PMC:7004396 / 4112-6055
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T304 | 1270-1281 | NCBITaxon:11118 | denotes | coronavirus |
T106 | 64-70 | NCBITaxon:9606 | denotes | person |
T105 | 107-116 | SP_7 | denotes | 2019-nCoV |
T104 | 174-181 | NCBITaxon:9606 | denotes | persons |
T103 | 457-466 | SP_7 | denotes | 2019-nCoV |
T102 | 495-516 | GO:0001171 | denotes | reverse transcription |
T101 | 1177-1183 | GO:0016265 | denotes | deaths |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T14 | 107-126 | Disease | denotes | 2019-nCoV infection | http://purl.obolibrary.org/obo/MONDO_0100096 |
T15 | 117-126 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T16 | 457-476 | Disease | denotes | 2019-nCoV infection | http://purl.obolibrary.org/obo/MONDO_0100096 |
T17 | 467-476 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 159-160 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T26 | 170-173 | http://purl.obolibrary.org/obo/CLO_0001230 | denotes | 293 |
T27 | 170-173 | http://purl.obolibrary.org/obo/CLO_0037237 | denotes | 293 |
T28 | 170-173 | http://purl.obolibrary.org/obo/CLO_0050903 | denotes | 293 |
T29 | 170-173 | http://purl.obolibrary.org/obo/CLO_0054249 | denotes | 293 |
T30 | 170-173 | http://purl.obolibrary.org/obo/CLO_0054250 | denotes | 293 |
T31 | 170-173 | http://purl.obolibrary.org/obo/CLO_0054251 | denotes | 293 |
T32 | 170-173 | http://purl.obolibrary.org/obo/CLO_0054252 | denotes | 293 |
T33 | 187-189 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
T34 | 430-432 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T35 | 483-484 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T36 | 571-574 | http://purl.obolibrary.org/obo/CL_0000990 | denotes | CDC |
T37 | 582-584 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T38 | 817-818 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T39 | 1293-1295 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T40 | 1471-1475 | http://purl.obolibrary.org/obo/CLO_0001053 | denotes | 1/21 |
T41 | 1588-1590 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
T42 | 1628-1630 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
T43 | 1851-1853 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T44 | 1926-1932 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
T45 | 1938-1942 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
T46 | 1938-1942 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T2 | 1938-1942 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 495-516 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
T2 | 503-516 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22 | 0-26 | Sentence | denotes | Epidemiology of First U.S. |
T23 | 27-32 | Sentence | denotes | Cases |
T24 | 33-140 | Sentence | denotes | On January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. |
T25 | 141-236 | Sentence | denotes | As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. |
T26 | 237-414 | Sentence | denotes | Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. |
T27 | 415-575 | Sentence | denotes | Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. |
T28 | 576-630 | Sentence | denotes | These 11 cases were diagnosed in the following states: |
T29 | 631-730 | Sentence | denotes | Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). |
T30 | 731-771 | Sentence | denotes | Nine cases were in travelers from Wuhan. |
T31 | 772-942 | Sentence | denotes | Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. |
T32 | 943-1107 | Sentence | denotes | Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. |
T33 | 1108-1173 | Sentence | denotes | All patients are being monitored closely for progressing illness. |
T34 | 1174-1224 | Sentence | denotes | No deaths have been reported in the United States. |
T35 | 1225-1341 | Sentence | denotes | TABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020 |
T36 | 1342-1440 | Sentence | denotes | Case State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced |
T37 | 1441-1480 | Sentence | denotes | 1 Washington 30s M Wuhan 1/21/2020 |
T38 | 1481-1518 | Sentence | denotes | 2 Illinois 60s F Wuhan 1/24/2020 |
T39 | 1519-1555 | Sentence | denotes | 3 Arizona 20s M Wuhan 1/26/2020 |
T40 | 1556-1595 | Sentence | denotes | 4 California 30s M Wuhan 1/27/2020 |
T41 | 1596-1635 | Sentence | denotes | 5 California 50s M Wuhan 1/27/2020 |
T42 | 1636-1686 | Sentence | denotes | 6 Illinois 60s M Household Illinois 1/30/2020 |
T43 | 1687-1726 | Sentence | denotes | 7 California 40s M Wuhan 1/31/2020 |
T44 | 1727-1769 | Sentence | denotes | 8 Massachusetts 20s M Wuhan 2/01/2020 |
T45 | 1770-1809 | Sentence | denotes | 9 California 50s F Wuhan 2/02/2020 |
T46 | 1810-1850 | Sentence | denotes | 10 California 50s M Wuhan 2/02/2020 |
T47 | 1851-1906 | Sentence | denotes | 11 California 50s F Household California 2/02/2020 |
T48 | 1907-1921 | Sentence | denotes | Abbreviations: |
T49 | 1922-1943 | Sentence | denotes | F = female; M = male. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
93 | 174-181 | Species | denotes | persons | Tax:9606 |
94 | 294-301 | Species | denotes | patient | Tax:9606 |
95 | 433-441 | Species | denotes | patients | Tax:9606 |
96 | 829-837 | Species | denotes | patients | Tax:9606 |
97 | 1112-1120 | Species | denotes | patients | Tax:9606 |
98 | 107-126 | Disease | denotes | 2019-nCoV infection | MESH:C000657245 |
99 | 457-476 | Disease | denotes | 2019-nCoV infection | MESH:C000657245 |
100 | 966-989 | Disease | denotes | California and Illinois | MESH:D004670 |
101 | 1177-1183 | Disease | denotes | deaths | MESH:D003643 |
103 | 1259-1281 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |