PMC:7033706 / 2447-3065
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
46 | 58-63 | Gene | denotes | spike | Gene:43740568 |
47 | 548-549 | Gene | denotes | S | Gene:43740568 |
48 | 302-303 | Gene | denotes | S | Gene:43740568 |
49 | 115-116 | Gene | denotes | S | Gene:43740568 |
50 | 48-57 | Species | denotes | 2019-nCoV | Tax:2697049 |
51 | 125-134 | Species | denotes | 2019-nCoV | Tax:2697049 |
52 | 183-191 | Species | denotes | SARS-CoV | Tax:694009 |
53 | 202-215 | Species | denotes | coronaviruses | Tax:11118 |
54 | 315-324 | Species | denotes | 2019-nCoV | Tax:2697049 |
55 | 538-547 | Species | denotes | 2019-nCoV | Tax:2697049 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T2 | 64-71 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T3 | 80-84 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
T4 | 117-121 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
T5 | 304-311 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T6 | 494-505 | Body_part | denotes | cytoplasmic | http://purl.org/sig/ont/fma/fma66835 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T7 | 183-191 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T8 | 346-349 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T26 | 80-84 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T27 | 87-88 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T28 | 117-121 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T29 | 149-152 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
T30 | 166-169 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
T31 | 248-249 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T32 | 330-336 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signal |
T33 | 337-344 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
T34 | 411-418 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
T35 | 490-492 | http://purl.obolibrary.org/obo/PR_000005794 | denotes | CP |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T5 | 64-71 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T6 | 153-155 | Chemical | denotes | SL | http://purl.obolibrary.org/obo/CHEBI_74815 |
T7 | 170-172 | Chemical | denotes | SL | http://purl.obolibrary.org/obo/CHEBI_74815 |
T8 | 304-311 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T9 | 326-328 | Chemical | denotes | SP | http://purl.obolibrary.org/obo/CHEBI_74820 |
T10 | 337-344 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
T11 | 400-402 | Chemical | denotes | FP | http://purl.obolibrary.org/obo/CHEBI_74750 |
T12 | 411-418 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
T13 | 464-466 | Chemical | denotes | TM | http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861 |
T15 | 490-492 | Chemical | denotes | CP | http://purl.obolibrary.org/obo/CHEBI_3380|http://purl.obolibrary.org/obo/CHEBI_73461 |
T17 | 607-617 | Chemical | denotes | inhibitors | http://purl.obolibrary.org/obo/CHEBI_35222 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17 | 0-9 | Sentence | denotes | Figure 1. |
T18 | 10-325 | Sentence | denotes | Analysis of the functional domains in 2019-nCoV spike protein and its gene. (A) Phylogenetic analysis of S gene of 2019-nCoV (Wuhan-Hu-1), bat-SL-CoVZXC21, bat-SL-CoVZXC45, SARS-CoV and other coronaviruses using Neighbor-Joining method. (B) The representative scheme of functional domains in S protein of 2019-nCoV. |
T19 | 326-618 | Sentence | denotes | SP, signal peptide; NTD, N-terminal domain; RBD, receptor-binding domain; FP, fusion peptide, HR1, heptad repeat 1; HR2, heptad repeat 2; TM, transmembrane domain; CP, cytoplasmic domain. (C) The target sites in 2019-nCoV S for development of vaccines, antibodies and fusion/entry inhibitors. |