PMC:3320587 / 33474-34520
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25483 | 1021-1040 | NN | denotes | d to HIV-1Lai/Bal-E |
T25482 | 1019-1021 | TO | denotes | re |
T25481 | 1011-1019 | VB | denotes | as compa |
T25480 | 1008-1010 | IN | denotes | 1, |
T25479 | 1007-1008 | -COMMA- | denotes | 0 |
T25478 | 1003-1007 | CD | denotes | p<0. |
T25477 | 1001-1002 | SYM | denotes | , |
T25476 | 1000-1001 | NN | denotes | * |
T25475 | 999-1000 | -COMMA- | denotes | * |
T25474 | 997-999 | SYM | denotes | ; |
T25473 | 996-997 | -COLON- | denotes | 5 |
T25472 | 992-996 | CD | denotes | <0.0 |
T25471 | 991-992 | SYM | denotes | p |
T25470 | 989-990 | NN | denotes | , |
T25469 | 988-989 | -COMMA- | denotes | * |
T25468 | 986-987 | SYM | denotes | . |
T25467 | 985-986 | -RRB- | denotes | ) |
T25466 | 973-985 | RB | denotes | respectively |
T25465 | 971-972 | -COMMA- | denotes | , |
T25464 | 959-971 | NN | denotes | co-infection |
T25463 | 955-958 | NN | denotes | MTb |
T25462 | 950-954 | IN | denotes | with |
T25461 | 946-949 | CC | denotes | and |
T25441 | 805-809 | NN | denotes | PBMC |
T25440 | 803-804 | -RRB- | denotes | ) |
T25439 | 799-803 | NN | denotes | bars |
T25438 | 793-798 | JJ | denotes | black |
T25437 | 792-793 | -LRB- | denotes | ( |
T25436 | 780-791 | JJ | denotes | co-infected |
T25435 | 776-779 | NN | denotes | MTb |
T25434 | 772-775 | CC | denotes | and |
T25433 | 770-771 | -RRB- | denotes | ) |
T25432 | 766-770 | NN | denotes | bars |
T25431 | 761-765 | JJ | denotes | grey |
T25430 | 760-761 | -LRB- | denotes | ( |
T25429 | 749-759 | JJ | denotes | uninfected |
T25428 | 745-748 | NN | denotes | MTb |
T25427 | 741-744 | DT | denotes | the |
T25426 | 738-740 | IN | denotes | in |
T25425 | 735-737 | CD | denotes | 12 |
T25424 | 731-734 | NN | denotes | day |
T25423 | 728-730 | IN | denotes | at |
T25422 | 721-727 | NN | denotes | levels |
T25421 | 717-720 | NN | denotes | p24 |
T25420 | 711-716 | JJ | denotes | viral |
T25419 | 706-710 | VB | denotes | show |
T25418 | 695-705 | NN | denotes | Histograms |
T25417 | 693-694 | -RRB- | denotes | ) |
T25416 | 692-693 | NN | denotes | C |
T25415 | 691-692 | -LRB- | denotes | ( |
T25414 | 675-690 | JJ | denotes | post-infection. |
T25413 | 672-674 | CD | denotes | 12 |
T25412 | 668-671 | CC | denotes | and |
T25411 | 666-667 | CD | denotes | 7 |
T25410 | 664-665 | -COMMA- | denotes | , |
T25409 | 663-664 | CD | denotes | 4 |
T25408 | 658-662 | NN | denotes | days |
T25407 | 655-657 | IN | denotes | at |
T25406 | 646-654 | VB | denotes | measured |
T25405 | 641-645 | VB | denotes | were |
T25404 | 628-640 | NN | denotes | supernatants |
T25403 | 620-627 | NN | denotes | culture |
T25402 | 617-619 | IN | denotes | in |
T25401 | 610-616 | NN | denotes | levels |
T25400 | 606-609 | NN | denotes | p24 |
T25399 | 600-605 | JJ | denotes | Viral |
T25398 | 597-598 | -RRB- | denotes | ) |
T25397 | 584-597 | NN | denotes | cells∶bacilli |
T25396 | 579-583 | CD | denotes | 10∶1 |
T25395 | 578-579 | -LRB- | denotes | ( |
T25394 | 570-577 | NN | denotes | CDC1551 |
T25393 | 562-569 | NN | denotes | isolate |
T25392 | 558-561 | NN | denotes | MTb |
T25391 | 553-557 | IN | denotes | with |
T25390 | 541-552 | JJ | denotes | co-infected |
T25389 | 539-540 | -RRB- | denotes | ) |
T25388 | 538-539 | NN | denotes | B |
T25387 | 537-538 | -LRB- | denotes | ( |
