PMC:7144273 / 28205-29259
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T690 | 95-106 | NCBITaxon:11118 | denotes | coronavirus |
T691 | 107-118 | UBERON:0001004 | denotes | respiratory |
T692 | 171-177 | NCBITaxon:33208 | denotes | animal |
T693 | 185-195 | SP_7 | denotes | SARS-CoV-2 |
T694 | 196-207 | GO:0006260 | denotes | replication |
T695 | 236-241 | SP_6;NCBITaxon:9606 | denotes | human |
T696 | 242-250 | NCBITaxon:9443 | denotes | primates |
T697 | 276-280 | NCBITaxon:10088 | denotes | mice |
T698 | 363-372 | UBERON:0002048 | denotes | pulmonary |
T699 | 392-398 | NCBITaxon:9606 | denotes | humans |
T700 | 405-409 | NCBITaxon:10088 | denotes | Mice |
T701 | 425-430 | SP_6;NCBITaxon:9606;PG_10 | denotes | human |
T702 | 431-435 | PG_10;PR:000003622 | denotes | ACE2 |
T703 | 451-461 | SP_7 | denotes | SARS-CoV-2 |
T704 | 476-481 | NCBITaxon:10239;GO:0006260 | denotes | virus |
T705 | 482-493 | GO:0006260 | denotes | replication |
T706 | 501-506 | UBERON:0000170 | denotes | lungs |
T707 | 519-531 | UBERON:0005169 | denotes | interstitial |
T708 | 547-557 | CL:0000542 | denotes | lymphocyte |
T709 | 562-570 | CL:0000576 | denotes | monocyte |
T710 | 593-601 | UBERON:0003215 | denotes | alveolar |
T711 | 602-614 | UBERON:0005169 | denotes | interstitium |
T712 | 635-646 | CL:0000235 | denotes | macrophages |
T713 | 650-658 | UBERON:0003215 | denotes | alveolar |
T714 | 801-809 | SP_7 | denotes | COVID-19 |
T715 | 827-832 | SP_6;NCBITaxon:9606 | denotes | human |
T716 | 833-840 | NCBITaxon:9443 | denotes | primate |
T717 | 851-861 | SP_7 | denotes | SARS-CoV-2 |
T718 | 907-912 | NCBITaxon:10239;GO:0006260 | denotes | viral |
T719 | 913-924 | GO:0006260 | denotes | replication |
T720 | 951-957 | NCBITaxon:9606 | denotes | humans |
T64728 | 95-106 | NCBITaxon:11118 | denotes | coronavirus |
T29106 | 107-118 | UBERON:0001004 | denotes | respiratory |
T34199 | 171-177 | NCBITaxon:33208 | denotes | animal |
T56730 | 185-195 | SP_7 | denotes | SARS-CoV-2 |
T60939 | 196-207 | GO:0006260 | denotes | replication |
T73564 | 236-241 | SP_6;NCBITaxon:9606 | denotes | human |
T67020 | 242-250 | NCBITaxon:9443 | denotes | primates |
T33050 | 276-280 | NCBITaxon:10088 | denotes | mice |
T83077 | 363-372 | UBERON:0002048 | denotes | pulmonary |
T51407 | 392-398 | NCBITaxon:9606 | denotes | humans |
T46136 | 405-409 | NCBITaxon:10088 | denotes | Mice |
T84234 | 425-430 | SP_6;NCBITaxon:9606;PG_10 | denotes | human |
T21387 | 431-435 | PG_10;PR:000003622 | denotes | ACE2 |
T43200 | 451-461 | SP_7 | denotes | SARS-CoV-2 |
T73458 | 476-481 | NCBITaxon:10239;GO:0006260 | denotes | virus |
T96479 | 482-493 | GO:0006260 | denotes | replication |
T93226 | 501-506 | UBERON:0000170 | denotes | lungs |
T16275 | 519-531 | UBERON:0005169 | denotes | interstitial |
T90152 | 547-557 | CL:0000542 | denotes | lymphocyte |
T98426 | 562-570 | CL:0000576 | denotes | monocyte |
T83444 | 593-601 | UBERON:0003215 | denotes | alveolar |
T98917 | 602-614 | UBERON:0005169 | denotes | interstitium |
T22076 | 635-646 | CL:0000235 | denotes | macrophages |
T13990 | 650-658 | UBERON:0003215 | denotes | alveolar |
T57806 | 801-809 | SP_7 | denotes | COVID-19 |
T20689 | 827-832 | SP_6;NCBITaxon:9606 | denotes | human |
T38296 | 833-840 | NCBITaxon:9443 | denotes | primate |
T15771 | 851-861 | SP_7 | denotes | SARS-CoV-2 |
T4203 | 907-912 | NCBITaxon:10239;GO:0006260 | denotes | viral |
T34570 | 913-924 | GO:0006260 | denotes | replication |
T99778 | 951-957 | NCBITaxon:9606 | denotes | humans |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T273 | 501-506 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
T274 | 547-557 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
T275 | 562-570 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
T276 | 593-601 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
T277 | 602-614 | Body_part | denotes | interstitium | http://purl.org/sig/ont/fma/fma86301 |
T278 | 635-646 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
T279 | 650-658 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
T280 | 776-780 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T212 | 107-128 | Disease | denotes | respiratory infection | http://purl.obolibrary.org/obo/MONDO_0024355 |
T213 | 119-128 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T214 | 185-193 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T215 | 185-189 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T216 | 302-311 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T217 | 363-380 | Disease | denotes | pulmonary disease | http://purl.obolibrary.org/obo/MONDO_0005275 |
