> top > docs > PMC:3589482 > spans > 42897-43022 > annotations

PMC:3589482 / 42897-43022 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21538 124-125 . denotes .
T21537 111-124 NN denotes transcription
T21536 106-110 NN denotes gene
T21535 97-105 JJ denotes SerpinB2
T21534 85-96 JJ denotes LPS-induced
T21533 81-84 CC denotes and
T21532 68-80 JJ denotes constitutive
T21531 63-67 DT denotes both
T21530 59-62 IN denotes for
T21529 47-58 NN denotes requirement
T21528 41-46 JJ denotes major
T21527 39-40 DT denotes a
T21526 36-38 VB denotes be
T21525 33-35 TO denotes to
T21524 27-32 VBN denotes found
T21523 23-26 VBD denotes was
T21522 21-22 NN denotes β
T21521 20-21 : denotes -
T21520 15-20 NNP denotes C/EBP
T21519 13-14 , denotes ,
T21518 8-13 NN denotes study
T21517 3-7 DT denotes this
T21516 0-2 IN denotes In
R15377 T21516 T21524 prep In,found
R15378 T21517 T21518 det this,study
R15379 T21518 T21516 pobj study,In
R15380 T21519 T21524 punct ",",found
R15381 T21520 T21522 compound C/EBP,β
R15382 T21521 T21522 punct -,β
R15383 T21522 T21524 nsubjpass β,found
R15384 T21523 T21524 auxpass was,found
R15385 T21524 T21524 ROOT found,found
R15386 T21525 T21526 aux to,be
R15387 T21526 T21524 xcomp be,found
R15388 T21527 T21529 det a,requirement
R15389 T21528 T21529 amod major,requirement
R15390 T21529 T21526 attr requirement,be
R15391 T21530 T21529 prep for,requirement
R15392 T21531 T21532 preconj both,constitutive
R15393 T21532 T21537 nmod constitutive,transcription
R15394 T21533 T21532 cc and,constitutive
R15395 T21534 T21532 conj LPS-induced,constitutive
R15396 T21535 T21537 amod SerpinB2,transcription
R15397 T21536 T21537 compound gene,transcription
R15398 T21537 T21530 pobj transcription,for
R15399 T21538 T21524 punct .,found

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19301 81-84 CC denotes and
T19300 68-80 JJ denotes constitutive
T19299 63-67 CC denotes both
T19298 59-62 IN denotes for
T19297 47-58 NN denotes requirement
T19296 41-46 JJ denotes major
T19295 39-40 DT denotes a
T19294 36-38 VB denotes be
T19293 33-35 TO denotes to
T19292 27-32 VB denotes found
T19291 23-26 VB denotes was
T19290 15-22 NN denotes C/EBP-β
T19289 13-14 -COMMA- denotes ,
T19288 8-13 NN denotes study
T19287 3-7 DT denotes this
T19286 0-2 IN denotes In
T19305 111-124 NN denotes transcription
T19304 106-110 NN denotes gene
T19303 97-105 NN denotes SerpinB2
T19302 85-96 JJ denotes LPS-induced
R13760 T19288 T19286 arg2Of study,In
R13761 T19288 T19287 arg1Of study,this
R13762 T19290 T19291 arg1Of C/EBP-β,was
R13763 T19290 T19292 arg2Of C/EBP-β,found
R13764 T19290 T19294 arg1Of C/EBP-β,be
R13765 T19292 T19286 arg1Of found,In
R13766 T19292 T19289 arg1Of found,","
R13767 T19292 T19291 arg2Of found,was
R13768 T19294 T19292 arg3Of be,found
R13769 T19294 T19293 arg1Of be,to
R13770 T19297 T19294 arg2Of requirement,be
R13771 T19297 T19295 arg1Of requirement,a
R13772 T19297 T19296 arg1Of requirement,major
R13773 T19297 T19298 arg1Of requirement,for
R13774 T19300 T19301 arg1Of constitutive,and
R13775 T19302 T19301 arg2Of LPS-induced,and
R13776 T19305 T19298 arg2Of transcription,for
R13777 T19305 T19299 arg1Of transcription,both
R13778 T19305 T19300 arg1Of transcription,constitutive
R13779 T19305 T19302 arg1Of transcription,LPS-induced
R13780 T19305 T19303 arg1Of transcription,SerpinB2
R13781 T19305 T19304 arg1Of transcription,gene

