PMC:6988269 / 12673-13620
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T53 | 81-84 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T54 | 142-145 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T55 | 224-227 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T56 | 234-238 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T57 | 278-281 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T58 | 291-295 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T59 | 334-337 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T60 | 344-348 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T61 | 411-414 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T62 | 433-437 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T63 | 499-502 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T64 | 519-523 | Body_part | denotes | axis | http://purl.org/sig/ont/fma/fma12520 |
| T65 | 536-539 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T66 | 567-571 | Body_part | denotes | axis | http://purl.org/sig/ont/fma/fma12520 |
| T67 | 729-733 | Body_part | denotes | axis | http://purl.org/sig/ont/fma/fma12520 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T39 | 56-60 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T40 | 261-269 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T41 | 261-265 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T42 | 317-325 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 317-321 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T114 | 229-233 | http://purl.obolibrary.org/obo/CLO_0051456 | denotes | A: E |
| T115 | 234-238 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T116 | 283-284 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T117 | 291-295 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T118 | 344-348 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T119 | 433-437 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T120 | 694-701 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T121 | 848-856 | http://purl.obolibrary.org/obo/UBERON_0000033 | denotes | headings |
| T122 | 848-856 | http://www.ebi.ac.uk/efo/EFO_0000964 | denotes | headings |
| T123 | 876-877 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T105 | 0-145 | Sentence | denotes | Figure 3 Determination of limits of detection based on SARS coronavirus genomic RNA and 2019 novel coronavirus-specific in vitro transcribed RNA |
| T106 | 146-228 | Sentence | denotes | CI: confidence intervals; c/r: copies per reaction; IVT: in vitro-transcribed RNA. |
| T107 | 229-231 | Sentence | denotes | A: |
| T108 | 232-282 | Sentence | denotes | E gene assay, evaluated with SARS-CoV genomic RNA. |
| T109 | 283-285 | Sentence | denotes | B: |
| T110 | 286-338 | Sentence | denotes | RdRp gene assay evaluated with SARS-CoV genomic RNA. |
| T111 | 339-424 | Sentence | denotes | C: E-gene assay, evaluated with 2019-nCoV-specific in vitro-transcribed RNA standard. |
| T112 | 425-427 | Sentence | denotes | D: |
| T113 | 428-512 | Sentence | denotes | RdRp gene assay evaluated with 2019-nCoV-specific in vitro-transcribed RNA standard. |
| T114 | 513-560 | Sentence | denotes | The x-axis shows input RNA copies per reaction. |
| T115 | 561-793 | Sentence | denotes | The y-axis shows positive results in all parallel reactions performed, squares are experimental data points resulting from replicate testing of given concentrations (x-axis) in parallels assays (eight replicate reactions per point). |
| T116 | 794-857 | Sentence | denotes | Technical limits of detection are given in the panels headings. |
| T117 | 858-912 | Sentence | denotes | The inner line is a probit curve (dose-response rule). |
| T118 | 913-947 | Sentence | denotes | The outer dotted lines are 95% CI. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 216 | 56-72 | Species | denotes | SARS coronavirus | Tax:694009 |
| 217 | 89-111 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |
| 219 | 172-175 | Gene | denotes | c/r | |
| 226 | 286-290 | Gene | denotes | RdRp | Gene:43740578 |
| 227 | 428-432 | Gene | denotes | RdRp | Gene:43740578 |
| 228 | 261-269 | Species | denotes | SARS-CoV | Tax:694009 |
| 229 | 317-325 | Species | denotes | SARS-CoV | Tax:694009 |
| 230 | 371-380 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 231 | 459-468 | Species | denotes | 2019-nCoV | Tax:2697049 |