PMC:7033698 / 9182-10044 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7033698","sourcedb":"PMC","sourceid":"7033698","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7033698","text":"How the three bat CoV viruses obtain those inserts remains unknown. For any virus to obtain additional insert sequences from other organisms, it requires that it has direct interactions with other organisms, most likely through homologous or non-homologous recombination [11]. For bat CoV viruses to gain the gene fragments from HIV-1, it will require both viruses to co-infect the same cells. Because the host cells for bat CoV viruses and HIV-1 are different, the chance for both to exchange genetic materials is negligible. On the contrary, these motifs are widely present in various mammalian cells and so it will be more likely for bat CoV viruses to gain those motifs from the genomes of their infected cells if recombination indeed occurs. However, extensive studies of more CoV viruses in wild and domestic animals are warranted to address this question.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T76","span":{"begin":309,"end":313},"obj":"Body_part"},{"id":"T77","span":{"begin":329,"end":332},"obj":"Body_part"},{"id":"T78","span":{"begin":387,"end":392},"obj":"Body_part"},{"id":"T79","span":{"begin":411,"end":416},"obj":"Body_part"},{"id":"T80","span":{"begin":441,"end":444},"obj":"Body_part"},{"id":"T81","span":{"begin":597,"end":602},"obj":"Body_part"},{"id":"T82","span":{"begin":683,"end":690},"obj":"Body_part"},{"id":"T83","span":{"begin":709,"end":714},"obj":"Body_part"}],"attributes":[{"id":"A76","pred":"fma_id","subj":"T76","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A77","pred":"fma_id","subj":"T77","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A78","pred":"fma_id","subj":"T78","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A79","pred":"fma_id","subj":"T79","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A80","pred":"fma_id","subj":"T80","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A81","pred":"fma_id","subj":"T81","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A82","pred":"fma_id","subj":"T82","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A83","pred":"fma_id","subj":"T83","obj":"http://purl.org/sig/ont/fma/fma68646"},{"subj":"T76","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T77","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T78","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T79","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T80","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T81","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T82","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T83","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T84","span":{"begin":14,"end":17},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T85","span":{"begin":22,"end":29},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T86","span":{"begin":76,"end":81},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T87","span":{"begin":131,"end":140},"obj":"http://purl.obolibrary.org/obo/OBI_0100026"},{"id":"T88","span":{"begin":131,"end":140},"obj":"http://purl.obolibrary.org/obo/UBERON_0000468"},{"id":"T89","span":{"begin":162,"end":165},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T90","span":{"begin":197,"end":206},"obj":"http://purl.obolibrary.org/obo/OBI_0100026"},{"id":"T91","span":{"begin":197,"end":206},"obj":"http://purl.obolibrary.org/obo/UBERON_0000468"},{"id":"T92","span":{"begin":272,"end":274},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T93","span":{"begin":281,"end":284},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T94","span":{"begin":289,"end":296},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T95","span":{"begin":309,"end":313},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T96","span":{"begin":357,"end":364},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T97","span":{"begin":387,"end":392},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T98","span":{"begin":411,"end":416},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T99","span":{"begin":421,"end":424},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T100","span":{"begin":429,"end":436},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T101","span":{"begin":597,"end":602},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T102","span":{"begin":637,"end":640},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T103","span":{"begin":645,"end":652},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T104","span":{"begin":709,"end":714},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T105","span":{"begin":786,"end":793},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T106","span":{"begin":815,"end":822},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"}],"attributes":[{"subj":"T84","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T85","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T86","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T87","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T88","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T90","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T91","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T92","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T94","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T96","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T97","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T98","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T99","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T100","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T101","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T102","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T103","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T104","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T105","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T106","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":246,"end":270},"obj":"http://purl.obolibrary.org/obo/GO_0035825"},{"id":"T2","span":{"begin":485,"end":493},"obj":"http://purl.obolibrary.org/obo/GO_0015297"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T76","span":{"begin":0,"end":67},"obj":"Sentence"},{"id":"T77","span":{"begin":68,"end":276},"obj":"Sentence"},{"id":"T78","span":{"begin":277,"end":393},"obj":"Sentence"},{"id":"T79","span":{"begin":394,"end":526},"obj":"Sentence"},{"id":"T80","span":{"begin":527,"end":746},"obj":"Sentence"},{"id":"T81","span":{"begin":747,"end":862},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T76","pred":"source","obj":"LitCovid-sentences"},{"subj":"T77","pred":"source","obj":"LitCovid-sentences"},{"subj":"T78","pred":"source","obj":"LitCovid-sentences"},{"subj":"T79","pred":"source","obj":"LitCovid-sentences"},{"subj":"T80","pred":"source","obj":"LitCovid-sentences"},{"subj":"T81","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"265","span":{"begin":18,"end":21},"obj":"Species"},{"id":"266","span":{"begin":285,"end":288},"obj":"Species"},{"id":"267","span":{"begin":329,"end":334},"obj":"Species"},{"id":"268","span":{"begin":425,"end":428},"obj":"Species"},{"id":"269","span":{"begin":441,"end":446},"obj":"Species"},{"id":"270","span":{"begin":587,"end":596},"obj":"Species"},{"id":"271","span":{"begin":641,"end":644},"obj":"Species"},{"id":"272","span":{"begin":782,"end":785},"obj":"Species"},{"id":"273","span":{"begin":700,"end":708},"obj":"Disease"}],"attributes":[{"id":"A265","pred":"tao:has_database_id","subj":"265","obj":"Tax:11118"},{"id":"A266","pred":"tao:has_database_id","subj":"266","obj":"Tax:11118"},{"id":"A267","pred":"tao:has_database_id","subj":"267","obj":"Tax:11676"},{"id":"A268","pred":"tao:has_database_id","subj":"268","obj":"Tax:11118"},{"id":"A269","pred":"tao:has_database_id","subj":"269","obj":"Tax:11676"},{"id":"A270","pred":"tao:has_database_id","subj":"270","obj":"Tax:9606"},{"id":"A271","pred":"tao:has_database_id","subj":"271","obj":"Tax:11118"},{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"Tax:11118"},{"id":"A273","pred":"tao:has_database_id","subj":"273","obj":"MESH:D007239"},{"subj":"265","pred":"source","obj":"LitCovid-PubTator"},{"subj":"266","pred":"source","obj":"LitCovid-PubTator"},{"subj":"267","pred":"source","obj":"LitCovid-PubTator"},{"subj":"268","pred":"source","obj":"LitCovid-PubTator"},{"subj":"269","pred":"source","obj":"LitCovid-PubTator"},{"subj":"270","pred":"source","obj":"LitCovid-PubTator"},{"subj":"271","pred":"source","obj":"LitCovid-PubTator"},{"subj":"272","pred":"source","obj":"LitCovid-PubTator"},{"subj":"273","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93caec","default":true},{"id":"LitCovid-PD-CLO","color":"#e4ec93"},{"id":"LitCovid-PD-GO-BP","color":"#d993ec"},{"id":"LitCovid-sentences","color":"#93ecbf"},{"id":"LitCovid-PubTator","color":"#eca593"}]}]}}