PMC:7153689 / 1965-3223 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"44","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"45","span":{"begin":21,"end":39},"obj":"Disease"},{"id":"46","span":{"begin":289,"end":297},"obj":"Disease"},{"id":"47","span":{"begin":330,"end":363},"obj":"Disease"},{"id":"48","span":{"begin":396,"end":428},"obj":"Disease"},{"id":"49","span":{"begin":430,"end":434},"obj":"Disease"},{"id":"50","span":{"begin":547,"end":555},"obj":"Disease"},{"id":"51","span":{"begin":569,"end":573},"obj":"Disease"},{"id":"52","span":{"begin":652,"end":657},"obj":"Disease"},{"id":"53","span":{"begin":736,"end":744},"obj":"Disease"},{"id":"54","span":{"begin":840,"end":849},"obj":"Disease"},{"id":"55","span":{"begin":864,"end":883},"obj":"Disease"},{"id":"56","span":{"begin":1109,"end":1130},"obj":"Disease"},{"id":"57","span":{"begin":1249,"end":1257},"obj":"Disease"}],"attributes":[{"id":"A44","pred":"tao:has_database_id","subj":"44","obj":"MESH:C000657245"},{"id":"A45","pred":"tao:has_database_id","subj":"45","obj":"MESH:D015047"},{"id":"A46","pred":"tao:has_database_id","subj":"46","obj":"MESH:D007239"},{"id":"A47","pred":"tao:has_database_id","subj":"47","obj":"MESH:D045169"},{"id":"A48","pred":"tao:has_database_id","subj":"48","obj":"MESH:D018352"},{"id":"A49","pred":"tao:has_database_id","subj":"49","obj":"MESH:D018352"},{"id":"A50","pred":"tao:has_database_id","subj":"50","obj":"MESH:C000657245"},{"id":"A51","pred":"tao:has_database_id","subj":"51","obj":"MESH:D018352"},{"id":"A52","pred":"tao:has_database_id","subj":"52","obj":"MESH:D005334"},{"id":"A53","pred":"tao:has_database_id","subj":"53","obj":"MESH:C000657245"},{"id":"A54","pred":"tao:has_database_id","subj":"54","obj":"MESH:D007239"},{"id":"A55","pred":"tao:has_database_id","subj":"55","obj":"MESH:D012140"},{"id":"A56","pred":"tao:has_database_id","subj":"56","obj":"MESH:D012140"},{"id":"A57","pred":"tao:has_database_id","subj":"57","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T14","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"T15","span":{"begin":21,"end":39},"obj":"Disease"},{"id":"T16","span":{"begin":30,"end":39},"obj":"Disease"},{"id":"T17","span":{"begin":330,"end":363},"obj":"Disease"},{"id":"T18","span":{"begin":365,"end":369},"obj":"Disease"},{"id":"T19","span":{"begin":547,"end":555},"obj":"Disease"},{"id":"T20","span":{"begin":560,"end":564},"obj":"Disease"},{"id":"T21","span":{"begin":736,"end":744},"obj":"Disease"},{"id":"T22","span":{"begin":840,"end":849},"obj":"Disease"},{"id":"T23","span":{"begin":1142,"end":1152},"obj":"Disease"},{"id":"T24","span":{"begin":1160,"end":1170},"obj":"Disease"},{"id":"T25","span":{"begin":1249,"end":1257},"obj":"Disease"}],"attributes":[{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0025481"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A19","pred":"mondo_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A22","pred":"mondo_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A23","pred":"mondo_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A24","pred":"mondo_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A25","pred":"mondo_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T10","span":{"begin":19,"end":20},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T11","span":{"begin":79,"end":85},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T12","span":{"begin":113,"end":119},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T13","span":{"begin":145,"end":150},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T14","span":{"begin":154,"end":159},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T15","span":{"begin":894,"end":895},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T16","span":{"begin":1090,"end":1091},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":652,"end":657},"obj":"Phenotype"},{"id":"T2","span":{"begin":758,"end":771},"obj":"Phenotype"},{"id":"T3","span":{"begin":776,"end":789},"obj":"Phenotype"},{"id":"T4","span":{"begin":864,"end":883},"obj":"Phenotype"},{"id":"T5","span":{"begin":1109,"end":1130},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0000458"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0000223"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0002086"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":784,"end":789},"obj":"http://purl.obolibrary.org/obo/GO_0050909"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-sentences","denotations":[{"id":"T15","span":{"begin":0,"end":120},"obj":"Sentence"},{"id":"T16","span