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PMC:7103735 / 35554-36386 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T123 500-504 Body_part denotes back http://purl.org/sig/ont/fma/fma25056

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T366 200-208 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T367 200-204 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T368 341-345 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T369 535-543 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T370 535-539 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T409 424-431 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T410 607-613 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T303 0-50 Sentence denotes CoVs are believed to have existed for >6000 years.
T304 51-163 Sentence denotes Molecular clock analysis enables us to deduce the time of emergence or cross-species transmission of some HCoVs.
T305 164-270 Sentence denotes Surprisingly, the highly pathogenic SARS-CoV and MERS-CoV are thought to emerge in the last 30 years [56].
T306 271-432 Sentence denotes Although NL63 and HKU1 of low pathogenicity were isolated in the post-SARS era, their time of emergence was earlier than the other two highly pathogenic viruses.
T307 433-518 Sentence denotes Whereas NL63 emerged >500 years ago [57], the origin of HKU1 dated back to the 1950s.
T308 519-697 Sentence denotes In other words, SARS-CoV and MERS-CoV represent newcomers that are striving to adapt to humans, whereas other community-acquired HCoVs including NL63 and HKU1 are better adapted.
T309 698-832 Sentence denotes The results of molecular dating of HCoVs suggest that attenuation might be favoured during evolution when host adaptation takes place.

2_test

Id Subject Object Predicate Lexical cue
32172672-26269185-27782258 266-268 26269185 denotes 56
32172672-22993147-27782259 470-472 22993147 denotes 57

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1049 0-4 Species denotes CoVs Tax:11118
1050 200-208 Species denotes SARS-CoV Tax:694009
1051 213-221 Species denotes MERS-CoV Tax:1335626
1052 535-543 Species denotes SARS-CoV Tax:694009
1053 548-556 Species denotes MERS-CoV Tax:1335626
1054 607-613 Species denotes humans Tax:9606
1055 280-284 Species denotes NL63 Tax:277944
1056 441-445 Species denotes NL63 Tax:277944
1057 664-668 Species denotes NL63 Tax:277944

MyTest

Id Subject Object Predicate Lexical cue
32172672-26269185-27782258 266-268 26269185 denotes 56
32172672-22993147-27782259 470-472 22993147 denotes 57