PMC:7115396 / 27734-29292 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7115396","sourcedb":"PMC","sourceid":"7115396","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7115396","text":"3.3.1 Efficacy of the different vaccines against QX-like IBV challenge in SPF chickens\nThe rH120-S1/YZ group exhibited effective protection against challenge with the QX-like strain rIBYZ. The mortality rate in the rH120-S1/YZ group was 0%, and no clinical signs or lesions were observed during the rIBYZ challenge period (Fig. 7 A). In contrast, chickens vaccinated with the rH120 strain began to exhibit clinical signs (e.g., coughing and nasal discharge) at 3 days post-challenge (dpc), and some chickens showed severe signs of listlessness, huddling, and ruffled feathers, with the mortality rate reaching 50% during the observation period. At necropsy, the dead animals displayed typical kidney lesions characterized by swelling and urate deposition in the tubules and ureters. In contrast to chickens vaccinated with rH120-S1/YZ, the chickens in the unvaccinated control group exhibited clinical signs at 3 dpc, and a 60% mortality rate; the gross lesions of the dead birds in this group were similar to that of the rH120 group (Fig. 7B).\nFig. 7 Efficacy of the rH120 and rH120-S1/YZ vaccines. (A) Percent survival of the vaccinated chickens challenged with the QX-like IBV rIBYZ strain during the 14-day observation period. No mortality was observed in the chickens vaccinated with the rH120-S1/YZ strain. (B) Gross lesions observed on the kidneys of the vaccinated chickens challenged with the rIBYZ strain at 5 or 7 dpc. (C) The mean antibody OD value at 7, 14, 21, and 28 dpv. All data are presented as the mean ± standard error of the mean (SEM).","divisions":[{"label":"label","span":{"begin":0,"end":5}},{"label":"title","span":{"begin":7,"end":87}},{"label":"label","span":{"begin":1046,"end":1052}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T149","span":{"begin":694,"end":700},"obj":"Body_part"},{"id":"T150","span":{"begin":775,"end":782},"obj":"Body_part"},{"id":"T151","span":{"begin":1348,"end":1355},"obj":"Body_part"},{"id":"T152","span":{"begin":1444,"end":1452},"obj":"Body_part"}],"attributes":[{"id":"A149","pred":"fma_id","subj":"T149","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A150","pred":"fma_id","subj":"T150","obj":"http://purl.org/sig/ont/fma/fma9704"},{"id":"A151","pred":"fma_id","subj":"T151","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A152","pred":"fma_id","subj":"T152","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T150","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T151","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T152","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T56","span":{"begin":694,"end":700},"obj":"Body_part"}],"attributes":[{"id":"A56","pred":"uberon_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T35","span":{"begin":1453,"end":1455},"obj":"Disease"}],"attributes":[{"id":"A35","pred":"mondo_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/MONDO_0017178"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T410","span":{"begin":79,"end":87},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T411","span":{"begin":98,"end":100},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T412","span":{"begin":222,"end":224},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T413","span":{"begin":331,"end":332},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T414","span":{"begin":348,"end":356},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T415","span":{"begin":500,"end":508},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T416","span":{"begin":668,"end":675},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T417","span":{"begin":694,"end":700},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T418","span":{"begin":694,"end":700},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T419","span":{"begin":694,"end":700},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T420","span":{"begin":775,"end":782},"obj":"http://purl.obolibrary.org/obo/UBERON_0000056"},{"id":"T421","span":{"begin":799,"end":807},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T422","span":{"begin":830,"end":832},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T423","span":{"begin":841,"end":852},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T424","span":{"begin":923,"end":924},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T425","span":{"begin":1085,"end":1087},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