PMC:7105881 / 60072-61563
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1767 | 115-123 | Species | denotes | mers-cov | Tax:1335626 |
1769 | 221-229 | Disease | denotes | covid-19 | MESH:C000657245 |
1771 | 344-348 | Species | denotes | ncov | Tax:2697049 |
1773 | 401-404 | Gene | denotes | ct2 | Gene:922 |
1775 | 452-455 | Gene | denotes | ct2 | Gene:922 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T334 | 704-712 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T335 | 777-785 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T336 | 933-940 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T337 | 1002-1009 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T338 | 1121-1129 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T285 | 680-688 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T286 | 789-797 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T287 | 799-805 | Disease | denotes | PDB: 5 | http://purl.obolibrary.org/obo/MONDO_0009394 |
T288 | 828-834 | Disease | denotes | PDB: 5 | http://purl.obolibrary.org/obo/MONDO_0009394 |
T289 | 1152-1160 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T290 | 1193-1201 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T679 | 124-126 | http://purl.obolibrary.org/obo/CLO_0037161 | denotes | en |
T680 | 662-664 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
T681 | 811-812 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T682 | 945-952 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
T683 | 1212-1213 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T684 | 1298-1316 | http://purl.obolibrary.org/obo/GO_0043235 | denotes | receptor complexes |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T79366 | 124-126 | Chemical | denotes | en | http://purl.obolibrary.org/obo/CHEBI_30347 |
T88377 | 704-712 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T67552 | 777-785 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T11071 | 933-940 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T81908 | 1002-1009 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T18364 | 1121-1129 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T2754 | 1352-1363 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T325 | 0-8 | Sentence | denotes | Funding. |
T326 | 9-79 | Sentence | denotes | This work was supported by the NIH grants R01AI137472 and R01AI139092. |
T327 | 80-127 | Sentence | denotes | 1 https://www.who.int/emergencies/mers-cov/en/ |
T328 | 128-250 | Sentence | denotes | 2 https://www.who.int/docs/default-source/coronaviruse/situation-reports/20200219-sitrep-30-covid-19.pdf?sfvrsn=6e50645_2 |
T329 | 251-370 | Sentence | denotes | 3 https://www.who.int/docs/default-source/coronaviruse/situation-reports/20200204-sitrep-15-ncov.pdf?sfvrsn=88fe8ad6_2 |
T330 | 371-421 | Sentence | denotes | 4 https://clinicaltrials.gov/ct2/show/NCT03615911 |
T331 | 422-472 | Sentence | denotes | 5 https://clinicaltrials.gov/ct2/show/NCT03399578 |
T332 | 474-496 | Sentence | denotes | Supplementary Material |
T333 | 497-654 | Sentence | denotes | The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fmicb.2020.00298/full#supplementary-material |
T334 | 655-765 | Sentence | denotes | FIGURE S1 Structures of SARS-CoV and MERS-CoV S proteins, RBDs, and their complexes with respective receptor. |
T335 | 766-803 | Sentence | denotes | Trimeric S proteins of SARS-CoV (PDB: |
T336 | 804-832 | Sentence | denotes | 5×5b) (A) and MERS-CoV (PDB: |
T337 | 833-884 | Sentence | denotes | 5×5f) (C) are colored differently for each monomer. |
T338 | 885-982 | Sentence | denotes | Two conformations of the RBD in each trimeric S protein are labeled as standing and lying states. |
T339 | 983-1053 | Sentence | denotes | The RBDs of each S protein are shown as light blue on the right panel. |
T340 | 1054-1183 | Sentence | denotes | ACE2 and DPP4 receptors are respectively modeled to the trimeric S proteins by match-alignment of SARS-CoV RBD-ACE2 complex (PDB: |
T341 | 1184-1249 | Sentence | denotes | 2AJF) to SARS-CoV S trimer (B) or MERS-CoV RBD-DPP4 complex (PDB: |
T342 | 1250-1281 | Sentence | denotes | 4kr0) to MERS-CoV S trimer (D). |
T343 | 1282-1345 | Sentence | denotes | Each of the RBD-receptor complexes is shown on the right panel. |
T344 | 1346-1454 | Sentence | denotes | ACE2, angiotensin-converting enzyme 2; DPP4, dipeptidyl peptidase 4; RBD, receptor-binding domain; S, spike. |
T345 | 1455-1491 | Sentence | denotes | Click here for additional data file. |