PMC:7049657 / 874-2224 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"43","span":{"begin":1186,"end":1189},"obj":"Gene"},{"id":"44","span":{"begin":15,"end":26},"obj":"Species"},{"id":"45","span":{"begin":35,"end":48},"obj":"Species"},{"id":"46","span":{"begin":94,"end":107},"obj":"Species"},{"id":"47","span":{"begin":215,"end":226},"obj":"Species"},{"id":"48","span":{"begin":242,"end":253},"obj":"Species"},{"id":"49","span":{"begin":263,"end":290},"obj":"Species"},{"id":"50","span":{"begin":300,"end":308},"obj":"Species"},{"id":"51","span":{"begin":433,"end":441},"obj":"Species"},{"id":"52","span":{"begin":594,"end":604},"obj":"Species"},{"id":"53","span":{"begin":654,"end":662},"obj":"Species"},{"id":"54","span":{"begin":1190,"end":1209},"obj":"Species"},{"id":"55","span":{"begin":292,"end":295},"obj":"Species"},{"id":"56","span":{"begin":361,"end":364},"obj":"Species"},{"id":"57","span":{"begin":443,"end":446},"obj":"Species"},{"id":"58","span":{"begin":763,"end":766},"obj":"Species"},{"id":"59","span":{"begin":938,"end":941},"obj":"Species"},{"id":"60","span":{"begin":1042,"end":1045},"obj":"Species"},{"id":"61","span":{"begin":1126,"end":1129},"obj":"Species"},{"id":"62","span":{"begin":465,"end":498},"obj":"Disease"},{"id":"63","span":{"begin":568,"end":577},"obj":"Disease"},{"id":"64","span":{"begin":1264,"end":1273},"obj":"Disease"},{"id":"65","span":{"begin":1278,"end":1287},"obj":"Disease"}],"attributes":[{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"Gene:570"},{"id":"A44","pred":"tao:has_database_id","subj":"44","obj":"Tax:11118"},{"id":"A45","pred":"tao:has_database_id","subj":"45","obj":"Tax:11118"},{"id":"A46","pred":"tao:has_database_id","subj":"46","obj":"Tax:11118"},{"id":"A47","pred":"tao:has_database_id","subj":"47","obj":"Tax:11118"},{"id":"A48","pred":"tao:has_database_id","subj":"48","obj":"Tax:11118"},{"id":"A49","pred":"tao:has_database_id","subj":"49","obj":"Tax:11120"},{"id":"A50","pred":"tao:has_database_id","subj":"50","obj":"Tax:9031"},{"id":"A51","pred":"tao:has_database_id","subj":"51","obj":"Tax:9031"},{"id":"A52","pred":"tao:has_database_id","subj":"52","obj":"Tax:2697049"},{"id":"A53","pred":"tao:has_database_id","subj":"53","obj":"Tax:9606"},{"id":"A54","pred":"tao:has_database_id","subj":"54","obj":"Tax:28293"},{"id":"A55","pred":"tao:has_database_id","subj":"55","obj":"Tax:11120"},{"id":"A56","pred":"tao:has_database_id","subj":"56","obj":"Tax:11120"},{"id":"A57","pred":"tao:has_database_id","subj":"57","obj":"Tax:11120"},{"id":"A58","pred":"tao:has_database_id","subj":"58","obj":"Tax:11120"},{"id":"A59","pred":"tao:has_database_id","subj":"59","obj":"Tax:11120"},{"id":"A60","pred":"tao:has_database_id","subj":"60","obj":"Tax:11120"},{"id":"A61","pred":"tao:has_database_id","subj":"61","obj":"Tax:11120"},{"id":"A62","pred":"tao:has_database_id","subj":"62","obj":"MESH:D012141"},{"id":"A63","pred":"tao:has_database_id","subj":"63","obj":"MESH:D009393"},{"id":"A64","pred":"tao:has_database_id","subj":"64","obj":"MESH:D003967"},{"id":"A65","pred":"tao:has_database_id","subj":"65","obj":"MESH:D003643"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Members of the Coronavirus family (Coronaviridae) are quintessential One Health viruses. Many coronaviruses are serious animal health threats. Dr. Oskar Seifried, a veterinarian, provided the first description of a Coronavirus in 1931 [3]; a coronavirus known as Infectious Bronchitis virus (IBV) of Chickens. Today, based on the genetic analysis, we recognise IBV as a Gammacoronavirus which produces a highly contagious disease in chickens. IBV produces not only upper respiratory tract infection, but also affects the reproductive tract, and some strains can cause nephritis [4]. Curiously, SARS-COV-2 is also producing renal problems in severely ill patients. It is relevant from a One Health perspective to note that different serotypes and genetic types of IBV are present worldwide and that there seems to be little, if any cross-protection from one serotype to the next. Also, the veterinary community has noted that new types of IBV continue to arise as a result of recombination events in the viral genome and from mutation, making IBV challenging to identify and extremely difficult to control, even though several IBV vaccines exist [5]. Another serious Coronoavirus is the bat enteric coronavirus HKU2, identified in China, which causes severe piglet diarrhoea and mortality, and has led to serious impacts to the livestock industry [6]."}

