PMC:7100515 / 29058-29763
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T243 | 513-520 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T244 | 610-614 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T281 | 151-159 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T282 | 194-203 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T283 | 524-532 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T284 | 592-600 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T646 | 46-52 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T647 | 68-75 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
| T648 | 170-175 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T649 | 255-258 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T650 | 387-392 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T651 | 411-412 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T652 | 486-487 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T653 | 544-549 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T654 | 610-614 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T655 | 653-658 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T218 | 513-520 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T219 | 693-697 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T54 | 659-671 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T3 | 194-203 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T217 | 0-132 | Sentence | denotes | About 70% of the emerging pathogens infecting humans originate from animals, and CoVs are among the forefronts of these pathogens45. |
| T218 | 133-332 | Sentence | denotes | The newly emerged SARS-CoV-2 infects human and causes severe pneumonia, and as of 10 February, 2020, the current outbreak has spread to 25 countries with over 40,000 confirmed cases and 900 deaths46. |
| T219 | 333-376 | Sentence | denotes | However, little is known about its biology. |
| T220 | 377-573 | Sentence | denotes | Since the virus is categorized as a biosafety level 3 (BSL3) agent, according to WHO guideline, we developed a pseudotype system with S protein of SARS-CoV-2 to study virus entry in BSL2 settings. |
| T221 | 574-705 | Sentence | denotes | Understanding how SARS-CoV-2 enters cell will provide valuable information for virus pathogenesis, vaccine design, and drug target. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32221306-17445320-73894038 | 129-131 | 17445320 | denotes | 45 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1231 | 511-512 | Gene | denotes | S | Gene:43740568 |
| 1232 | 46-52 | Species | denotes | humans | Tax:9606 |
| 1233 | 81-85 | Species | denotes | CoVs | Tax:11118 |
| 1234 | 151-161 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1235 | 170-175 | Species | denotes | human | Tax:9606 |
| 1236 | 524-534 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1237 | 592-602 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1238 | 194-203 | Disease | denotes | pneumonia | MESH:D011014 |
| 1239 | 323-329 | Disease | denotes | deaths | MESH:D003643 |