PMC:7105881 / 60072-61563 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7105881","sourcedb":"PMC","sourceid":"7105881","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7105881","text":"Funding. This work was supported by the NIH grants R01AI137472 and R01AI139092.\n1 https://www.who.int/emergencies/mers-cov/en/\n2 https://www.who.int/docs/default-source/coronaviruse/situation-reports/20200219-sitrep-30-covid-19.pdf?sfvrsn=6e50645_2\n3 https://www.who.int/docs/default-source/coronaviruse/situation-reports/20200204-sitrep-15-ncov.pdf?sfvrsn=88fe8ad6_2\n4 https://clinicaltrials.gov/ct2/show/NCT03615911\n5 https://clinicaltrials.gov/ct2/show/NCT03399578\n\nSupplementary Material\nThe Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fmicb.2020.00298/full#supplementary-material\nFIGURE S1 Structures of SARS-CoV and MERS-CoV S proteins, RBDs, and their complexes with respective receptor. Trimeric S proteins of SARS-CoV (PDB: 5×5b) (A) and MERS-CoV (PDB: 5×5f) (C) are colored differently for each monomer. Two conformations of the RBD in each trimeric S protein are labeled as standing and lying states. The RBDs of each S protein are shown as light blue on the right panel. ACE2 and DPP4 receptors are respectively modeled to the trimeric S proteins by match-alignment of SARS-CoV RBD-ACE2 complex (PDB: 2AJF) to SARS-CoV S trimer (B) or MERS-CoV RBD-DPP4 complex (PDB: 4kr0) to MERS-CoV S trimer (D). Each of the RBD-receptor complexes is shown on the right panel. ACE2, angiotensin-converting enzyme 2; DPP4, dipeptidyl peptidase 4; RBD, receptor-binding domain; S, spike.\nClick here for additional data file.","divisions":[{"label":"footnote","span":{"begin":0,"end":79}},{"label":"p","span":{"begin":0,"end":79}},{"label":"footnote","span":{"begin":80,"end":127}},{"label":"label","span":{"begin":80,"end":81}},{"label":"p","span":{"begin":83,"end":127}},{"label":"footnote","span":{"begin":128,"end":250}},{"label":"label","span":{"begin":128,"end":129}},{"label":"p","span":{"begin":131,"end":250}},{"label":"footnote","span":{"begin":251,"end":370}},{"label":"label","span":{"begin":251,"end":252}},{"label":"p","span":{"begin":254,"end":370}},{"label":"footnote","span":{"begin":371,"end":421}},{"label":"label","span":{"begin":371,"end":372}},{"label":"p","span":{"begin":374,"end":421}},{"label":"footnote","span":{"begin":422,"end":472}},{"label":"label","span":{"begin":422,"end":423}},{"label":"p","span":{"begin":425,"end":472}},{"label":"title","span":{"begin":474,"end":496}},{"label":"p","span":{"begin":497,"end":654}},{"label":"label","span":{"begin":655,"end":664}},{"label":"caption","span":{"begin":666,"end":1454}},{"label":"p","span":{"begin":666,"end":1454}}],"tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"1767","span":{"begin":115,"end":123},"obj":"Species"},{"id":"1769","span":{"begin":221,"end":229},"obj":"Disease"},{"id":"1771","span":{"begin":344,"end":348},"obj":"Species"},{"id":"1773","span":{"begin":401,"end":404},"obj":"Gene"},{"id":"1775","span":{"begin":452,"end":455},"obj":"Gene"}],"attributes":[{"id":"A1767","pred":"tao:has_database_id","subj":"1767","obj":"Tax:1335626"},{"id":"A1769","pred":"tao:has_database_id","subj":"1769","obj":"MESH:C000657245"},{"id":"A1771","pred":"tao:has_database_id","subj":"1771","obj":"Tax:2697049"},{"id":"A1773","pred":"tao:has_database_id","subj":"1773","obj":"Gene:922"},{"id":"A1775","pred":"tao:has_database_id","subj":"1775","obj":"Gene:922"},{"subj":"1767","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1769","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1771","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1773","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1775","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T334","span":{"begin":704,"end":712},"obj":"Body_part"},{"id":"T335","span":{"begin":777,"end":785},"obj":"Body_part"},{"id":"T336","span":{"begin":933,"end":940},"obj":"Body_part"},{"id":"T337","span":{"begin":1002,"end":1009},"obj":"Body_part"},{"id":"T338","span":{"begin":1121,"end":1129},"obj":"Body_part"}],"attributes":[{"id":"A334","pred":"fma_id","subj":"T334","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A335","pred":"fma_id","subj":"T335","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A336","pred":"fma_id","subj":"T336","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A337","pred":"fma_id","subj":"T337","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A338","pred":"fma_id","subj":"T338","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T334","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T335","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T336","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T337","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T338","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T285","span":{"begin":680,"end":688},"obj":"Disease"},{"id":"T286","span":{"begin":789,"end":797},"obj":"Disease"},{"id":"T287","span":{"begin":799,"end":805},"obj":"Disease"},{"id":"T288","span":{"begin":828,"end":834},"obj":"Disease"},{"id":"T289","span":{"begin":1152,"end":1160},"obj":"Disease"},{"id":"T290","span":{"begin":1193,"end":1201},"obj":"Disease"}],"attributes":[{"id":"A285","pred":"mondo_id","subj":"T285","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A286","pred":"mondo_id","subj":"T286","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A287","pred":"mondo_id","subj":"T287","obj":"http://purl.obolibrary.org/obo/MONDO_0009394"},{"id":"A288","pred":"mondo_id","subj":"T288","obj":"http://purl.obolibrary.org/obo/MONDO_0009394"},{"id":"A289","pred":"mondo_id","subj":"T289","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A290","pred":"mondo_id","subj":"T290","