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PMC:7079563 / 20188-21435 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
644 213-234 Species denotes environmental samples Tax:33858
645 280-289 Species denotes 2019-nCoV Tax:2697049
646 504-509 Species denotes human Tax:9606
647 560-565 Species denotes human Tax:9606
648 591-599 Species denotes SARS-CoV Tax:694009
649 604-612 Species denotes MERS-CoV Tax:1335626
650 677-683 Species denotes humans Tax:9606
651 717-723 Species denotes camels Tax:9837
652 750-759 Species denotes 2019-nCoV Tax:2697049
653 816-822 Species denotes humans Tax:9606
654 905-914 Species denotes 2019-nCoV Tax:2697049
655 1073-1079 Species denotes humans Tax:9606
656 1146-1155 Species denotes 2019-nCoV Tax:2697049
657 1169-1172 Species denotes CoV Tax:11118
658 1235-1241 Species denotes humans Tax:9606
659 77-96 Disease denotes 2019-nCoV pneumonia MESH:C000657245
660 1054-1072 Disease denotes 2019-nCoV infected MESH:C000657245
661 1226-1234 Disease denotes infected MESH:D007239

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T72 87-96 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T73 591-599 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T74 1054-1072 Disease denotes 2019-nCoV infected http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T137 324-325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T138 342-349 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T139 435-439 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T140 455-459 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T141 504-509 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T142 542-547 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T143 553-556 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T144 560-568 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human is
T145 629-633 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T146 677-683 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T147 717-723 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camels
T148 784-795 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat but was
T149 816-822 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T150 882-884 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T151 888-890 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T152 915-918 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T153 1073-1079 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T154 1084-1087 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T155 1165-1168 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T156 1235-1241 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T157 1243-1245 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T155 0-24 Sentence denotes 3.3 Origin of 2019-nCoV
T156 25-185 Sentence denotes The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20].
T157 186-448 Sentence denotes In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30].
T158 449-582 Sentence denotes Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1].
T159 583-738 Sentence denotes Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively.
T160 739-893 Sentence denotes Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]].
T161 894-1080 Sentence denotes Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans.
T162 1081-1247 Sentence denotes It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T26 87-96 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

2_test

Id Subject Object Predicate Lexical cue
32087334-31978945-69695010 176-177 31978945 denotes 2
32087334-30531947-69695011 579-580 30531947 denotes 1
32087334-23075143-69695012 864-866 23075143 denotes 31
32087334-12958366-69695013 870-872 12958366 denotes 32
32087334-24172901-69695014 876-878 24172901 denotes 33
32087334-24896817-69695015 882-884 24896817 denotes 34
32087334-24675934-69695016 888-890 24675934 denotes 35