T426","span":{"begin":1102,"end":1103},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T427","span":{"begin":1140,"end":1148},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T428","span":{"begin":1265,"end":1273},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T429","span":{"begin":1300,"end":1302},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T430","span":{"begin":1315,"end":1316},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T431","span":{"begin":1348,"end":1355},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T432","span":{"begin":1348,"end":1355},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T433","span":{"begin":1348,"end":1355},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T434","span":{"begin":1374,"end":1382},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"}],"attributes":[{"subj":"T410","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T411","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T412","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T413","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T414","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T415","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T416","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T417","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T418","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T419","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T420","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T421","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T422","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T423","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T424","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T425","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T426","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T427","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T428","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T429","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T430","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T431","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T432","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T433","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T434","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T87","span":{"begin":75,"end":78},"obj":"Chemical"},{"id":"T88","span":{"begin":104,"end":109},"obj":"Chemical"},{"id":"T89","span":{"begin":228,"end":233},"obj":"Chemical"},{"id":"T90","span":{"begin":739,"end":744},"obj":"Chemical"},{"id":"T91","span":{"begin":878,"end":883},"obj":"Chemical"},{"id":"T92","span":{"begin":989,"end":994},"obj":"Chemical"},{"id":"T93","span":{"begin":1029,"end":1034},"obj":"Chemical"}],"attributes":[{"id":"A87","pred":"chebi_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/CHEBI_88542"},{"id":"A88","pred":"chebi_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A89","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A90","pred":"chebi_id","subj":"T90","obj":"http://purl.obolibrary.org/obo/CHEBI_17775"},{"id":"A91","pred":"chebi_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A92","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A93","pred":"chebi_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"subj":"T87","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T88","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T90","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T91","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T92","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T194","span":{"begin":0,"end":87},"obj":"Sentence"},{"id":"T195","span":{"begin":88,"end":189},"obj":"Sentence"},{"id":"T196","span":{"begin":190,"end":334},"obj":"Sentence"},{"id":"T197","span":{"begin":335,"end":645},"obj":"Sentence"},{"id":"T198","span":{"begin":646,"end":783},"obj":"Sentence"},{"id":"T199","span":{"begin":784,"end":1045},"obj":"Sentence"},{"id":"T200","span":{"begin":1046,"end":1231},"obj":"Sentence"},{"id":"T201","span":{"begin":1232,"end":1487},"obj":"Sentence"},{"id":"T202","span":{"begin":1488,"end":1558},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T194","pred":"source","obj":"LitCovid-sentences"},{"subj":"T195","pred":"source","obj":"LitCovid-sentences"},{"subj":"T196","pred":"source","obj":"LitCovid-sentences"},{"subj":"T197","pred":"source","obj":"LitCovid-sentences"},{"subj":"T198","pred":"source","obj":"LitCovid-sentences"},{"subj":"T199","pred":"source","obj":"LitCovid-sentences"},{"subj":"T200","