PMC:3589482 / 42897-43022
Annnotations
bionlp-st-ge-2016-spacy-parsed
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pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T19301","span":{"begin":81,"end":84},"obj":"CC"},{"id":"T19300","span":{"begin":68,"end":80},"obj":"JJ"},{"id":"T19299","span":{"begin":63,"end":67},"obj":"CC"},{"id":"T19298","span":{"begin":59,"end":62},"obj":"IN"},{"id":"T19297","span":{"begin":47,"end":58},"obj":"NN"},{"id":"T19296","span":{"begin":41,"end":46},"obj":"JJ"},{"id":"T19295","span":{"begin":39,"end":40},"obj":"DT"},{"id":"T19294","span":{"begin":36,"end":38},"obj":"VB"},{"id":"T19293","span":{"begin":33,"end":35},"obj":"TO"},{"id":"T19292","span":{"begin":27,"end":32},"obj":"VB"},{"id":"T19291","span":{"begin":23,"end":26},"obj":"VB"},{"id":"T19290","span":{"begin":15,"end":22},"obj":"NN"},{"id":"T19289","span":{"begin":13,"end":14},"obj":"-COMMA-"},{"id":"T19288","span":{"begin":8,"end":13},"obj":"NN"},{"id":"T19287","span":{"begin":3,"end":7},"obj":"DT"},{"id":"T19286","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T19305","span":{"begin":111,"end":124},"obj":"NN"},{"id":"T19304","span":{"begin":106,"end":110},"obj":"NN"},{"id":"T19303","span":{"begin":97,"end":105},"obj":"NN"},{"id":"T19302","span":{"begin":85,"end":96},"obj":"JJ"}],"relations":[{"id":"R13760","pred":"arg2Of","subj":"T19288","obj":"T19286"},{"id":"R13761","pred":"arg1Of","subj":"T19288","obj":"T19287"},{"id":"R13762","pred":"arg1Of","subj":"T19290","obj":"T19291"},{"id":"R13763","pred":"arg2Of","subj":"T19290","obj":"T19292"},{"id":"R13764","pred":"arg1Of","subj":"T19290","obj":"T19294"},{"id":"R13765","pred":"arg1Of","subj":"T19292","obj":"T19286"},{"id":"R13766","pred":"arg1Of","subj":"T19292","obj":"T19289"},{"id":"R13767","pred":"arg2Of","subj":"T19292","obj":"T19291"},{"id":"R13768","pred":"arg3Of","subj":"T19294","obj":"T19292"},{"id":"R13769","pred":"arg1Of","subj":"T19294","obj":"T19293"},{"id":"R13770","pred":"arg2Of","subj":"T19297","obj":"T19294"},{"id":"R13771","pred":"arg1Of","subj":"T19297","obj":"T19295"},{"id":"R13772","pred":"arg1Of","subj":"T19297","obj":"T19296"},{"id":"R13773","pred":"arg1Of","subj":"T19297","obj":"T19298"},{"id":"R13774","pred":"arg1Of","subj":"T19300","obj":"T19301"},{"id":"R13775","pred":"arg2Of","subj":"T19302","obj":"T19301"},{"id":"R13776","pred":"arg2Of","subj":"T19305","obj":"T19298"},{"id":"R13777","pred":"arg1Of","subj":"T19305","obj":"T19299"},{"id":"R13778","pred":"arg1Of","subj":"T19305","obj":"T19300"},{"id":"R13779","pred":"arg1Of","subj":"T19305","obj":"T19302"},{"id":"R13780","pred":"arg1Of","subj":"T19305","obj":"T19303"},{"id":"R13781","pred":"arg1Of","subj":"T19305","obj":"T19304"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T18737","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T18736","span":{"begin":15,"end":22},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20250","span":{"begin":15,"end":22},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T20219","span":{"begin":97,"end":105},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T18803","span":{"begin":111,"end":124},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
sentences
{"project":"sentences","denotations":[{"id":"T18492","span":{"begin":0,"end":125},"obj":"Sentence"},{"id":"T257","span":{"begin":0,"end":125},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
simple1
