PMC:7143707 / 3445-4025
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 68 | 166-173 | Species | denotes | patient | Tax:9606 |
| 69 | 455-467 | Species | denotes | C. difficile | Tax:1496 |
| 70 | 474-484 | Chemical | denotes | vancomycin | MESH:D014640 |
| 71 | 515-525 | Chemical | denotes | carbepenum | |
| 72 | 42-51 | Disease | denotes | infection | MESH:D007239 |
| 73 | 84-92 | Disease | denotes | infected | MESH:D007239 |
| 74 | 318-325 | Disease | denotes | vomitus | |
| 75 | 327-335 | Disease | denotes | diarrhea | MESH:D003967 |
| 76 | 551-555 | Disease | denotes | SARS | MESH:D045169 |
| 77 | 561-565 | Disease | denotes | MERS | MESH:D018352 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T3 | 55-59 | Body_part | denotes | skin | http://purl.org/sig/ont/fma/fma7163 |
| T4 | 63-67 | Body_part | denotes | skin | http://purl.org/sig/ont/fma/fma7163 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T2 | 55-59 | Body_part | denotes | skin | http://purl.obolibrary.org/obo/UBERON_0000014 |
| T3 | 63-67 | Body_part | denotes | skin | http://purl.obolibrary.org/obo/UBERON_0000014 |
| T4 | 303-316 | Body_part | denotes | bodily fluids | http://purl.obolibrary.org/obo/UBERON_0006314 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T20 | 42-51 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T21 | 262-267 | Disease | denotes | Wound | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T22 | 327-335 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T23 | 449-453 | Disease | denotes | MRSA | http://purl.obolibrary.org/obo/MONDO_0100073 |
| T24 | 551-555 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T31 | 55-59 | http://purl.obolibrary.org/obo/UBERON_0000014 | denotes | skin |
| T32 | 55-59 | http://purl.obolibrary.org/obo/UBERON_0001003 | denotes | skin |
| T33 | 55-59 | http://purl.obolibrary.org/obo/UBERON_0002097 | denotes | skin |
| T34 | 55-59 | http://purl.obolibrary.org/obo/UBERON_0002199 | denotes | skin |
| T35 | 55-59 | http://www.ebi.ac.uk/efo/EFO_0000962 | denotes | skin |
| T36 | 63-67 | http://purl.obolibrary.org/obo/UBERON_0000014 | denotes | skin |
| T37 | 63-67 | http://purl.obolibrary.org/obo/UBERON_0001003 | denotes | skin |
| T38 | 63-67 | http://purl.obolibrary.org/obo/UBERON_0002097 | denotes | skin |
| T39 | 63-67 | http://purl.obolibrary.org/obo/UBERON_0002199 | denotes | skin |
| T40 | 63-67 | http://www.ebi.ac.uk/efo/EFO_0000962 | denotes | skin |
| T41 | 140-141 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T42 | 303-316 | http://purl.obolibrary.org/obo/UBERON_0006314 | denotes | bodily fluids |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T9 | 202-204 | Chemical | denotes | TV | http://purl.obolibrary.org/obo/CHEBI_75193 |
| T10 | 474-484 | Chemical | denotes | vancomycin | http://purl.obolibrary.org/obo/CHEBI_28001|http://purl.obolibrary.org/obo/CHEBI_76842 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 289-299 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretions |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T3 | 327-335 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 0-25 | Sentence | denotes | 4 Contact transmission11 |
| T26 | 26-261 | Sentence | denotes | Transmission of infection by skin-to-skin contact with an infected person, or by touching contaminated items from a person's room (fomites: patient care equipment, telephones, TV remote controls, countertops, as well as bedding, etc.). |
| T27 | 262-383 | Sentence | denotes | Wound drainage, as well as secretions or bodily fluids (vomitus, diarrhea, etc.) increase risks for contact transmission. |
| T28 | 384-580 | Sentence | denotes | Some notable pathogens transmitted by contact include norovirus, MRSA, C. difficile, VRE (vancomycin resistant enterococcus), CRE (carbepenum-resistant enterococcus), SARS, and MERS, among others. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45 | 93-99 | NCBITaxon:9606 | denotes | person |
| T46 | 142-148 | NCBITaxon:9606 | denotes | person |
| T47 | 303-316 | UBERON:0006314 | denotes | bodily fluids |
| T48 | 318-325 | UBERON:0000916 | denotes | vomitus |
| T49 | 438-447 | NCBITaxon:10116 | denotes | norovirus |
| T50 | 455-457 | NCBITaxon:7719 | denotes | C. |
| T51 | 458-467 | NCBITaxon:40922 | denotes | difficile |
| T52 | 474-484 | CHEBI:28001;CHEBI:28001 | denotes | vancomycin |
| T53 | 551-555 | SP_10 | denotes | SARS |
| T54 | 561-565 | SP_9 | denotes | MERS |