PMC:7004396 / 4112-6055
Annnotations
LitCovid-PMC-OGER-BB
{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T304","span":{"begin":1270,"end":1281},"obj":"NCBITaxon:11118"},{"id":"T106","span":{"begin":64,"end":70},"obj":"NCBITaxon:9606"},{"id":"T105","span":{"begin":107,"end":116},"obj":"SP_7"},{"id":"T104","span":{"begin":174,"end":181},"obj":"NCBITaxon:9606"},{"id":"T103","span":{"begin":457,"end":466},"obj":"SP_7"},{"id":"T102","span":{"begin":495,"end":516},"obj":"GO:0001171"},{"id":"T101","span":{"begin":1177,"end":1183},"obj":"GO:0016265"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T14","span":{"begin":107,"end":126},"obj":"Disease"},{"id":"T15","span":{"begin":117,"end":126},"obj":"Disease"},{"id":"T16","span":{"begin":457,"end":476},"obj":"Disease"},{"id":"T17","span":{"begin":467,"end":476},"obj":"Disease"}],"attributes":[{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T25","span":{"begin":159,"end":160},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T26","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0001230"},{"id":"T27","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0037237"},{"id":"T28","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0050903"},{"id":"T29","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0054249"},{"id":"T30","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0054250"},{"id":"T31","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0054251"},{"id":"T32","span":{"begin":170,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0054252"},{"id":"T33","span":{"begin":187,"end":189},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"},{"id":"T34","span":{"begin":430,"end":432},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T35","span":{"begin":483,"end":484},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T36","span":{"begin":571,"end":574},"obj":"http://purl.obolibrary.org/obo/CL_0000990"},{"id":"T37","span":{"begin":582,"end":584},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T38","span":{"begin":817,"end":818},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T39","span":{"begin":1293,"end":1295},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T40","span":{"begin":1471,"end":1475},"obj":"http://purl.obolibrary.org/obo/CLO_0001053"},{"id":"T41","span":{"begin":1588,"end":1590},"obj":"http://purl.obolibrary.org/obo/CLO_0050509"},{"id":"T42","span":{"begin":1628,"end":1630},"obj":"http://purl.obolibrary.org/obo/CLO_0050509"},{"id":"T43","span":{"begin":1851,"end":1853},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T44","span":{"begin":1926,"end":1932},"obj":"http://purl.obolibrary.org/obo/UBERON_0003100"},{"id":"T45","span":{"begin":1938,"end":1942},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T46","span":{"begin":1938,"end":1942},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":1938,"end":1942},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_30780"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":495,"end":516},"obj":"http://purl.obolibrary.org/obo/GO_0001171"},{"id":"T2","span":{"begin":503,"end":516},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T22","span":{"begin":0,"end":26},"obj":"Sentence"},{"id":"T23","span":{"begin":27,"end":32},"obj":"Sentence"},{"id":"T24","span":{"begin":33,"end":140},"obj":"Sentence"},{"id":"T25","span":{"begin":141,"end":236},"obj":"Sentence"},{"id":"T26","span":{"begin":237,"end":414},"obj":"Sentence"},{"id":"T27","span":{"begin":415,"end":575},"obj":"Sentence"},{"id":"T28","span":{"begin":576,"end":630},"obj":"Sentence"},{"id":"T29","span":{"begin":631,"end":730},"obj":"Sentence"},{"id":"T30","span":{"begin":731,"end":771},"obj":"Sentence"},{"id":"T31","span":{"begin":772,"end":942},"obj":"Sentence"},{"id":"T32","span":{"begin":943,"end":1107},"obj":"Sentence"},{"id":"T33","span":{"begin":1108,"end":1173},"obj":"Sentence"},{"id":"T34","span":{"begin":1174,"end":1224},"obj":"Sentence"},{"id":"T35","span":{"begin":1225,"end":1341},"obj":"Sentence"},{"id":"T36","span":{"begin":1342,"end":1440},"obj":"Sentence"},{"id":"T37","span":