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PMC:3585731 / 5019-5657 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T2859 497-506 Protein denotes caspase-8
T2858 453-457 Protein denotes TNFα
T2857 270-300 Protein denotes Basic Fibroblast Growth Factor
T825 62-72 Gene_expression denotes production
T824 49-53 Regulation denotes link
T813 57-61 Protein denotes TNFα
R499 T813 T825 themeOf TNFα,production
R504 T825 T824 themeOf production,link

2_test

Id Subject Object Predicate Lexical cue
23469174-19109899-90505413 459-461 19109899 denotes 10
23469174-16408008-90505414 465-467 16408008 denotes 17

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3277 620-627 VB denotes trigger
T3276 617-619 TO denotes to
T3275 606-616 JJ denotes sufficient
T3274 603-605 VB denotes is
T3273 601-602 -COMMA- denotes ,
T3272 593-601 NN denotes zVAD.fmk
T3271 591-592 -COMMA- denotes ,
T3270 582-591 NN denotes inhibitor
T3269 570-581 NN denotes pan-caspase
T3268 566-569 DT denotes the
T3267 560-565 VB denotes using
T3266 557-559 IN denotes by
T3265 554-556 CC denotes or
T3264 544-553 NN denotes knockdown
T3263 538-543 NN denotes siRNA
T3262 530-537 IN denotes through
T3261 523-529 CC denotes either
T3260 521-522 -COMMA- denotes ,
T3259 516-521 RB denotes alone
T3258 507-515 NN denotes activity
T3257 497-506 NN denotes caspase-8
T3256 494-496 IN denotes of
T3255 483-493 NN denotes inhibition
T3254 481-482 -COMMA- denotes ,
T3253 473-481 NN denotes addition
T3252 470-472 IN denotes In
T3251 467-468 -RRB- denotes ]
T3250 465-467 CD denotes 17
T3249 464-465 -LRB- denotes [
T3248 462-463 -COMMA- denotes ,
T3247 461-462 -RRB- denotes ]
T3246 459-461 CD denotes 10
T3245 458-459 -LRB- denotes [
T3244 453-457 NN denotes TNFα
T3243 448-452 IN denotes with
T3242 436-447 NN denotes stimulation
T3241 426-435 VB denotes following
T3240 420-425 NN denotes death
T3239 415-419 NN denotes cell
T3238 403-414 JJ denotes necroptotic
T3237 395-402 VB denotes undergo
T3236 389-394 NN denotes cells
T3235 384-388 NN denotes L929
T3234 371-383 NN denotes fibrosarcoma
T3233 365-370 NN denotes mouse
T3232 360-364 IN denotes that
T3231 348-359 VB denotes established
T3230 343-347 VB denotes been
T3229 339-342 VB denotes has
T3228 336-338 PRP denotes It
T3227 330-335 NN denotes Cells
T3226 325-329 NN denotes L929
T3225 322-324 IN denotes in
T3224 310-321 NNP denotes Necroptosis
T3223 301-309 NNP denotes Promotes
T3222 294-300 NNP denotes Factor
T3221 287-293 NNP denotes Growth
T3220 276-286 NN denotes Fibroblast
T1749 249-258 NN denotes signaling
T1748 236-248 JJ denotes inflammatory
T1747 216-235 JJ denotes necrosis-associated
T1746 212-215 CC denotes and
T1745 203-211 NN denotes necrosis
T1744 193-202 VB denotes regulated
T1743 190-192 IN denotes in
T1742 182-189 NN denotes pathway
T1741 178-181 NN denotes Akt
T1740 174-177 DT denotes the
T1739 170-173 IN denotes for
T1738 165-169 NN denotes role
T1737 159-164 JJ denotes novel
T1736 155-158 CC denotes and
T1735 146-154 JJ denotes specific
T1734 144-145 DT denotes a
T1733 137-143 VB denotes reveal
T1732 129-136 NN denotes results
T1731 125-128 PRP-DOLLAR- denotes our
T1730 123-124 -COMMA- denotes ,
T1729 116-123 RB denotes Overall
T1728 112-114 FW denotes se
T1727 108-111 FW denotes per
T1726 102-107 NN denotes death
T1725 97-101 NN denotes cell
T1724 93-96 IN denotes for
T1723 81-92 JJ denotes dispensible
T1722 78-80 VB denotes is
T1721 74-77 CC denotes but
T1720 72-73 -COMMA- denotes ,
T1719 62-72 NN denotes production
T1718 57-61 NN denotes TNFα
T1717 54-56 TO denotes to
T1716 49-53 NN denotes link
T1715 45-48 JJ denotes key
T1714 43-44 DT denotes a
T1713 34-42 VB denotes provides
T1712 30-33 NN denotes Akt
T1711 18-29 NN denotes fibroblasts
T1710 13-17 NN denotes lung
T1709 7-12 NN denotes mouse
T1708 3-6 CC denotes and
T1707 1-2 -COMMA- denotes ,
T3219 270-275 JJ denotes Basic
R1155 T1708 T1707 arg1Of and,","
R1156 T1708 T1713 arg1Of and,provides
R1157 T1712 T1708 arg2Of Akt,and
