PMC:7039956 / 16554-17032
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 409 | 368-371 | Gene | denotes | Kit | Gene:3815 |
| 410 | 109-117 | Chemical | denotes | chromium | MESH:D002857 |
| 411 | 232-248 | Chemical | denotes | oligonucleotides | MESH:D009841 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T306 | 7-11 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T307 | 12-15 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T308 | 66-70 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T309 | 159-164 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T310 | 166-171 | Body_part | denotes | Cells | http://purl.org/sig/ont/fma/fma68646 |
| T311 | 363-367 | Body_part | denotes | Cell | http://purl.org/sig/ont/fma/fma68646 |
| T312 | 373-375 | Body_part | denotes | v3 | http://purl.org/sig/ont/fma/fma13442 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T315 | 7-11 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T316 | 66-70 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T317 | 159-164 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T318 | 166-171 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cells |
| T319 | 298-299 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T320 | 363-367 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
| T321 | 373-375 | http://purl.obolibrary.org/obo/CLO_0050428 | denotes | v3 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T17 | 109-117 | Chemical | denotes | chromium | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T18 | 232-248 | Chemical | denotes | oligonucleotides | http://purl.obolibrary.org/obo/CHEBI_7754 |
| T19 | 347-355 | Chemical | denotes | Chromium | http://purl.obolibrary.org/obo/CHEBI_28073 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T104 | 0-46 | Sentence | denotes | Single cell RNA-sequencing library preparation |
| T105 | 47-165 | Sentence | denotes | To generate single-cell Gel Beads-in-Emulsion (GEMs), the 10× chromium platform was used to capture and barcode cells. |
| T106 | 166-403 | Sentence | denotes | Cells were partitioned into GEMs along with gel beads coated with oligonucleotides and cDNAs with both barcodes were amplified, and a library was constructed using the 10× Genomics Chromium Single Cell Kit (v3 chemistry) for each sample. |
| T107 | 404-478 | Sentence | denotes | The resulting libraries were sequenced on an Illumina NovaSeq 6000 System. |