T25386 | 534-536 | CC | denotes | or |
T25385 | 532-533 | -COMMA- | denotes | , |
T25384 | 523-532 | JJ | denotes | untreated |
T25383 | 518-522 | VB | denotes | left |
T25382 | 516-517 | -RRB- | denotes | ) |
T25381 | 515-516 | NN | denotes | A |
T25380 | 514-515 | -LRB- | denotes | ( |
T25379 | 512-513 | -COLON- | denotes | ; |
T25378 | 506-512 | CC | denotes | either |
T25377 | 502-505 | CC | denotes | and |
T25376 | 478-501 | NN | denotes | HIV-1Lai/Bal-env-N5-Mut |
T25375 | 475-477 | CC | denotes | or |
T25374 | 473-474 | -COMMA- | denotes | , |
T25373 | 465-473 | NN | denotes | I+II-Mut |
T25372 | 445-464 | NN | denotes | HIV-1Lai/Bal-env-κB |
T25371 | 443-444 | -COMMA- | denotes | , |
T25370 | 437-443 | NN | denotes | II-Mut |
T25369 | 417-436 | NN | denotes | HIV-1Lai/Bal-env-κB |
T25368 | 415-416 | -COMMA- | denotes | , |
T25367 | 410-415 | NN | denotes | I-Mut |
T25366 | 390-409 | NN | denotes | HIV-1Lai/Bal-env-κB |
T25365 | 382-389 | NN | denotes | mutants |
T25364 | 378-381 | DT | denotes | the |
T25363 | 375-377 | CC | denotes | or |
T25362 | 355-374 | NN | denotes | HIV-1Lai/Bal-env-WT |
T25361 | 348-354 | NN | denotes | TCID50 |
T25360 | 343-347 | CD | denotes | 1000 |
T25359 | 338-342 | IN | denotes | with |
T25358 | 329-337 | VB | denotes | infected |
T25357 | 324-328 | VB | denotes | were |
T25356 | 317-323 | NN | denotes | donors |
T25355 | 310-316 | JJ | denotes | normal |
T25354 | 305-309 | CD | denotes | four |
T25353 | 300-304 | IN | denotes | from |
T25352 | 295-299 | NN | denotes | PBMC |
T25351 | 290-293 | NN | denotes | MTb |
T25350 | 285-289 | IN | denotes | with |
T25349 | 272-284 | NN | denotes | co-infection |
T25348 | 266-271 | IN | denotes | after |
T25347 | 261-265 | NN | denotes | PBMC |
T25346 | 255-260 | JJ | denotes | human |
T25345 | 252-254 | IN | denotes | in |
T25344 | 240-251 | NN | denotes | replication |
T25343 | 234-239 | NN | denotes | virus |
T25342 | 224-233 | JJ | denotes | R5-tropic |
T25341 | 215-223 | VB | denotes | inhibits |
T25340 | 211-214 | NN | denotes | LTR |
T25339 | 209-210 | NN | denotes | B |
T25338 | 201-208 | NN | denotes | subtype |
T25337 | 195-200 | NN | denotes | HIV-1 |
T25336 | 191-194 | DT | denotes | the |
T25335 | 188-190 | IN | denotes | in |
T25334 | 182-187 | NN | denotes | sites |
T25333 | 174-181 | NN | denotes | binding |
T25332 | 168-173 | NN | denotes | NFAT5 |
T25331 | 165-167 | CC | denotes | or |
T25330 | 159-164 | NN | denotes | NF-κB |
T25329 | 155-158 | DT | denotes | the |
T25328 | 152-154 | IN | denotes | of |
T25327 | 141-151 | NN | denotes | disruption |
T25326 | 132-140 | JJ | denotes | Specific |
T25325 | 127-130 | NN | denotes | LTR |
T25324 | 123-126 | DT | denotes | the |
T25323 | 120-122 | TO | denotes | to |
T25322 | 114-119 | NN | denotes | NF-κB |
T25321 | 110-113 | CC | denotes | and |
T25320 | 104-109 | NN | denotes | NFAT5 |
T25319 | 101-103 | IN | denotes | of |
T25318 | 93-100 | NN | denotes | binding |
T25317 | 90-92 | IN | denotes | on |
T25316 | 82-89 | VB | denotes | depends |
T25315 | 77-81 | NN | denotes | PBMC |
T25314 | 74-76 | IN | denotes | in |
T25313 | 62-73 | NN | denotes | replication |
T25312 | 56-61 | NN | denotes | HIV-1 |
T25311 | 44-55 | JJ | denotes | MTb-induced |
T25460 | 938-945 | IN | denotes | without |
T25459 | 937-938 | -LRB- | denotes | ( |