{"begin":1441,"end":1480},"obj":"Sentence"},{"id":"T38","span":{"begin":1481,"end":1518},"obj":"Sentence"},{"id":"T39","span":{"begin":1519,"end":1555},"obj":"Sentence"},{"id":"T40","span":{"begin":1556,"end":1595},"obj":"Sentence"},{"id":"T41","span":{"begin":1596,"end":1635},"obj":"Sentence"},{"id":"T42","span":{"begin":1636,"end":1686},"obj":"Sentence"},{"id":"T43","span":{"begin":1687,"end":1726},"obj":"Sentence"},{"id":"T44","span":{"begin":1727,"end":1769},"obj":"Sentence"},{"id":"T45","span":{"begin":1770,"end":1809},"obj":"Sentence"},{"id":"T46","span":{"begin":1810,"end":1850},"obj":"Sentence"},{"id":"T47","span":{"begin":1851,"end":1906},"obj":"Sentence"},{"id":"T48","span":{"begin":1907,"end":1921},"obj":"Sentence"},{"id":"T49","span":{"begin":1922,"end":1943},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"93","span":{"begin":174,"end":181},"obj":"Species"},{"id":"94","span":{"begin":294,"end":301},"obj":"Species"},{"id":"95","span":{"begin":433,"end":441},"obj":"Species"},{"id":"96","span":{"begin":829,"end":837},"obj":"Species"},{"id":"97","span":{"begin":1112,"end":1120},"obj":"Species"},{"id":"98","span":{"begin":107,"end":126},"obj":"Disease"},{"id":"99","span":{"begin":457,"end":476},"obj":"Disease"},{"id":"100","span":{"begin":966,"end":989},"obj":"Disease"},{"id":"101","span":{"begin":1177,"end":1183},"obj":"Disease"},{"id":"103","span":{"begin":1259,"end":1281},"obj":"Species"}],"attributes":[{"id":"A93","pred":"tao:has_database_id","subj":"93","obj":"Tax:9606"},{"id":"A94","pred":"tao:has_database_id","subj":"94","obj":"Tax:9606"},{"id":"A95","pred":"tao:has_database_id","subj":"95","obj":"Tax:9606"},{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"Tax:9606"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"Tax:9606"},{"id":"A98","pred":"tao:has_database_id","subj":"98","obj":"MESH:C000657245"},{"id":"A99","pred":"tao:has_database_id","subj":"99","obj":"MESH:C000657245"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"MESH:D004670"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D003643"},{"id":"A103","pred":"tao:has_database_id","subj":"103","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Epidemiology of First U.S. Cases\nOn January 21, 2020, the first person in the United States with diagnosed 2019-nCoV infection was reported. As of February 4, a total of 293 persons from 36 states, the District of Columbia, and the U.S. Virgin Islands were under investigation based on current patient under investigation (PUI) definitions,¶ and also included those being evaluated because they are close contacts. Of these PUIs, 11 patients have confirmed 2019-nCoV infection using a real-time reverse transcription–polymerase chain reaction (RT-PCR) assay developed by CDC. These 11 cases were diagnosed in the following states: Arizona (one), California (six), Illinois (two), Massachusetts (one), and Washington (one) (Table). Nine cases were in travelers from Wuhan. Eight of these nine cases were identified as a result of patients seeking clinical care for symptoms and clinicians connecting with the appropriate public health systems. Two cases (one each in California and Illinois) occurred in close contacts of two confirmed cases and were diagnosed as part of routine monitoring of case contacts. All patients are being monitored closely for progressing illness. No deaths have been reported in the United States.\nTABLE Characteristics of initial 2019 novel coronavirus cases (N = 11) — United States, January 21–February 4, 2020\nCase State Approximate age (yrs) Sex Place of exposure Date laboratory confirmation announced\n1 Washington 30s M Wuhan 1/21/2020\n2 Illinois 60s F Wuhan 1/24/2020\n3 Arizona 20s M Wuhan 1/26/2020\n4 California 30s M Wuhan 1/27/2020\n5 California 50s M Wuhan 1/27/2020\n6 Illinois 60s M Household Illinois 1/30/2020\n7 California 40s M Wuhan 1/31/2020\n8 Massachusetts 20s M Wuhan 2/01/2020\n9 California 50s F Wuhan 2/02/2020\n10 California 50s M Wuhan 2/02/2020\n11 California 50s F Household California 2/02/2020\nAbbreviations: F = female; M = male."}