R1158 T1712 T1709 arg1Of Akt,mouse
R1159 T1712 T1710 arg1Of Akt,lung
R1160 T1712 T1711 arg1Of Akt,fibroblasts
R1165 T1716 T1713 arg2Of link,provides
R1166 T1716 T1714 arg1Of link,a
R1167 T1716 T1715 arg1Of link,key
R1168 T1716 T1717 arg1Of link,to
R1169 T1719 T1717 arg2Of production,to
R1170 T1719 T1718 arg1Of production,TNFα
R1171 T1721 T1720 arg1Of but,","
R1172 T1722 T1721 arg2Of is,but
R1173 T1722 T1728 arg1Of is,se
R1174 T1723 T1722 arg2Of dispensible,is
R1175 T1723 T1724 arg1Of dispensible,for
R1176 T1726 T1724 arg2Of death,for
R1177 T1726 T1725 arg1Of death,cell
R1178 T1728 T1727 arg1Of se,per
R1179 T1732 T1731 arg1Of results,our
R1180 T1732 T1733 arg1Of results,reveal
R1181 T1733 T1729 arg1Of reveal,Overall
R1182 T1733 T1730 arg1Of reveal,","
R1183 T1735 T1736 arg1Of specific,and
R1184 T1737 T1736 arg2Of novel,and
R1185 T1738 T1733 arg2Of role,reveal
R1186 T1738 T1734 arg1Of role,a
R1187 T1738 T1735 arg1Of role,specific
R1188 T1738 T1737 arg1Of role,novel
R1189 T1738 T1739 arg1Of role,for
R1190 T1738 T1743 arg1Of role,in
R1191 T1742 T1739 arg2Of pathway,for
R1192 T1742 T1740 arg1Of pathway,the
R1193 T1742 T1741 arg1Of pathway,Akt
R1194 T1745 T1744 arg2Of necrosis,regulated
R1195 T1745 T1746 arg1Of necrosis,and
R1196 T1746 T1743 arg2Of and,in
R1197 T1749 T1746 arg2Of signaling,and
R1198 T1749 T1747 arg1Of signaling,necrosis-associated
R1199 T1749 T1748 arg1Of signaling,inflammatory
R2033 T3237 T3248 arg1Of undergo,","
R2034 T3237 T3249 arg1Of undergo,[
R2042 T3246 T3245 arg2Of 10,[
R2043 T3247 T3245 arg3Of ],[
R2044 T3250 T3249 arg2Of 17,[
R2045 T3251 T3249 arg3Of ],[
R2046 T3253 T3252 arg2Of addition,In
R2047 T3255 T3256 arg1Of inhibition,of
R2048 T3255 T3274 arg1Of inhibition,is
R2049 T3255 T3275 arg1Of inhibition,sufficient
R2050 T3255 T3277 arg1Of inhibition,trigger
R2051 T3258 T3256 arg2Of activity,of
R2052 T3258 T3257 arg1Of activity,caspase-8
R2053 T3258 T3259 arg1Of activity,alone
R2054 T3262 T3265 arg1Of through,or
R2055 T3264 T3262 arg2Of knockdown,through
R2056 T3264 T3263 arg1Of knockdown,siRNA
R2057 T3265 T3261 arg1Of or,either
R2058 T3266 T3265 arg2Of by,or
R2059 T3267 T3266 arg2Of using,by
R2060 T3270 T3267 arg2Of inhibitor,using
R2061 T3270 T3268 arg1Of inhibitor,the
R2062 T3270 T3269 arg1Of inhibitor,pan-caspase
R2063 T3270 T3271 arg1Of inhibitor,","
R2064 T3272 T3271 arg2Of zVAD.fmk,","
R2065 T3274 T3252 arg1Of is,In
R2066 T3274 T3254 arg1Of is,","
R2067 T3274 T3260 arg1Of is,","
R2068 T3274 T3262 arg1Of is,through
R2069 T3274 T3266 arg1Of is,by
R2070 T3274 T3273 arg1Of is,","
R2071 T3275 T3274 arg2Of sufficient,is
R2072 T3277 T3275 arg2Of trigger,sufficient
R2073 T3277 T3276 arg1Of trigger,to
R2013 T3224 T3219 arg1Of Necroptosis,Basic
R2014 T3224 T3220 arg1Of Necroptosis,Fibroblast
R2015 T3224 T3221 arg1Of Necroptosis,Growth
R2016 T3224 T3222 arg1Of Necroptosis,Factor
R2017 T3224 T3223 arg1Of Necroptosis,Promotes
R2018 T3224 T3225 arg1Of Necroptosis,in
R2019 T3227 T3225 arg2Of Cells,in
R2020 T3227 T3226 arg1Of Cells,L929
R2021 T3228 T3229 arg1Of It,has
R2022 T3228 T3230 arg1Of It,been
R2023 T3228 T3231 arg2Of It,established
R2024 T3231 T3229 arg2Of established,has
R2025 T3231 T3230 arg2Of established,been
R2026 T3236 T3233 arg1Of cells,mouse
R2027 T3236 T3234 arg1Of cells,fibrosarcoma
R2028 T3236 T3235 arg1Of cells,L929
R2029 T3236 T3237 arg1Of cells,undergo
R2030 T3237 T3231 arg3Of undergo,established
R2031 T3237 T3232 arg1Of undergo,that
R2032 T3237 T3241 arg1Of undergo,following
R2035 T3240 T3237 arg2Of death,undergo
R2036 T3240 T3238 arg1Of death,necroptotic
R2037 T3240 T3239 arg1Of death,cell
R2038 T3242 T3241 arg2Of stimulation,following
R2039 T3242 T3243 arg1Of stimulation,with
R2040 T3244 T3243 arg2Of TNFα,with
R2041 T3244 T3245 arg1Of TNFα,[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T950 57-61 Protein denotes TNFα
T3041 497-506 Protein denotes caspase-8
T3040 453-457 Protein denotes TNFα
T3039 270-300 Protein denotes Basic Fibroblast Growth Factor