T25458 | 926-936 | NN | denotes | conditions |
T25457 | 913-925 | JJ | denotes | experimental |
T25456 | 908-912 | JJ | denotes | same |
T25455 | 904-907 | DT | denotes | the |
T25454 | 898-903 | IN | denotes | under |
T25453 | 886-897 | NN | denotes | replication |
T25452 | 880-885 | NN | denotes | virus |
T25451 | 870-879 | JJ | denotes | wild-type |
T25450 | 867-869 | TO | denotes | to |
T25449 | 858-866 | VB | denotes | compared |
T25448 | 854-857 | VB | denotes | was |
T25447 | 846-853 | NN | denotes | viruses |
T25446 | 839-845 | JJ | denotes | mutant |
T25445 | 835-838 | DT | denotes | the |
T25444 | 832-834 | IN | denotes | of |
T25443 | 820-831 | NN | denotes | Replication |
T25442 | 810-818 | NN | denotes | cultures |
R18449 | T25313 | T25311 | arg1Of | replication,MTb-induced |
R18450 | T25313 | T25312 | arg1Of | replication,HIV-1 |
R18451 | T25313 | T25314 | arg1Of | replication,in |
R18452 | T25313 | T25316 | arg1Of | replication,depends |
R18453 | T25315 | T25314 | arg2Of | PBMC,in |
R18454 | T25316 | T25317 | arg1Of | depends,on |
R18455 | T25318 | T25317 | arg2Of | binding,on |
R18456 | T25318 | T25319 | arg1Of | binding,of |
R18457 | T25318 | T25323 | arg1Of | binding,to |
R18458 | T25320 | T25321 | arg1Of | NFAT5,and |
R18459 | T25321 | T25319 | arg2Of | and,of |
R18460 | T25322 | T25321 | arg2Of | NF-κB,and |
R18461 | T25325 | T25323 | arg2Of | LTR,to |
R18462 | T25325 | T25324 | arg1Of | LTR,the |
R18463 | T25327 | T25326 | arg1Of | disruption,Specific |
R18464 | T25327 | T25328 | arg1Of | disruption,of |
R18465 | T25327 | T25335 | arg1Of | disruption,in |
R18466 | T25327 | T25341 | arg1Of | disruption,inhibits |
R18467 | T25330 | T25331 | arg1Of | NF-κB,or |
R18468 | T25332 | T25331 | arg2Of | NFAT5,or |
R18469 | T25334 | T25328 | arg2Of | sites,of |
R18470 | T25334 | T25329 | arg1Of | sites,the |
R18471 | T25334 | T25330 | arg1Of | sites,NF-κB |
R18472 | T25334 | T25332 | arg1Of | sites,NFAT5 |
R18473 | T25334 | T25333 | arg1Of | sites,binding |
R18474 | T25340 | T25335 | arg2Of | LTR,in |
R18475 | T25340 | T25336 | arg1Of | LTR,the |
R18476 | T25340 | T25337 | arg1Of | LTR,HIV-1 |
R18477 | T25340 | T25338 | arg1Of | LTR,subtype |
R18478 | T25340 | T25339 | arg1Of | LTR,B |
R18479 | T25341 | T25348 | arg1Of | inhibits,after |
R18480 | T25344 | T25341 | arg2Of | replication,inhibits |
R18481 | T25344 | T25342 | arg1Of | replication,R5-tropic |
R18482 | T25344 | T25343 | arg1Of | replication,virus |
R18483 | T25344 | T25345 | arg1Of | replication,in |
R18484 | T25347 | T25345 | arg2Of | PBMC,in |
R18485 | T25347 | T25346 | arg1Of | PBMC,human |
R18486 | T25349 | T25348 | arg2Of | co-infection,after |
R18487 | T25349 | T25350 | arg1Of | co-infection,with |
R18488 | T25351 | T25350 | arg2Of | MTb,with |
R18489 | T25352 | T25353 | arg1Of | PBMC,from |
R18490 | T25352 | T25357 | arg1Of | PBMC,were |
R18491 | T25352 | T25358 | arg2Of | PBMC,infected |
R18492 | T25356 | T25353 | arg2Of | donors,from |
R18493 | T25356 | T25354 | arg1Of | donors,four |
R18494 | T25356 | T25355 | arg1Of | donors,normal |
R18495 | T25358 | T25357 | arg2Of | infected,were |
R18496 | T25358 | T25359 | arg1Of | infected,with |
R18497 | T25358 | T25377 | arg1Of | infected,and |
R18498 | T25362 | T25360 | arg1Of | HIV-1Lai/Bal-env-WT,1000 |
R18499 | T25362 | T25361 | arg1Of | HIV-1Lai/Bal-env-WT,TCID50 |
