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PMC:7144273 / 28205-29259 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T690 95-106 NCBITaxon:11118 denotes coronavirus
T691 107-118 UBERON:0001004 denotes respiratory
T692 171-177 NCBITaxon:33208 denotes animal
T693 185-195 SP_7 denotes SARS-CoV-2
T694 196-207 GO:0006260 denotes replication
T695 236-241 SP_6;NCBITaxon:9606 denotes human
T696 242-250 NCBITaxon:9443 denotes primates
T697 276-280 NCBITaxon:10088 denotes mice
T698 363-372 UBERON:0002048 denotes pulmonary
T699 392-398 NCBITaxon:9606 denotes humans
T700 405-409 NCBITaxon:10088 denotes Mice
T701 425-430 SP_6;NCBITaxon:9606;PG_10 denotes human
T702 431-435 PG_10;PR:000003622 denotes ACE2
T703 451-461 SP_7 denotes SARS-CoV-2
T704 476-481 NCBITaxon:10239;GO:0006260 denotes virus
T705 482-493 GO:0006260 denotes replication
T706 501-506 UBERON:0000170 denotes lungs
T707 519-531 UBERON:0005169 denotes interstitial
T708 547-557 CL:0000542 denotes lymphocyte
T709 562-570 CL:0000576 denotes monocyte
T710 593-601 UBERON:0003215 denotes alveolar
T711 602-614 UBERON:0005169 denotes interstitium
T712 635-646 CL:0000235 denotes macrophages
T713 650-658 UBERON:0003215 denotes alveolar
T714 801-809 SP_7 denotes COVID-19
T715 827-832 SP_6;NCBITaxon:9606 denotes human
T716 833-840 NCBITaxon:9443 denotes primate
T717 851-861 SP_7 denotes SARS-CoV-2
T718 907-912 NCBITaxon:10239;GO:0006260 denotes viral
T719 913-924 GO:0006260 denotes replication
T720 951-957 NCBITaxon:9606 denotes humans
T64728 95-106 NCBITaxon:11118 denotes coronavirus
T29106 107-118 UBERON:0001004 denotes respiratory
T34199 171-177 NCBITaxon:33208 denotes animal
T56730 185-195 SP_7 denotes SARS-CoV-2
T60939 196-207 GO:0006260 denotes replication
T73564 236-241 SP_6;NCBITaxon:9606 denotes human
T67020 242-250 NCBITaxon:9443 denotes primates
T33050 276-280 NCBITaxon:10088 denotes mice
T83077 363-372 UBERON:0002048 denotes pulmonary
T51407 392-398 NCBITaxon:9606 denotes humans
T46136 405-409 NCBITaxon:10088 denotes Mice
T84234 425-430 SP_6;NCBITaxon:9606;PG_10 denotes human
T21387 431-435 PG_10;PR:000003622 denotes ACE2
T43200 451-461 SP_7 denotes SARS-CoV-2
T73458 476-481 NCBITaxon:10239;GO:0006260 denotes virus
T96479 482-493 GO:0006260 denotes replication
T93226 501-506 UBERON:0000170 denotes lungs
T16275 519-531 UBERON:0005169 denotes interstitial
T90152 547-557 CL:0000542 denotes lymphocyte
T98426 562-570 CL:0000576 denotes monocyte
T83444 593-601 UBERON:0003215 denotes alveolar
T98917 602-614 UBERON:0005169 denotes interstitium
T22076 635-646 CL:0000235 denotes macrophages
T13990 650-658 UBERON:0003215 denotes alveolar
T57806 801-809 SP_7 denotes COVID-19
T20689 827-832 SP_6;NCBITaxon:9606 denotes human
T38296 833-840 NCBITaxon:9443 denotes primate
T15771 851-861 SP_7 denotes SARS-CoV-2
T4203 907-912 NCBITaxon:10239;GO:0006260 denotes viral
T34570 913-924 GO:0006260 denotes replication
T99778 951-957 NCBITaxon:9606 denotes humans

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T273 501-506 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T274 547-557 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T275 562-570 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T276 593-601 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T277 602-614 Body_part denotes interstitium http://purl.org/sig/ont/fma/fma86301
T278 635-646 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T279 650-658 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T280 776-780 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T212 107-128 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T213 119-128 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T214 185-193 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T215 185-189 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T216 302-311 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T217 363-380 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T218 451-459 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T219 451-455 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T220 532-541 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T221 801-809 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T222 851-859 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T223 851-855 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T446 171-177 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T447 236-241 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T448 242-250 http://purl.obolibrary.org/obo/NCBITaxon_9443 denotes primates
T449 392-398 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T450 425-430 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T451 476-481 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T452 501-506 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T453 562-570 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T454 602-614 http://purl.obolibrary.org/obo/UBERON_0005169 denotes interstitium
T455 667-669 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T456 742-749 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T457 776-780 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T458 821-822 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T459 827-832 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T460 833-840 http://purl.obolibrary.org/obo/NCBITaxon_9443 denotes primate
T461 951-957 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T462 1009-1010 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T84 907-924 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T85 907-924 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T41 107-128 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947
T42 532-541 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

MyTest

Id Subject Object Predicate Lexical cue
32265310-20386712-29390480 400-402 20386712 denotes 44

2_test

Id Subject Object Predicate Lexical cue
32265310-20386712-29390480 400-402 20386712 denotes 44

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T125 0-184 Sentence denotes There are as yet no pre-clinical data investigating effects of MSC administration in models of coronavirus respiratory infection, mostly due to the lack of an established animal model.
T126 185-404 Sentence denotes SARS-CoV-2 replication was observed in several non-human primates and in inbred strains of mice following intranasal infection, but these models failed to show clinical signs of pulmonary disease as seen in humans [44].
T127 405-671 Sentence denotes Mice transgenic for human ACE2, infected with SARS-CoV-2, demonstrated virus replication in the lungs, as well as interstitial pneumonia with lymphocyte and monocyte infiltration into the alveolar interstitium and accumulation of macrophages in alveolar spaces [45].
T128 672-810 Sentence denotes While this model requires further evaluation, it might facilitate the testing of therapeutics including cell-based therapies for COVID-19.
T129 811-1054 Sentence denotes Recently, a non-human primate model for SARS-CoV-2 was able to reflect the same clinical signs, viral replication and pathology observed in humans, with comparable levels of mortality, and might be a valuable model for further evaluation [46].

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1003 185-195 Species denotes SARS-CoV-2 Tax:2697049
1004 236-241 Species denotes human Tax:9606
1005 276-280 Species denotes mice Tax:10090
1006 392-397 Species denotes human Tax:9606
1008 451-461 Species denotes SARS-CoV-2 Tax:2697049
1009 827-832 Species denotes human Tax:9606
1010 851-861 Species denotes SARS-CoV-2 Tax:2697049
1011 951-957 Species denotes humans Tax:9606
1012 24-32 Species denotes clinical Tax:191496
1013 345-353 Species denotes clinical Tax:191496
1014 891-899 Species denotes clinical Tax:191496
1015 95-128 Disease denotes coronavirus respiratory infection MESH:D018352
1016 302-311 Disease denotes infection MESH:D007239
1017 363-380 Disease denotes pulmonary disease MESH:D008171
1018 437-445 Disease denotes infected MESH:D007239
1019 532-541 Disease denotes pneumonia MESH:D011014
1020 801-809 Disease denotes COVID-19 MESH:C000657245
1021 985-994 Disease denotes mortality MESH:D003643