{"project":"simple1","denotations":[{"id":"T18874","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T18873","span":{"begin":15,"end":22},"obj":"Protein"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T20082","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T20081","span":{"begin":15,"end":22},"obj":"Protein"},{"id":"T20160","span":{"begin":85,"end":96},"obj":"Positive_regulation"},{"id":"T20159","span":{"begin":111,"end":124},"obj":"Transcription"},{"id":"T20158","span":{"begin":47,"end":58},"obj":"Positive_regulation"}],"relations":[{"id":"R14520","pred":"causeOf","subj":"T20081","obj":"T20158"},{"id":"R14521","pred":"causeOf","subj":"T20081","obj":"T20158"},{"id":"R14522","pred":"causeOf","subj":"T20081","obj":"T20158"},{"id":"R14523","pred":"themeOf","subj":"T20082","obj":"T20158"},{"id":"R14524","pred":"themeOf","subj":"T20082","obj":"T20160"},{"id":"R14584","pred":"themeOf","subj":"T20159","obj":"T20158"},{"id":"R14585","pred":"themeOf","subj":"T20160","obj":"T20158"},{"id":"R14525","pred":"themeOf","subj":"T20082","obj":"T20159"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T20532","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T20531","span":{"begin":15,"end":22},"obj":"Protein"},{"id":"T20600","span":{"begin":85,"end":96},"obj":"Positive_regulation"},{"id":"T20599","span":{"begin":111,"end":124},"obj":"Transcription"}],"relations":[{"id":"R14740","pred":"themeOf","subj":"T20532","obj":"T20600"},{"id":"R14741","pred":"themeOf","subj":"T20532","obj":"T20599"},{"id":"R14784","pred":"themeOf","subj":"T20599","obj":"T20600"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T20380","span":{"begin":85,"end":96},"obj":"Positive_regulation"},{"id":"T20379","span":{"begin":47,"end":58},"obj":"Positive_regulation"},{"id":"T20378","span":{"begin":111,"end":124},"obj":"Transcription"},{"id":"T20306","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T20305","span":{"begin":15,"end":22},"obj":"Protein"}],"relations":[{"id":"R14629","pred":"causeOf","subj":"T20305","obj":"T20379"},{"id":"R14630","pred":"themeOf","subj":"T20306","obj":"T20378"},{"id":"R14676","pred":"themeOf","subj":"T20378","obj":"T20379"},{"id":"R14677","pred":"themeOf","subj":"T20378","obj":"T20380"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21093","span":{"begin":63,"end":124},"obj":"Transcription"},{"id":"T20999","span":{"begin":85,"end":96},"obj":"Entity"},{"id":"T20998","span":{"begin":63,"end":124},"obj":"Protein"},{"id":"T20933","span":{"begin":106,"end":110},"obj":"Protein"},{"id":"T20926","span":{"begin":15,"end":22},"obj":"Protein"}],"relations":[{"id":"R14936","pred":"themeOf","subj":"T20933","obj":"T21093"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T20685","span":{"begin":15,"end":22},"obj":"Protein"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
testone
{"project":"testone","denotations":[{"id":"T18250","span":{"begin":89,"end":96},"obj":"Positive_regulation"},{"id":"T18249","span":{"begin":47,"end":58},"obj":"Positive_regulation"},{"id":"T18185","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T18184","span":{"begin":15,"end":22},"obj":"Protein"}],"relations":[{"id":"R13119","pred":"causeOf","subj":"T18184","obj":"T18249"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}
test3
{"project":"test3","denotations":[{"id":"T18388","span":{"begin":111,"end":124},"obj":"Transcription"},{"id":"T18387","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T18386","span":{"begin":89,"end":96},"obj":"Positive_regulation"},{"id":"T18385","span":{"begin":15,"end":22},"obj":"Protein"},{"id":"T18302","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T18301","span":{"begin":15,"end":22},"obj":"Protein"}],"relations":[{"id":"R13175","pred":"causeOf","subj":"T18385","obj":"T18386"},{"id":"R13176","pred":"themeOf","subj":"T18387","obj":"T18388"},{"id":"R13177","pred":"themeOf","subj":"T18388","obj":"T18386"}],"text":"In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription."}