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3953 453-457 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T1842 178-181 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1841 30-33 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1831 178-181 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1830 30-33 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1820 178-181 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1819 30-33 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1809 57-61 http://www.uniprot.org/uniprot/P01375 denotes TNFα

UBERON-AE

Id Subject Object Predicate Lexical cue
T879 13-17 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung

GO-BP

Id Subject Object Predicate Lexical cue
T3122 420-425 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T3117 415-425 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T3099 310-321 http://purl.obolibrary.org/obo/GO_0097528 denotes Necroptosis
T3079 310-321 http://purl.obolibrary.org/obo/GO_0070266 denotes Necroptosis
T3068 287-293 http://purl.obolibrary.org/obo/GO_0040007 denotes Growth
T1048 193-211 http://purl.obolibrary.org/obo/GO_0097300 denotes regulated necrosis
T1018 249-258 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T1009 216-224 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T1008 203-211 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T1006 216-224 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T1005 203-211 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T1003 216-224 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T1002 203-211 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T1000 102-107 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T995 216-224 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T994 203-211 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis

GO-CC

Id Subject Object Predicate Lexical cue
T3162 389-394 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1064 97-101 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T2973 336-469 Sentence denotes It has been established that mouse fibrosarcoma L929 cells undergo necroptotic cell death following stimulation with TNFα [10], [17].
T2972 270-335 Sentence denotes Basic Fibroblast Growth Factor Promotes Necroptosis in L929 Cells
T901 116-259 Sentence denotes Overall, our results reveal a specific and novel role for the Akt pathway in regulated necrosis and necrosis-associated inflammatory signaling.
T35 116-259 Sentence denotes Overall, our results reveal a specific and novel role for the Akt pathway in regulated necrosis and necrosis-associated inflammatory signaling.
T36 261-268 Sentence denotes Results
T37 270-335 Sentence denotes Basic Fibroblast Growth Factor Promotes Necroptosis in L929 Cells
T38 336-469 Sentence denotes It has been established that mouse fibrosarcoma L929 cells undergo necroptotic cell death following stimulation with TNFα [10], [17].

