.org/obo/GO_0050909"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T15","span":{"begin":0,"end":120},"obj":"Sentence"},{"id":"T16","span":{"begin":121,"end":225},"obj":"Sentence"},{"id":"T17","span":{"begin":226,"end":302},"obj":"Sentence"},{"id":"T18","span":{"begin":303,"end":454},"obj":"Sentence"},{"id":"T19","span":{"begin":455,"end":688},"obj":"Sentence"},{"id":"T20","span":{"begin":689,"end":850},"obj":"Sentence"},{"id":"T21","span":{"begin":851,"end":1033},"obj":"Sentence"},{"id":"T22","span":{"begin":1034,"end":1258},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T15","pred":"source","obj":"LitCovid-sentences"},{"subj":"T16","pred":"source","obj":"LitCovid-sentences"},{"subj":"T17","pred":"source","obj":"LitCovid-sentences"},{"subj":"T18","pred":"source","obj":"LitCovid-sentences"},{"subj":"T19","pred":"source","obj":"LitCovid-sentences"},{"subj":"T20","pred":"source","obj":"LitCovid-sentences"},{"subj":"T21","pred":"source","obj":"LitCovid-sentences"},{"subj":"T22","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T15","span":{"begin":0,"end":8},"obj":"SP_7"},{"id":"T16","span":{"begin":79,"end":85},"obj":"NCBITaxon:33208"},{"id":"T17","span":{"begin":113,"end":119},"obj":"NCBITaxon:9606"},{"id":"T18","span":{"begin":145,"end":150},"obj":"SP_6;NCBITaxon:9606"},{"id":"T19","span":{"begin":154,"end":159},"obj":"SP_6;NCBITaxon:9606"},{"id":"T20","span":{"begin":195,"end":207},"obj":"GO:0000003"},{"id":"T21","span":{"begin":270,"end":281},"obj":"NCBITaxon:1"},{"id":"T22","span":{"begin":343,"end":354},"obj":"UBERON:0001004"},{"id":"T23","span":{"begin":365,"end":369},"obj":"SP_10"},{"id":"T24","span":{"begin":408,"end":419},"obj":"UBERON:0001004"},{"id":"T25","span":{"begin":430,"end":434},"obj":"SP_9"},{"id":"T26","span":{"begin":547,"end":555},"obj":"SP_7"},{"id":"T27","span":{"begin":560,"end":564},"obj":"SP_10"},{"id":"T28","span":{"begin":569,"end":573},"obj":"SP_9"},{"id":"T29","span":{"begin":689,"end":705},"obj":"UBERON:0005409"},{"id":"T30","span":{"begin":736,"end":744},"obj":"SP_7"},{"id":"T31","span":{"begin":784,"end":789},"obj":"GO:0050909"},{"id":"T32","span":{"begin":864,"end":875},"obj":"UBERON:0001004"},{"id":"T33","span":{"begin":1109,"end":1120},"obj":"UBERON:0001004"},{"id":"T34","span":{"begin":1249,"end":1257},"obj":"SP_7"},{"id":"T32412","span":{"begin":0,"end":8},"obj":"SP_7"},{"id":"T89963","span":{"begin":79,"end":85},"obj":"NCBITaxon:33208"},{"id":"T31781","span":{"begin":113,"end":119},"obj":"NCBITaxon:9606"},{"id":"T83144","span":{"begin":145,"end":150},"obj":"SP_6;NCBITaxon:9606"},{"id":"T63366","span":{"begin":154,"end":159},"obj":"SP_6;NCBITaxon:9606"},{"id":"T52298","span":{"begin":195,"end":207},"obj":"GO:0000003"},{"id":"T30955","span":{"begin":270,"end":281},"obj":"NCBITaxon:1"},{"id":"T70774","span":{"begin":343,"end":354},"obj":"UBERON:0001004"},{"id":"T5012","span":{"begin":365,"end":369},"obj":"SP_10"},{"id":"T74826","span":{"begin":408,"end":419},"obj":"UBERON:0001004"},{"id":"T39879","span":{"begin":430,"end":434},"obj":"SP_9"},{"id":"T29769","span":{"begin":547,"end":555},"obj":"SP_7"},{"id":"T33957","span":{"begin":560,"end":564},"obj":"SP_10"},{"id":"T77424","span":{"begin":569,"end":573},"obj":"SP_9"},{"id":"T82120","span":{"begin":689,"end":705},"obj":"UBERON:0005409"},{"id":"T33388","span":{"begin":736,"end":744},"obj":"SP_7"},{"id":"T63063","span":{"begin":784,"end":789},"obj":"GO:0050909"},{"id":"T61621","span":{"begin":864,"end":875},"obj":"UBERON:0001004"},{"id":"T21223","span":{"begin":1109,"end":1120},"obj":"UBERON:0001004"},{"id":"T65782","span":{"begin":1249,"end":1257},"obj":"SP_7"}],"attributes":[{"subj":"T15","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T16","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T17","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T18","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T19","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T20","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T21","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T22","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T23","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T24","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T25","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T26","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T27","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T28","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T29","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T30","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T31","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T32","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T33","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T34","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T32412","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T89963","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T31781","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T83144","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T63366","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T52298","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T30955","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T70774","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T5012","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T74826","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T39879","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T29769","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T33957","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T77424","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T82120","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T33388","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T63063","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T61621","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T21223","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T65782","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"2_test","denotations":[{"id":"32308536-31995857-66949959","span":{"begin":299,"end":300},"obj":"31995857"},{"id":"32308536-32369286-66949960","span":{"begin":685,"end":686},"obj":"32369286"}],"attributes":[{"subj":"32308536-31995857-66949959","pred":"source","obj":"2_test"},{"subj":"32308536-32369286-66949960","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#caec93","default":true},{"id":"LitCovid-PD-MONDO","color":"#ec93e5"},{"id":"LitCovid-PD-CLO","color":"#93ecd9"},{"id":"LitCovid-PD-HP","color":"#ecbf93"},{"id":"LitCovid-PD-GO-BP","color":"#a593ec"},{"id":"LitCovid-sentences","color":"#9aec93"},{"id":"LitCovid-PMC-OGER-BB","color":"#ec93b4"},{"id":"2_test","color":"#93ceec"}]}]}}