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PMC:7153689 / 1965-3223 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
44 0-8 Disease denotes COVID-19 MESH:C000657245
45 21-39 Disease denotes zoonotic infection MESH:D015047
46 289-297 Disease denotes infected MESH:D007239
47 330-363 Disease denotes severe acute respiratory syndrome MESH:D045169
48 396-428 Disease denotes Middle East respiratory syndrome MESH:D018352
49 430-434 Disease denotes MERS MESH:D018352
50 547-555 Disease denotes COVID-19 MESH:C000657245
51 569-573 Disease denotes MERS MESH:D018352
52 652-657 Disease denotes fever MESH:D005334
53 736-744 Disease denotes COVID-19 MESH:C000657245
54 840-849 Disease denotes infection MESH:D007239
55 864-883 Disease denotes respiratory illness MESH:D012140
56 1109-1130 Disease denotes respiratory illnesses MESH:D012140
57 1249-1257 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T14 0-8 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 21-39 Disease denotes zoonotic infection http://purl.obolibrary.org/obo/MONDO_0025481
T16 30-39 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T17 330-363 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T18 365-369 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T19 547-555 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 560-564 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T21 736-744 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 840-849 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T23 1142-1152 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T24 1160-1170 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T25 1249-1257 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 19-20 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 79-85 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T12 113-119 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T13 145-150 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T14 154-159 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T15 894-895 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 1090-1091 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 652-657 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T2 758-771 Phenotype denotes loss of smell http://purl.obolibrary.org/obo/HP_0000458
T3 776-789 Phenotype denotes loss of taste http://purl.obolibrary.org/obo/HP_0000223
T4 864-883 Phenotype denotes respiratory illness http://purl.obolibrary.org/obo/HP_0002086
T5 1109-1130 Phenotype denotes respiratory illnesses http://purl.obolibrary.org/obo/HP_0002086

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 784-789 http://purl.obolibrary.org/obo/GO_0050909 denotes taste

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T15 0-120 Sentence denotes COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans.
T16 121-225 Sentence denotes It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2.
T17 226-302 Sentence denotes In other words, for each patient, 2.2 other individuals become infected (4).
T18 303-454 Sentence denotes For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0.
T19 455-688 Sentence denotes Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5).
T20 689-850 Sentence denotes Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection.
T21 851-1033 Sentence denotes Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6).
T22 1034-1258 Sentence denotes However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T15 0-8 SP_7 denotes COVID-19
T16 79-85 NCBITaxon:33208 denotes animal
T17 113-119 NCBITaxon:9606 denotes humans
T18 145-150 SP_6;NCBITaxon:9606 denotes human
T19 154-159 SP_6;NCBITaxon:9606 denotes human
T20 195-207 GO:0000003 denotes reproductive
T21 270-281 NCBITaxon:1 denotes individuals
T22 343-354 UBERON:0001004 denotes respiratory
T23 365-369 SP_10 denotes SARS
T24 408-419 UBERON:0001004 denotes respiratory
T25 430-434 SP_9 denotes MERS
T26 547-555 SP_7 denotes COVID-19
T27 560-564 SP_10 denotes SARS
T28 569-573 SP_9 denotes MERS
T29 689-705 UBERON:0005409 denotes Gastrointestinal
T30 736-744 SP_7 denotes COVID-19
T31 784-789 GO:0050909 denotes taste
T32 864-875 UBERON:0001004 denotes respiratory
T33 1109-1120 UBERON:0001004 denotes respiratory
T34 1249-1257 SP_7 denotes COVID-19
T32412 0-8 SP_7 denotes COVID-19
T89963 79-85 NCBITaxon:33208 denotes animal
T31781 113-119 NCBITaxon:9606 denotes humans
T83144 145-150 SP_6;NCBITaxon:9606 denotes human
T63366 154-159 SP_6;NCBITaxon:9606 denotes human
T52298 195-207 GO:0000003 denotes reproductive
T30955 270-281 NCBITaxon:1 denotes individuals
T70774 343-354 UBERON:0001004 denotes respiratory
T5012 365-369 SP_10 denotes SARS
T74826 408-419 UBERON:0001004 denotes respiratory
T39879 430-434 SP_9 denotes MERS
T29769 547-555 SP_7 denotes COVID-19
T33957 560-564 SP_10 denotes SARS
T77424 569-573 SP_9 denotes MERS
T82120 689-705 UBERON:0005409 denotes Gastrointestinal
T33388 736-744 SP_7 denotes COVID-19
T63063 784-789 GO:0050909 denotes taste
T61621 864-875 UBERON:0001004 denotes respiratory
T21223 1109-1120 UBERON:0001004 denotes respiratory
T65782 1249-1257 SP_7 denotes COVID-19

2_test

Id Subject Object Predicate Lexical cue
32308536-31995857-66949959 299-300 31995857 denotes 4
32308536-32369286-66949960 685-686 32369286 denotes 5