simple1

Id Subject Object Predicate Lexical cue
T3173 497-506 Protein denotes caspase-8
T3172 453-457 Protein denotes TNFα
T3171 270-300 Protein denotes Basic Fibroblast Growth Factor
T1084 57-61 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3946 483-493 Negative_regulation denotes inhibition
T1768 57-61 Protein denotes TNFα
T3919 497-506 Protein denotes caspase-8
T3918 453-457 Protein denotes TNFα
T3917 270-300 Protein denotes Basic Fibroblast Growth Factor
T1777 62-72 Gene_expression denotes production
R1205 T1768 T1777 themeOf TNFα,production
R2718 T3919 T3946 themeOf caspase-8,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4077 483-493 Negative_regulation denotes inhibition
T4050 497-506 Protein denotes caspase-8
T4049 453-457 Protein denotes TNFα
T4048 270-300 Protein denotes Basic Fibroblast Growth Factor
T2152 62-72 Gene_expression denotes production
T2151 49-53 Positive_regulation denotes link
T2140 57-61 Protein denotes TNFα
R1462 T2140 T2152 themeOf TNFα,production
R1471 T2152 T2151 themeOf production,link
R2745 T4050 T4077 themeOf caspase-8,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T4004 544-553 Negative_regulation denotes knockdown
T4003 483-493 Negative_regulation denotes inhibition
T3976 497-506 Protein denotes caspase-8
T3975 453-457 Protein denotes TNFα
T3974 270-300 Protein denotes Basic Fibroblast Growth Factor
T1901 49-53 Positive_regulation denotes link
T1900 62-72 Gene_expression denotes production
T1887 57-61 Protein denotes TNFα
R2738 T4003 T4004 themeOf inhibition,knockdown
R1222 T1887 T1900 themeOf TNFα,production
R1229 T1900 T1901 themeOf production,link
R2725 T3976 T4003 themeOf caspase-8,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4934 593-602 Entity denotes zVAD.fmk,
T4933 566-592 Protein denotes the pan-caspase inhibitor,
T4918 270-300 Protein denotes Basic Fibroblast Growth Factor
T4985 473-515 Negative_regulation denotes addition, inhibition of caspase-8 activity
T4984 270-301 Localization denotes Basic Fibroblast Growth Factor
T4976 276-286 Entity denotes Fibroblast
T4974 453-468 Protein denotes TNFα [10], [17]
T4964 566-592 Entity denotes the pan-caspase inhibitor,
T4951 497-506 Protein denotes caspase-8
T2797 57-72 Gene_expression denotes TNFα production
T2789 30-33 Protein denotes Akt
T2766 57-61 Protein denotes TNFα
T2761 174-189 Protein denotes the Akt pathway
T2751 7-29 Entity denotes mouse lung fibroblasts
R3458 T4918 T4984 themeOf Basic Fibroblast Growth Factor,Basic Fibroblast Growth Factor
R3492 T4976 T4984 locationOf Fibroblast,Basic Fibroblast Growth Factor
R1971 T2766 T2797 themeOf TNFα,TNFα production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4199 620-627 VB denotes trigger
T4198 617-619 TO denotes to
T4197 606-616 JJ denotes sufficient
T4196 603-605 VBZ denotes is
T4195 601-602 , denotes ,
T4194 593-601 NNP denotes zVAD.fmk
T4193 591-592 , denotes ,
T4192 582-591 NN denotes inhibitor
T4191 570-581 NN denotes pan-caspase
T4190 566-569 DT denotes the
T4189 560-565 VBG denotes using
T4188 557-559 IN denotes by
T4187 554-556 CC denotes or
T4186 544-553 NN denotes knockdown
T4185 538-543 NNP denotes siRNA
T4184 530-537 IN denotes through
T4183 523-529 DT denotes either
T4182 521-522 , denotes ,
T4181 516-521 RB denotes alone
T4180 507-515 NN denotes activity
T4179 497-506 JJ denotes caspase-8
T4178 494-496 IN denotes of
T4177 483-493 NN denotes inhibition
T4176 481-482 , denotes ,
T4175 473-481 NN denotes addition