T218 | 451-459 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T219 | 451-455 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T220 | 532-541 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T221 | 801-809 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T222 | 851-859 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T223 | 851-855 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T446 | 171-177 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
T447 | 236-241 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T448 | 242-250 | http://purl.obolibrary.org/obo/NCBITaxon_9443 | denotes | primates |
T449 | 392-398 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T450 | 425-430 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T451 | 476-481 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T452 | 501-506 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
T453 | 562-570 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
T454 | 602-614 | http://purl.obolibrary.org/obo/UBERON_0005169 | denotes | interstitium |
T455 | 667-669 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 45 |
T456 | 742-749 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T457 | 776-780 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T458 | 821-822 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T459 | 827-832 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T460 | 833-840 | http://purl.obolibrary.org/obo/NCBITaxon_9443 | denotes | primate |
T461 | 951-957 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T462 | 1009-1010 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T84 | 907-924 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
T85 | 907-924 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T41 | 107-128 | Phenotype | denotes | respiratory infection | http://purl.obolibrary.org/obo/HP_0011947 |
T42 | 532-541 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32265310-20386712-29390480 | 400-402 | 20386712 | denotes | 44 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32265310-20386712-29390480 | 400-402 | 20386712 | denotes | 44 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T125 | 0-184 | Sentence | denotes | There are as yet no pre-clinical data investigating effects of MSC administration in models of coronavirus respiratory infection, mostly due to the lack of an established animal model. |
T126 | 185-404 | Sentence | denotes | SARS-CoV-2 replication was observed in several non-human primates and in inbred strains of mice following intranasal infection, but these models failed to show clinical signs of pulmonary disease as seen in humans [44]. |
T127 | 405-671 | Sentence | denotes | Mice transgenic for human ACE2, infected with SARS-CoV-2, demonstrated virus replication in the lungs, as well as interstitial pneumonia with lymphocyte and monocyte infiltration into the alveolar interstitium and accumulation of macrophages in alveolar spaces [45]. |
T128 | 672-810 | Sentence | denotes | While this model requires further evaluation, it might facilitate the testing of therapeutics including cell-based therapies for COVID-19. |
T129 | 811-1054 | Sentence | denotes | Recently, a non-human primate model for SARS-CoV-2 was able to reflect the same clinical signs, viral replication and pathology observed in humans, with comparable levels of mortality, and might be a valuable model for further evaluation [46]. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1003 | 185-195 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1004 | 236-241 | Species | denotes | human | Tax:9606 |
1005 | 276-280 | Species | denotes | mice | Tax:10090 |
1006 | 392-397 | Species | denotes | human | Tax:9606 |
1008 | 451-461 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1009 | 827-832 | Species | denotes | human | Tax:9606 |
1010 | 851-861 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1011 | 951-957 | Species | denotes | humans | Tax:9606 |
1012 | 24-32 | Species | denotes | clinical | Tax:191496 |
1013 | 345-353 | Species | denotes | clinical | Tax:191496 |
1014 | 891-899 | Species | denotes | clinical | Tax:191496 |
1015 | 95-128 | Disease | denotes | coronavirus respiratory infection | MESH:D018352 |
1016 | 302-311 | Disease | denotes | infection | MESH:D007239 |
1017 | 363-380 | Disease | denotes | pulmonary disease | MESH:D008171 |
1018 | 437-445 | Disease | denotes | infected | MESH:D007239 |
1019 | 532-541 | Disease | denotes | pneumonia | MESH:D011014 |
1020 | 801-809 | Disease | denotes | COVID-19 | MESH:C000657245 |
1021 | 985-994 | Disease | denotes | mortality | MESH:D003643 |