pred":"source","obj":"LitCovid-sentences"},{"subj":"T201","pred":"source","obj":"LitCovid-sentences"},{"subj":"T202","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T18","span":{"begin":429,"end":437},"obj":"Phenotype"},{"id":"T19","span":{"begin":442,"end":457},"obj":"Phenotype"}],"attributes":[{"id":"A18","pred":"hp_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A19","pred":"hp_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/HP_0031417"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"411","span":{"begin":58,"end":61},"obj":"Species"},{"id":"419","span":{"begin":1140,"end":1148},"obj":"Species"},{"id":"420","span":{"begin":1265,"end":1273},"obj":"Species"},{"id":"421","span":{"begin":1306,"end":1317},"obj":"Species"},{"id":"422","span":{"begin":1374,"end":1382},"obj":"Species"},{"id":"423","span":{"begin":1177,"end":1180},"obj":"Species"},{"id":"424","span":{"begin":1403,"end":1408},"obj":"Chemical"},{"id":"425","span":{"begin":1235,"end":1244},"obj":"Disease"},{"id":"438","span":{"begin":348,"end":356},"obj":"Species"},{"id":"439","span":{"begin":500,"end":508},"obj":"Species"},{"id":"440","span":{"begin":799,"end":807},"obj":"Species"},{"id":"441","span":{"begin":841,"end":849},"obj":"Species"},{"id":"442","span":{"begin":300,"end":305},"obj":"Chemical"},{"id":"443","span":{"begin":739,"end":744},"obj":"Chemical"},{"id":"444","span":{"begin":194,"end":203},"obj":"Disease"},{"id":"445","span":{"begin":429,"end":437},"obj":"Disease"},{"id":"446","span":{"begin":587,"end":596},"obj":"Disease"},{"id":"447","span":{"begin":694,"end":708},"obj":"Disease"},{"id":"448","span":{"begin":726,"end":734},"obj":"Disease"},{"id":"449","span":{"begin":929,"end":938},"obj":"Disease"}],"attributes":[{"id":"A411","pred":"tao:has_database_id","subj":"411","obj":"Tax:11120"},{"id":"A419","pred":"tao:has_database_id","subj":"419","obj":"Tax:9031"},{"id":"A420","pred":"tao:has_database_id","subj":"420","obj":"Tax:9031"},{"id":"A421","pred":"tao:has_database_id","subj":"421","obj":"Tax:35794"},{"id":"A422","pred":"tao:has_database_id","subj":"422","obj":"Tax:9031"},{"id":"A423","pred":"tao:has_database_id","subj":"423","obj":"Tax:11120"},{"id":"A425","pred":"tao:has_database_id","subj":"425","obj":"MESH:D003643"},{"id":"A438","pred":"tao:has_database_id","subj":"438","obj":"Tax:9031"},{"id":"A439","pred":"tao:has_database_id","subj":"439","obj":"Tax:9031"},{"id":"A440","pred":"tao:has_database_id","subj":"440","obj":"Tax:9031"},{"id":"A441","pred":"tao:has_database_id","subj":"441","obj":"Tax:9031"},{"id":"A443","pred":"tao:has_database_id","subj":"443","obj":"MESH:D014527"},{"id":"A444","pred":"tao:has_database_id","subj":"444","obj":"MESH:D003643"},{"id":"A445","pred":"tao:has_database_id","subj":"445","obj":"MESH:D003371"},{"id":"A446","pred":"tao:has_database_id","subj":"446","obj":"MESH:D003643"},{"id":"A447","pred":"tao:has_database_id","subj":"447","obj":"MESH:D007674"},{"id":"A448","pred":"tao:has_database_id","subj":"448","obj":"MESH:D004487"},{"id":"A449","pred":"tao:has_database_id","subj":"449","obj":"MESH:D003643"},{"subj":"411","pred":"source","obj":"LitCovid-PubTator"},{"subj":"419","pred":"source","obj":"LitCovid-PubTator"},{"subj":"420","pred":"source","obj":"LitCovid-PubTator"},{"subj":"421","pred":"source","obj":"LitCovid-PubTator"},{"subj":"422","pred":"source","obj":"LitCovid-PubTator"},{"subj":"423","pred":"source","obj":"LitCovid-PubTator"},{"subj":"424","pred":"source","obj":"LitCovid-PubTator"},{"subj":"425","pred":"source","obj":"LitCovid-PubTator"},{"subj":"438","pred":"source","obj":"LitCovid-PubTator"},{"subj":"439","pred":"source","obj":"LitCovid-PubTator"},{"subj":"440","pred":"source","obj":"LitCovid-PubTator"},{"subj":"441","pred":"source","obj":"LitCovid-PubTator"},{"subj":"442","pred":"source","obj":"LitCovid-PubTator"},{"subj":"443","pred":"source","obj":"LitCovid-PubTator"},{"subj":"444","pred":"source","obj":"LitCovid-PubTator"},{"subj":"445","pred":"source","obj":"LitCovid-PubTator"},{"subj":"446","pred":"source","obj":"LitCovid-PubTator"},{"subj":"447","pred":"source","obj":"LitCovid-PubTator"},{"subj":"448","pred":"source","obj":"LitCovid-PubTator"},{"subj":"449","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93ccec","default":true},{"id":"LitCovid-PD-UBERON","color":"#e6ec93"},{"id":"LitCovid-PD-MONDO","color":"#d793ec"},{"id":"LitCovid-PD-CLO","color":"#93ecbd"},{"id":"LitCovid-PD-CHEBI","color":"#eca393"},{"id":"LitCovid-sentences","color":"#939cec"},{"id":"LitCovid-PD-HP","color":"#b6ec93"},{"id":"LitCovid-PubTator","color":"#ec93d0"}]}]}}