T4174 470-472 IN denotes In
T4173 468-469 . denotes .
T4172 467-468 NNP denotes ]
T4171 465-467 CD denotes 17
T4170 464-465 NNP denotes [
T4169 462-463 , denotes ,
T4168 461-462 NNP denotes ]
T4167 459-461 CD denotes 10
T4166 458-459 NNP denotes [
T4165 453-457 NNP denotes TNFα
T4164 448-452 IN denotes with
T4163 436-447 NN denotes stimulation
T4162 426-435 VBG denotes following
T4161 420-425 NN denotes death
T4160 415-419 NN denotes cell
T4159 403-414 JJ denotes necroptotic
T4158 395-402 VBP denotes undergo
T4157 389-394 NNS denotes cells
T4156 384-388 NNP denotes L929
T4155 371-383 NN denotes fibrosarcoma
T4154 365-370 NN denotes mouse
T4153 360-364 IN denotes that
T4152 348-359 VBN denotes established
T4151 343-347 VBN denotes been
T4150 339-342 VBZ denotes has
T4149 336-338 PRP denotes It
T4148 330-335 NNP denotes Cells
T4147 325-329 NNP denotes L929
T4146 322-324 IN denotes in
T4145 310-321 NNP denotes Necroptosis
T4144 301-309 NNP denotes Promotes
T4143 294-300 NNP denotes Factor
T4142 287-293 NNP denotes Growth
T4141 276-286 NNP denotes Fibroblast
T4140 270-275 JJ denotes Basic
T2673 258-259 . denotes .
T2672 249-258 VBG denotes signaling
T2671 236-248 JJ denotes inflammatory
T2670 216-235 JJ denotes necrosis-associated
T2669 212-215 CC denotes and
T2668 203-211 NN denotes necrosis
T2667 193-202 JJ denotes regulated
T2666 190-192 IN denotes in
T2665 182-189 NN denotes pathway
T2664 178-181 NNP denotes Akt
T2663 174-177 DT denotes the
T2662 170-173 IN denotes for
T2661 165-169 NN denotes role
T2660 159-164 JJ denotes novel
T2659 155-158 CC denotes and
T2658 146-154 JJ denotes specific
T2657 144-145 DT denotes a
T2656 137-143 VBP denotes reveal
T2655 129-136 NNS denotes results
T2654 125-128 PRP$ denotes our
T2653 123-124 , denotes ,
T2652 116-123 RB denotes Overall
T2651 114-115 . denotes .
T2650 112-114 FW denotes se
T2649 108-111 IN denotes per
T2648 102-107 NN denotes death
T2647 97-101 NN denotes cell
T2646 93-96 IN denotes for
T2645 81-92 JJ denotes dispensible
T2644 78-80 VBZ denotes is
T2643 74-77 CC denotes but
T2642 72-73 , denotes ,
T2641 62-72 NN denotes production
T2640 57-61 VB denotes TNFα
T2639 54-56 TO denotes to
T2638 49-53 NN denotes link
T2637 45-48 JJ denotes key
T2636 43-44 DT denotes a
T2635 34-42 VBZ denotes provides
T2634 30-33 NNP denotes Akt
T2633 18-29 NNS denotes fibroblasts
T2632 13-17 NN denotes lung
T2631 7-12 NN denotes mouse
T2630 3-6 CC denotes and
T2629 1-2 , denotes ,
R1916 T2631 T2632 compound mouse,lung
R1917 T2632 T2633 compound lung,fibroblasts
R1921 T2634 T2635 nsubj Akt,provides
R1927 T2636 T2638 det a,link
R1929 T2637 T2638 amod key,link
R1930 T2638 T2635 dobj link,provides
R1932 T2639 T2640 aux to,TNFα
R1933 T2640 T2638 relcl TNFα,link
R1934 T2641 T2640 dobj production,TNFα
R1943 T2645 T2644 acomp dispensible,is
R1944 T2646 T2645 prep for,dispensible
R1945 T2647 T2648 compound cell,death
R1946 T2648 T2646 pobj death,for
R1947 T2649 T2648 prep per,death
R1948 T2650 T2649 pobj se,per
R1950 T2652 T2656 advmod Overall,reveal
R1951 T2653 T2656 punct ",",reveal
R1952 T2654 T2655 poss our,results
R1954 T2655 T2656 nsubj results,reveal
R1956 T2656 T2656 ROOT reveal,reveal
R1957 T2657 T2661 det a,role
R1958 T2658 T2661 amod specific,role
R1960 T2659 T2658 cc and,specific
R1961 T2660 T2658 conj novel,specific
R1963 T2661 T2656 dobj role,reveal
R1965 T2662 T2661 prep for,role
R1966 T2663 T2665 det the,pathway
R1967 T2664 T2665 compound Akt,pathway
R1968 T2665 T2662 pobj pathway,for
