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PMC:7033698 / 9182-10044 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T76 309-313 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T77 329-332 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T78 387-392 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T79 411-416 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T80 441-444 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T81 597-602 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T82 683-690 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T83 709-714 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T84 14-17 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T85 22-29 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T86 76-81 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T87 131-140 http://purl.obolibrary.org/obo/OBI_0100026 denotes organisms
T88 131-140 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organisms
T89 162-165 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T90 197-206 http://purl.obolibrary.org/obo/OBI_0100026 denotes organisms
T91 197-206 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organisms
T92 272-274 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T93 281-284 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T94 289-296 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T95 309-313 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T96 357-364 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T97 387-392 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T98 411-416 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T99 421-424 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T100 429-436 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T101 597-602 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T102 637-640 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T103 645-652 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T104 709-714 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T105 786-793 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T106 815-822 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 246-270 http://purl.obolibrary.org/obo/GO_0035825 denotes homologous recombination
T2 485-493 http://purl.obolibrary.org/obo/GO_0015297 denotes exchange

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T76 0-67 Sentence denotes How the three bat CoV viruses obtain those inserts remains unknown.
T77 68-276 Sentence denotes For any virus to obtain additional insert sequences from other organisms, it requires that it has direct interactions with other organisms, most likely through homologous or non-homologous recombination [11].
T78 277-393 Sentence denotes For bat CoV viruses to gain the gene fragments from HIV-1, it will require both viruses to co-infect the same cells.
T79 394-526 Sentence denotes Because the host cells for bat CoV viruses and HIV-1 are different, the chance for both to exchange genetic materials is negligible.
T80 527-746 Sentence denotes On the contrary, these motifs are widely present in various mammalian cells and so it will be more likely for bat CoV viruses to gain those motifs from the genomes of their infected cells if recombination indeed occurs.
T81 747-862 Sentence denotes However, extensive studies of more CoV viruses in wild and domestic animals are warranted to address this question.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
265 18-21 Species denotes CoV Tax:11118
266 285-288 Species denotes CoV Tax:11118
267 329-334 Species denotes HIV-1 Tax:11676
268 425-428 Species denotes CoV Tax:11118
269 441-446 Species denotes HIV-1 Tax:11676
270 587-596 Species denotes mammalian Tax:9606
271 641-644 Species denotes CoV Tax:11118
272 782-785 Species denotes CoV Tax:11118
273 700-708 Disease denotes infected MESH:D007239