PMC:7079563 / 20188-21435
Annnotations
{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7079563","sourcedb":"PMC","sourceid":"7079563","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7079563","text":"3.3 Origin of 2019-nCoV\nThe epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36].","divisions":[{"label":"label","span":{"begin":0,"end":3}},{"label":"title","span":{"begin":5,"end":24}}],"tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"644","span":{"begin":213,"end":234},"obj":"Species"},{"id":"645","span":{"begin":280,"end":289},"obj":"Species"},{"id":"646","span":{"begin":504,"end":509},"obj":"Species"},{"id":"647","span":{"begin":560,"end":565},"obj":"Species"},{"id":"648","span":{"begin":591,"end":599},"obj":"Species"},{"id":"649","span":{"begin":604,"end":612},"obj":"Species"},{"id":"650","span":{"begin":677,"end":683},"obj":"Species"},{"id":"651","span":{"begin":717,"end":723},"obj":"Species"},{"id":"652","span":{"begin":750,"end":759},"obj":"Species"},{"id":"653","span":{"begin":816,"end":822},"obj":"Species"},{"id":"654","span":{"begin":905,"end":914},"obj":"Species"},{"id":"655","span":{"begin":1073,"end":1079},"obj":"Species"},{"id":"656","span":{"begin":1146,"end":1155},"obj":"Species"},{"id":"657","span":{"begin":1169,"end":1172},"obj":"Species"},{"id":"658","span":{"begin":1235,"end":1241},"obj":"Species"},{"id":"659","span":{"begin":77,"end":96},"obj":"Disease"},{"id":"660","span":{"begin":1054,"end":1072},"obj":"Disease"},{"id":"661","span":{"begin":1226,"end":1234},"obj":"Disease"}],"attributes":[{"id":"A644","pred":"tao:has_database_id","subj":"644","obj":"Tax:33858"},{"id":"A645","pred":"tao:has_database_id","subj":"645","obj":"Tax:2697049"},{"id":"A646","pred":"tao:has_database_id","subj":"646","obj":"Tax:9606"},{"id":"A647","pred":"tao:has_database_id","subj":"647","obj":"Tax:9606"},{"id":"A648","pred":"tao:has_database_id","subj":"648","obj":"Tax:694009"},{"id":"A649","pred":"tao:has_database_id","subj":"649","obj":"Tax:1335626"},{"id":"A650","pred":"tao:has_database_id","subj":"650","obj":"Tax:9606"},{"id":"A651","pred":"tao:has_database_id","subj":"651","obj":"Tax:9837"},{"id":"A652","pred":"tao:has_database_id","subj":"652","obj":"Tax:2697049"},{"id":"A653","pred":"tao:has_database_id","subj":"653","obj":"Tax:9606"},{"id":"A654","pred":"tao:has_database_id","subj":"654","obj":"Tax:2697049"},{"id":"A655","pred":"tao:has_database_id","subj":"655","obj":"Tax:9606"},{"id":"A656","pred":"tao:has_database_id","subj":"656","obj":"Tax:2697049"},{"id":"A657","pred":"tao:has_database_id","subj":"657","obj":"Tax:11118"},{"id":"A658","pred":"tao:has_database_id","subj":"658","obj":"Tax:9606"},{"id":"A659","pred":"tao:has_database_id","subj":"659","obj":"MESH:C000657245"},{"id":"A660","pred":"tao:has_database_id","subj":"660","obj":"MESH:C000657245"},{"id":"A661","pred":"tao:has_database_id","subj":"661","obj":"MESH:D007239"},{"subj":"644","pred":"source","obj":"LitCovid-PubTator"},{"subj":"645","pred":"source","obj":"LitCovid-PubTator"},{"subj":"646","pred":"source","obj":"LitCovid-PubTator"},{"subj":"647","pred":"source","obj":"LitCovid-PubTator"},{"subj":"648","pred":"source","obj":"LitCovid-PubTator"},{"subj":"649","pred":"source","obj":"LitCovid-PubTator"},{"subj":"650","pred":"source","obj":"LitCovid-PubTator"},{"subj":"651","pred":"source","obj":"LitCovid-PubTator"},{"subj":"652","pred":"source","obj":"LitCovid-PubTator"},{"subj":"653","pred":"source","obj":"LitCovid-PubTator"},{"subj":"654","pred":"source","obj":"LitCovid-PubTator"},{"subj":"655","pred":"source","obj":"LitCovid-PubTator"},{"subj":"656","pred":"source","obj":"LitCovid-PubTator"},{"subj":"657","pred":"source","obj":"LitCovid-PubTator"},{"subj":"658","pred":"source","obj":"LitCovid-PubTator"},{"subj":"659","pred":"source","obj":"LitCovid-PubTator"},{"subj":"660","pred":"source","obj":"LitCovid-PubTator"},{"subj":"661","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T72","span":{"begin":87,"end":96},"obj":"Disease"},{"id":"T73","span":{"begin":591,"end":599},"obj":"Disease"},{"id":"T74","span":{"begin":1054,"end":1072},"obj":"Disease"}],"attributes":[{"id":"A72","pred":"mondo_id","subj":"T72","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A73","pred":"mondo_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A74","pred":"mondo_id","subj":"T74","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T72","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T73","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T74","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T137","span":{"begin":324,"end":325},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T138","span":{"begin":342,"end":349},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T139","span":{"begin":435,"end":439},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T140","span":{"begin":455,"end":459},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T141","span":{"begin":504,"end":509},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T142","span":{"begin":542,"end":547},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T143