R1970 T2666 T2665 prep in,pathway
R1972 T2667 T2668 amod regulated,necrosis
R1974 T2668 T2666 pobj necrosis,in
R1975 T2669 T2668 cc and,necrosis
R1977 T2670 T2672 amod necrosis-associated,signaling
R1979 T2671 T2672 amod inflammatory,signaling
R1980 T2672 T2656 advcl signaling,reveal
R1981 T2673 T2656 punct .,reveal
R2760 T4140 T4143 compound Basic,Factor
R2761 T4141 T4143 compound Fibroblast,Factor
R2762 T4142 T4143 compound Growth,Factor
R2763 T4143 T4145 compound Factor,Necroptosis
R2764 T4144 T4145 compound Promotes,Necroptosis
R2765 T4145 T4145 ROOT Necroptosis,Necroptosis
R2766 T4146 T4145 prep in,Necroptosis
R2767 T4147 T4148 compound L929,Cells
R2768 T4148 T4146 pobj Cells,in
R2769 T4149 T4152 nsubjpass It,established
R2770 T4150 T4152 aux has,established
R2771 T4151 T4152 auxpass been,established
R2772 T4152 T4152 ROOT established,established
R2773 T4153 T4158 mark that,undergo
R2774 T4154 T4157 compound mouse,cells
R2775 T4155 T4156 compound fibrosarcoma,L929
R2776 T4156 T4157 compound L929,cells
R2777 T4157 T4158 nsubj cells,undergo
R2778 T4158 T4152 ccomp undergo,established
R2779 T4159 T4163 amod necroptotic,stimulation
R2780 T4160 T4161 compound cell,death
R2781 T4161 T4162 npadvmod death,following
R2782 T4162 T4163 amod following,stimulation
R2783 T4163 T4158 dobj stimulation,undergo
R2784 T4164 T4158 prep with,undergo
R2785 T4165 T4166 compound TNFα,[
R2786 T4166 T4164 pobj [,with
R2787 T4167 T4168 nummod 10,]
R2788 T4168 T4166 conj ],[
R2789 T4169 T4168 punct ",",]
R2790 T4170 T4172 nmod [,]
R2791 T4171 T4172 nummod 17,]
R2792 T4172 T4168 conj ],]
R2793 T4173 T4152 punct .,established
R2794 T4174 T4196 prep In,is
R2795 T4175 T4174 pobj addition,In
R2796 T4176 T4196 punct ",",is
R2797 T4177 T4196 nsubj inhibition,is
R2798 T4178 T4177 prep of,inhibition
R2799 T4179 T4180 amod caspase-8,activity
R2800 T4180 T4178 pobj activity,of
R2801 T4181 T4180 advmod alone,activity
R2802 T4182 T4196 punct ",",is
R2803 T4183 T4196 advcl either,is
R2804 T4184 T4183 prep through,either
R2805 T4185 T4186 compound siRNA,knockdown
R2806 T4186 T4184 pobj knockdown,through
R2807 T4187 T4184 cc or,through
R2808 T4188 T4184 conj by,through
R2809 T4189 T4188 pcomp using,by
R2810 T4190 T4192 det the,inhibitor
R2811 T4191 T4192 compound pan-caspase,inhibitor
R2812 T4192 T4189 dobj inhibitor,using
R2813 T4193 T4196 punct ",",is
R2814 T4194 T4196 nsubj zVAD.fmk,is
R2815 T4195 T4196 punct ",",is
R2816 T4196 T4196 ROOT is,is
R2817 T4197 T4196 acomp sufficient,is
R2818 T4198 T4199 aux to,trigger
R2819 T4199 T4197 xcomp trigger,sufficient

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4086 593-601 Protein denotes zVAD.fmk
T4085 574-581 Protein denotes caspase
T4084 497-504 Protein denotes caspase
T4083 453-462 Protein denotes TNFα [10]
T2205 178-181 Protein denotes Akt
T2204 62-72 Gene_expression denotes production
T2203 57-61 Protein denotes TNFα
R1488 T2203 T2204 themeOf TNFα,production

test3

Id Subject Object Predicate Lexical cue
T2896 497-506 Protein denotes caspase-8
T2895 453-457 Protein denotes TNFα
T2894 270-300 Protein denotes Basic Fibroblast Growth Factor
T2926 497-506 Protein denotes caspase-8
T2925 453-457 Protein denotes TNFα
T2924 426-435 Positive_regulation denotes following
T2923 270-300 Protein denotes Basic Fibroblast Growth Factor
T874 62-72 Gene_expression denotes production
T873 57-61 Protein denotes TNFα
T844 57-61 Protein denotes TNFα
R512 T873 T874 themeOf TNFα,production