":{"begin":121,"end":225},"obj":"Sentence"},{"id":"T17","span":{"begin":226,"end":302},"obj":"Sentence"},{"id":"T18","span":{"begin":303,"end":454},"obj":"Sentence"},{"id":"T19","span":{"begin":455,"end":688},"obj":"Sentence"},{"id":"T20","span":{"begin":689,"end":850},"obj":"Sentence"},{"id":"T21","span":{"begin":851,"end":1033},"obj":"Sentence"},{"id":"T22","span":{"begin":1034,"end":1258},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T15","span":{"begin":0,"end":8},"obj":"SP_7"},{"id":"T16","span":{"begin":79,"end":85},"obj":"NCBITaxon:33208"},{"id":"T17","span":{"begin":113,"end":119},"obj":"NCBITaxon:9606"},{"id":"T18","span":{"begin":145,"end":150},"obj":"SP_6;NCBITaxon:9606"},{"id":"T19","span":{"begin":154,"end":159},"obj":"SP_6;NCBITaxon:9606"},{"id":"T20","span":{"begin":195,"end":207},"obj":"GO:0000003"},{"id":"T21","span":{"begin":270,"end":281},"obj":"NCBITaxon:1"},{"id":"T22","span":{"begin":343,"end":354},"obj":"UBERON:0001004"},{"id":"T23","span":{"begin":365,"end":369},"obj":"SP_10"},{"id":"T24","span":{"begin":408,"end":419},"obj":"UBERON:0001004"},{"id":"T25","span":{"begin":430,"end":434},"obj":"SP_9"},{"id":"T26","span":{"begin":547,"end":555},"obj":"SP_7"},{"id":"T27","span":{"begin":560,"end":564},"obj":"SP_10"},{"id":"T28","span":{"begin":569,"end":573},"obj":"SP_9"},{"id":"T29","span":{"begin":689,"end":705},"obj":"UBERON:0005409"},{"id":"T30","span":{"begin":736,"end":744},"obj":"SP_7"},{"id":"T31","span":{"begin":784,"end":789},"obj":"GO:0050909"},{"id":"T32","span":{"begin":864,"end":875},"obj":"UBERON:0001004"},{"id":"T33","span":{"begin":1109,"end":1120},"obj":"UBERON:0001004"},{"id":"T34","span":{"begin":1249,"end":1257},"obj":"SP_7"},{"id":"T32412","span":{"begin":0,"end":8},"obj":"SP_7"},{"id":"T89963","span":{"begin":79,"end":85},"obj":"NCBITaxon:33208"},{"id":"T31781","span":{"begin":113,"end":119},"obj":"NCBITaxon:9606"},{"id":"T83144","span":{"begin":145,"end":150},"obj":"SP_6;NCBITaxon:9606"},{"id":"T63366","span":{"begin":154,"end":159},"obj":"SP_6;NCBITaxon:9606"},{"id":"T52298","span":{"begin":195,"end":207},"obj":"GO:0000003"},{"id":"T30955","span":{"begin":270,"end":281},"obj":"NCBITaxon:1"},{"id":"T70774","span":{"begin":343,"end":354},"obj":"UBERON:0001004"},{"id":"T5012","span":{"begin":365,"end":369},"obj":"SP_10"},{"id":"T74826","span":{"begin":408,"end":419},"obj":"UBERON:0001004"},{"id":"T39879","span":{"begin":430,"end":434},"obj":"SP_9"},{"id":"T29769","span":{"begin":547,"end":555},"obj":"SP_7"},{"id":"T33957","span":{"begin":560,"end":564},"obj":"SP_10"},{"id":"T77424","span":{"begin":569,"end":573},"obj":"SP_9"},{"id":"T82120","span":{"begin":689,"end":705},"obj":"UBERON:0005409"},{"id":"T33388","span":{"begin":736,"end":744},"obj":"SP_7"},{"id":"T63063","span":{"begin":784,"end":789},"obj":"GO:0050909"},{"id":"T61621","span":{"begin":864,"end":875},"obj":"UBERON:0001004"},{"id":"T21223","span":{"begin":1109,"end":1120},"obj":"UBERON:0001004"},{"id":"T65782","span":{"begin":1249,"end":1257},"obj":"SP_7"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}

{"project":"2_test","denotations":[{"id":"32308536-31995857-66949959","span":{"begin":299,"end":300},"obj":"31995857"},{"id":"32308536-32369286-66949960","span":{"begin":685,"end":686},"obj":"32369286"}],"text":"COVID-19 is likely a zoonotic infection, which was transmitted from an unknown animal or environmental source to humans. It is now spreading via human-to-human transmission with an average basic reproductive rate (R0) of 2.2. In other words, for each patient, 2.2 other individuals become infected (4). For comparison, the R0 for severe acute respiratory syndrome (SARS) was estimated at 3.0 and Middle East respiratory syndrome (MERS) was less than 1.0. Based on the epidemiological data from Wuhan, there are several notable differences between COVID-19 and SARS and MERS: i) case fatality rates are lower; ii) asymptomatic spread can occur and iii) fever is more frequently absent (5). Gastrointestinal complaints are uncommon among COVID-19 patients but loss of smell and loss of taste have been increasingly reported as early signs of infection. Severe acute respiratory illness (SARI) is a severe complication, and typical computed tomography (CT) features include ground-glass and consolidative opacities in the periphery (6). However, it must be borne in mind that SARI can also be a manifestation of respiratory illnesses with other infectious or non-infectious causes, which need to be ruled out before attributing the presence of SARI to COVID-19."}