","span":{"begin":553,"end":556},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T144","span":{"begin":560,"end":568},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T145","span":{"begin":629,"end":633},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T146","span":{"begin":677,"end":683},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T147","span":{"begin":717,"end":723},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9837"},{"id":"T148","span":{"begin":784,"end":795},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T149","span":{"begin":816,"end":822},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T150","span":{"begin":882,"end":884},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T151","span":{"begin":888,"end":890},"obj":"http://purl.obolibrary.org/obo/CLO_0001000"},{"id":"T152","span":{"begin":915,"end":918},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T153","span":{"begin":1073,"end":1079},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T154","span":{"begin":1084,"end":1087},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T155","span":{"begin":1165,"end":1168},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T156","span":{"begin":1235,"end":1241},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T157","span":{"begin":1243,"end":1245},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"}],"attributes":[{"subj":"T137","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T138","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T139","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T140","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T141","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T142","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T143","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T144","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T145","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T146","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T147","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T148","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T150","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T151","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T152","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T153","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T154","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T155","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T156","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T157","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T155","span":{"begin":0,"end":24},"obj":"Sentence"},{"id":"T156","span":{"begin":25,"end":185},"obj":"Sentence"},{"id":"T157","span":{"begin":186,"end":448},"obj":"Sentence"},{"id":"T158","span":{"begin":449,"end":582},"obj":"Sentence"},{"id":"T159","span":{"begin":583,"end":738},"obj":"Sentence"},{"id":"T160","span":{"begin":739,"end":893},"obj":"Sentence"},{"id":"T161","span":{"begin":894,"end":1080},"obj":"Sentence"},{"id":"T162","span":{"begin":1081,"end":1247},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T155","pred":"source","obj":"LitCovid-sentences"},{"subj":"T156","pred":"source","obj":"LitCovid-sentences"},{"subj":"T157","pred":"source","obj":"LitCovid-sentences"},{"subj":"T158","pred":"source","obj":"LitCovid-sentences"},{"subj":"T159","pred":"source","obj":"LitCovid-sentences"},{"subj":"T160","pred":"source","obj":"LitCovid-sentences"},{"subj":"T161","pred":"source","obj":"LitCovid-sentences"},{"subj":"T162","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T26","span":{"begin":87,"end":96},"obj":"Phenotype"}],"attributes":[{"id":"A26","pred":"hp_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"2_test","denotations":[{"id":"32087334-31978945-69695010","span":{"begin":176,"end":177},"obj":"31978945"},{"id":"32087334-30531947-69695011","span":{"begin":579,"end":580},"obj":"30531947"},{"id":"32087334-23075143-69695012","span":{"begin":864,"end":866},"obj":"23075143"},{"id":"32087334-12958366-69695013","span":{"begin":870,"end":872},"obj":"12958366"},{"id":"32087334-24172901-69695014","span":{"begin":876,"end":878},"obj":"24172901"},{"id":"32087334-24896817-69695015","span":{"begin":882,"end":884},"obj":"24896817"},{"id":"32087334-24675934-69695016","span":{"begin":888,"end":890},"obj":"24675934"}],"attributes":[{"subj":"32087334-31978945-69695010","pred":"source","obj":"2_test"},{"subj":"32087334-30531947-69695011","pred":"source","obj":"2_test"},{"subj":"32087334-23075143-69695012","pred":"source","obj":"2_test"},{"subj":"32087334-12958366-69695013","pred":"source","obj":"2_test"},{"subj":"32087334-24172901-69695014","pred":"source","obj":"2_test"},{"subj":"32087334-24896817-69695015","pred":"source","obj":"2_test"},{"subj":"32087334-24675934-69695016","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec93e7","default":true},{"id":"LitCovid-PD-MONDO","color":"#93ecd7"},{"id":"LitCovid-PD-CLO","color":"#ecbd93"},{"id":"LitCovid-sentences","color":"#a393ec"},{"id":"LitCovid-PD-HP","color":"#9dec93"},{"id":"2_test","color":"#ec93b7"}]}]}}