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{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T1","span":{"begin":465,"end":488},"obj":"Body_part"},{"id":"T2","span":{"begin":471,"end":488},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0001557"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000065"}],"text":"Members of the Coronavirus family (Coronaviridae) are quintessential One Health viruses. Many coronaviruses are serious animal health threats. Dr. Oskar Seifried, a veterinarian, provided the first description of a Coronavirus in 1931 [3]; a coronavirus known as Infectious Bronchitis virus (IBV) of Chickens. Today, based on the genetic analysis, we recognise IBV as a Gammacoronavirus which produces a highly contagious disease in chickens. IBV produces not only upper respiratory tract infection, but also affects the reproductive tract, and some strains can cause nephritis [4]. Curiously, SARS-COV-2 is also producing renal problems in severely ill patients. It is relevant from a One Health perspective to note that different serotypes and genetic types of IBV are present worldwide and that there seems to be little, if any cross-protection from one serotype to the next. Also, the veterinary community has noted that new types of IBV continue to arise as a result of recombination events in the viral genome and from mutation, making IBV challenging to identify and extremely difficult to control, even though several IBV vaccines exist [5]. Another serious Coronoavirus is the bat enteric coronavirus HKU2, identified in China, which causes severe piglet diarrhoea and mortality, and has led to serious impacts to the livestock industry [6]."}

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{"project":"LitCovid-PD-HP","denotations":[{"id":"T2","span":{"begin":274,"end":284},"obj":"Phenotype"},{"id":"T3","span":{"begin":465,"end":498},"obj":"Phenotype"},{"id":"T4","span":{"begin":568,"end":577},"obj":"Phenotype"},{"id":"T5","span":{"begin":1264,"end":1273},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0012387"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0002788"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0000123"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0002014"}],"text":"Members of the Coronavirus family (Coronaviridae) are quintessential One Health viruses. Many coronaviruses are serious animal health threats. Dr. Oskar Seifried, a veterinarian, provided the first description of a Coronavirus in 1931 [3]; a coronavirus known as Infectious Bronchitis virus (IBV) of Chickens. Today, based on the genetic analysis, we recognise IBV as a Gammacoronavirus which produces a highly contagious disease in chickens. IBV produces not only upper respiratory tract infection, but also affects the reproductive tract, and some strains can cause nephritis [4]. Curiously, SARS-COV-2 is also producing renal problems in severely ill patients. It is relevant from a One Health perspective to note that different serotypes and genetic types of IBV are present worldwide and that there seems to be little, if any cross-protection from one serotype to the next. Also, the veterinary community has noted that new types of IBV continue to arise as a result of recombination events in the viral genome and from mutation, making IBV challenging to identify and extremely difficult to control, even though several IBV vaccines exist [5]. Another serious Coronoavirus is the bat enteric coronavirus HKU2, identified in China, which causes severe piglet diarrhoea and mortality, and has led to serious impacts to the livestock industry [6]."}

{"project":"LitCovid-sentences","denotations":[{"id":"T7","span":{"begin":0,"end":88},"obj":"Sentence"},{"id":"T8","span":{"begin":89,"end":142},"obj":"Sentence"},{"id":"T9","span":{"begin":143,"end":309},"obj":"Sentence"},{"id":"T10","span":{"begin":310,"end":442},"obj":"Sentence"},{"id":"T11","span":{"begin":443,"end":582},"obj":"Sentence"},{"id":"T12","span":{"begin":583,"end":663},"obj":"Sentence"},{"id":"T13","span":{"begin":664,"end":878},"obj":"Sentence"},{"id":"T14","span":{"begin":879,"end":1149},"obj":"Sentence"},{"id":"T15","span":{"begin":1150,"end":1350},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Members of the Coronavirus family (Coronaviridae) are quintessential One Health viruses. Many coronaviruses are serious animal health threats. Dr. Oskar Seifried, a veterinarian, provided the first description of a Coronavirus in 1931 [3]; a coronavirus known as Infectious Bronchitis virus (IBV) of Chickens. Today, based on the genetic analysis, we recognise IBV as a Gammacoronavirus which produces a highly contagious disease in chickens. IBV produces not only upper respiratory tract infection, but also affects the reproductive tract, and some strains can cause nephritis [4]. Curiously, SARS-COV-2 is also producing renal problems in severely ill patients. It is relevant from a One Health perspective to note that different serotypes and genetic types of IBV are present worldwide and that there seems to be little, if any cross-protection from one serotype to the next. Also, the veterinary community has noted that new types of IBV continue to arise as a result of recombination events in the viral genome and from mutation, making IBV challenging to identify and extremely difficult to control, even though several IBV vaccines exist [5]. Another serious Coronoavirus is the bat enteric coronavirus HKU2, identified in China, which causes severe piglet diarrhoea and mortality, and has led to serious impacts to the livestock industry [6]."}