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18737 97-105 Protein denotes SerpinB2
T18736 15-22 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20250 15-22 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20219 97-105 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T18803 111-124 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

sentences

Id Subject Object Predicate Lexical cue
T18492 0-125 Sentence denotes In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription.
T257 0-125 Sentence denotes In this study, C/EBP-β was found to be a major requirement for both constitutive and LPS-induced SerpinB2 gene transcription.

simple1

Id Subject Object Predicate Lexical cue
T18874 97-105 Protein denotes SerpinB2
T18873 15-22 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20082 97-105 Protein denotes SerpinB2
T20081 15-22 Protein denotes C/EBP-β
T20160 85-96 Positive_regulation denotes LPS-induced
T20159 111-124 Transcription denotes transcription
T20158 47-58 Positive_regulation denotes requirement
R14520 T20081 T20158 causeOf C/EBP-β,requirement
R14521 T20081 T20158 causeOf C/EBP-β,requirement
R14522 T20081 T20158 causeOf C/EBP-β,requirement
R14523 T20082 T20158 themeOf SerpinB2,requirement
R14524 T20082 T20160 themeOf SerpinB2,LPS-induced
R14584 T20159 T20158 themeOf transcription,requirement
R14585 T20160 T20158 themeOf LPS-induced,requirement
R14525 T20082 T20159 themeOf SerpinB2,transcription

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20532 97-105 Protein denotes SerpinB2
T20531 15-22 Protein denotes C/EBP-β
T20600 85-96 Positive_regulation denotes LPS-induced
T20599 111-124 Transcription denotes transcription
R14740 T20532 T20600 themeOf SerpinB2,LPS-induced
R14741 T20532 T20599 themeOf SerpinB2,transcription
R14784 T20599 T20600 themeOf transcription,LPS-induced

DLUT931

Id Subject Object Predicate Lexical cue
T20380 85-96 Positive_regulation denotes LPS-induced
T20379 47-58 Positive_regulation denotes requirement
T20378 111-124 Transcription denotes transcription
T20306 97-105 Protein denotes SerpinB2
T20305 15-22 Protein denotes C/EBP-β
R14629 T20305 T20379 causeOf C/EBP-β,requirement
R14630 T20306 T20378 themeOf SerpinB2,transcription
R14676 T20378 T20379 themeOf transcription,requirement
R14677 T20378 T20380 themeOf transcription,LPS-induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21093 63-124 Transcription denotes both constitutive and LPS-induced SerpinB2 gene transcription
T20999 85-96 Entity denotes LPS-induced
T20998 63-124 Protein denotes both constitutive and LPS-induced SerpinB2 gene transcription
T20933 106-110 Protein denotes gene
T20926 15-22 Protein denotes C/EBP-β
R14936 T20933 T21093 themeOf gene,both constitutive and LPS-induced SerpinB2 gene transcription

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20685 15-22 Protein denotes C/EBP-β

testone

Id Subject Object Predicate Lexical cue
T18250 89-96 Positive_regulation denotes induced
T18249 47-58 Positive_regulation denotes requirement
T18185 97-105 Protein denotes SerpinB2
T18184 15-22 Protein denotes C/EBP-β
R13119 T18184 T18249 causeOf C/EBP-β,requirement

test3

Id Subject Object Predicate Lexical cue
T18388 111-124 Transcription denotes transcription
T18387 97-105 Protein denotes SerpinB2
T18386 89-96 Positive_regulation denotes induced
T18385 15-22 Protein denotes C/EBP-β
T18302 97-105 Protein denotes SerpinB2
T18301 15-22 Protein denotes C/EBP-β
R13175 T18385 T18386 causeOf C/EBP-β,induced
R13176 T18387 T18388 themeOf SerpinB2,transcription
R13177 T18388 T18386 themeOf transcription,induced