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T285","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T286","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T287","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T288","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T289","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T290","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T679","span":{"begin":124,"end":126},"obj":"http://purl.obolibrary.org/obo/CLO_0037161"},{"id":"T680","span":{"begin":662,"end":664},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T681","span":{"begin":811,"end":812},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T682","span":{"begin":945,"end":952},"obj":"http://purl.obolibrary.org/obo/CLO_0007225"},{"id":"T683","span":{"begin":1212,"end":1213},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T684","span":{"begin":1298,"end":1316},"obj":"http://purl.obolibrary.org/obo/GO_0043235"}],"attributes":[{"subj":"T679","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T680","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T681","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T682","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T683","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T684","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T79366","span":{"begin":124,"end":126},"obj":"Chemical"},{"id":"T88377","span":{"begin":704,"end":712},"obj":"Chemical"},{"id":"T67552","span":{"begin":777,"end":785},"obj":"Chemical"},{"id":"T11071","span":{"begin":933,"end":940},"obj":"Chemical"},{"id":"T81908","span":{"begin":1002,"end":1009},"obj":"Chemical"},{"id":"T18364","span":{"begin":1121,"end":1129},"obj":"Chemical"},{"id":"T2754","span":{"begin":1352,"end":1363},"obj":"Chemical"}],"attributes":[{"id":"A22649","pred":"chebi_id","subj":"T79366","obj":"http://purl.obolibrary.org/obo/CHEBI_30347"},{"id":"A78194","pred":"chebi_id","subj":"T88377","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A47066","pred":"chebi_id","subj":"T67552","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A55443","pred":"chebi_id","subj":"T11071","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A45232","pred":"chebi_id","subj":"T81908","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A74662","pred":"chebi_id","subj":"T18364","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A86544","pred":"chebi_id","subj":"T2754","obj":"http://purl.obolibrary.org/obo/CHEBI_48433"},{"subj":"T79366","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T88377","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T67552","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T11071","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T81908","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T18364","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T2754","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T325","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T326","span":{"begin":9,"end":79},"obj":"Sentence"},{"id":"T327","span":{"begin":80,"end":127},"obj":"Sentence"},{"id":"T328","span":{"begin":128,"end":250},"obj":"Sentence"},{"id":"T329","span":{"begin":251,"end":370},"obj":"Sentence"},{"id":"T330","span":{"begin":371,"end":421},"obj":"Sentence"},{"id":"T331","span":{"begin":422,"end":472},"obj":"Sentence"},{"id":"T332","span":{"begin":474,"end":496},"obj":"Sentence"},{"id":"T333","span":{"begin":497,"end":654},"obj":"Sentence"},{"id":"T334","span":{"begin":655,"end":765},"obj":"Sentence"},{"id":"T335","span":{"begin":766,"end":803},"obj":"Sentence"},{"id":"T336","span":{"begin":804,"end":832},"obj":"Sentence"},{"id":"T337","span":{"begin":833,"end":884},"obj":"Sentence"},{"id":"T338","span":{"begin":885,"end":982},"obj":"Sentence"},{"id":"T339","span":{"begin":983,"end":1053},"obj":"Sentence"},{"id":"T340","span":{"begin":1054,"end":1183},"obj":"Sentence"},{"id":"T341","span":{"begin":1184,"end":1249},"obj":"Sentence"},{"id":"T342","span":{"begin":1250,"end":1281},"obj":"Sentence"},{"id":"T343","span":{"begin":1282,"end":1345},"obj":"Sentence"},{"id":"T344","span":{"begin":1346,"end":1454},"obj":"Sentence"},{"id":"T345","span":{"begin":1455,"end":1491},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T325","pred":"source","obj":"LitCovid-sentences"},{"subj":"T326","pred":"source","obj":"LitCovid-sentences"},{"subj":"T327","pred":"source","obj":"LitCovid-sentences"},{"subj":"T328","pred":"source","obj":"LitCovid-sentences"},{"subj":"T329","pred":"source","obj":"LitCovid-sentences"},{"subj":"T330","pred":"source","obj":"LitCovid-sentences"},{"subj":"T331","pred":"source","obj":"LitCovid-sentences"},{"subj":"T332","pred":"source","obj":"LitCovid-sentences"},{"subj":"T333","pred":"source","obj":"LitCovid-sentences"},{"subj":"T334","pred":"source","obj":"LitCovid-sentences"},{"subj":"T335","pred":"source","obj":"LitCovid-sentences"},{"subj":"T336","pred":"source","obj":"LitCovid-sentences"},{"subj":"T337","pred":"source","obj":"LitCovid-sentences"},{"subj":"T338","pred":"source","obj":"LitCovid-sentences"},{"subj":"T339","pred":"source","obj":"LitCovid-sentences"},{"subj":"T340","pred":"source","obj":"LitCovid-sentences"},{"subj":"T341","pred":"source","obj":"LitCovid-sentences"},{"subj":"T342","pred":"source","obj":"LitCovid-sentences"},{"subj":"T343","pred":"source","obj":"LitCovid-sentences"},{"subj":"T344","pred":"source","obj":"LitCovid-sentences"},{"subj":"T345","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#93ecd9","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#ecbf93"},{"id":"LitCovid-PD-MONDO","color":"#a593ec"},{"id":"LitCovid-PD-CLO","color":"#9aec93"},{"id":"LitCovid-PD-CHEBI","color":"#ec93b4"},{"id":"LitCovid-sentences","color":"#93ceec"}]}]}}