R18500 | T25362 | T25363 | arg1Of | HIV-1Lai/Bal-env-WT,or |
R18501 | T25363 | T25368 | arg1Of | or,"," |
R18502 | T25365 | T25364 | arg1Of | mutants,the |
R18503 | T25367 | T25363 | arg2Of | I-Mut,or |
R18504 | T25367 | T25365 | arg1Of | I-Mut,mutants |
R18505 | T25367 | T25366 | arg1Of | I-Mut,HIV-1Lai/Bal-env-κB |
R18506 | T25368 | T25371 | arg1Of | ",","," |
R18507 | T25370 | T25368 | arg2Of | II-Mut,"," |
R18508 | T25370 | T25369 | arg1Of | II-Mut,HIV-1Lai/Bal-env-κB |
R18509 | T25371 | T25375 | arg1Of | ",",or |
R18510 | T25373 | T25371 | arg2Of | I+II-Mut,"," |
R18511 | T25373 | T25372 | arg1Of | I+II-Mut,HIV-1Lai/Bal-env-κB |
R18512 | T25375 | T25359 | arg2Of | or,with |
R18513 | T25375 | T25374 | arg1Of | or,"," |
R18514 | T25376 | T25375 | arg2Of | HIV-1Lai/Bal-env-N5-Mut,or |
R18515 | T25381 | T25380 | arg2Of | A,( |
R18516 | T25381 | T25383 | arg1Of | A,left |
R18517 | T25381 | T25390 | arg1Of | A,co-infected |
R18518 | T25382 | T25380 | arg3Of | ),( |
R18519 | T25383 | T25377 | arg2Of | left,and |
R18520 | T25383 | T25378 | arg1Of | left,either |
R18521 | T25383 | T25379 | arg1Of | left,; |
R18522 | T25383 | T25390 | modOf | left,co-infected |
R18523 | T25384 | T25386 | arg1Of | untreated,or |
R18524 | T25386 | T25385 | arg1Of | or,"," |
R18525 | T25388 | T25383 | arg2Of | B,left |
R18526 | T25388 | T25384 | arg1Of | B,untreated |
R18527 | T25388 | T25387 | arg2Of | B,( |
R18528 | T25389 | T25387 | arg3Of | ),( |
R18529 | T25390 | T25391 | arg1Of | co-infected,with |
R18530 | T25394 | T25391 | arg2Of | CDC1551,with |
R18531 | T25394 | T25392 | arg1Of | CDC1551,MTb |
R18532 | T25394 | T25393 | arg1Of | CDC1551,isolate |
R18533 | T25394 | T25395 | arg1Of | CDC1551,( |
R18534 | T25397 | T25395 | arg2Of | cells∶bacilli,( |
R18535 | T25397 | T25396 | arg1Of | cells∶bacilli,10∶1 |
R18536 | T25398 | T25395 | arg3Of | ),( |
R18537 | T25401 | T25399 | arg1Of | levels,Viral |
R18538 | T25401 | T25400 | arg1Of | levels,p24 |
R18539 | T25401 | T25402 | arg1Of | levels,in |
R18540 | T25401 | T25405 | arg1Of | levels,were |
R18541 | T25401 | T25406 | arg2Of | levels,measured |
R18542 | T25404 | T25402 | arg2Of | supernatants,in |
R18543 | T25404 | T25403 | arg1Of | supernatants,culture |
R18544 | T25406 | T25405 | arg2Of | measured,were |
R18545 | T25406 | T25407 | arg1Of | measured,at |
R18546 | T25406 | T25410 | arg1Of | measured,"," |
R18547 | T25409 | T25407 | arg2Of | 4,at |
R18548 | T25409 | T25408 | arg1Of | 4,days |
R18549 | T25411 | T25412 | arg1Of | 7,and |
R18550 | T25413 | T25412 | arg2Of | 12,and |
R18551 | T25416 | T25415 | arg2Of | C,( |
R18552 | T25417 | T25415 | arg3Of | ),( |
R18553 | T25418 | T25411 | arg1Of | Histograms,7 |
R18554 | T25418 | T25413 | arg1Of | Histograms,12 |
R18555 | T25418 | T25414 | arg1Of | Histograms,post-infection. |
R18556 | T25418 | T25415 | arg1Of | Histograms,( |
R18557 | T25418 | T25419 | arg1Of | Histograms,show |
R18558 | T25419 | T25410 | arg2Of | show,"," |
R18559 | T25419 | T25423 | arg1Of | show,at |
R18560 | T25419 | T25426 | arg1Of | show,in |
R18561 | T25422 | T25419 | arg2Of | levels,show |
R18562 | T25422 | T25420 | arg1Of | levels,viral |
R18563 | T25422 | T25421 | arg1Of | levels,p24 |
R18564 | T25424 | T25423 | arg2Of | day,at |
R18565 | T25424 | T25425 | arg1Of | day,12 |
R18566 | T25429 | T25428 | arg1Of | uninfected,MTb |
R18567 | T25432 | T25427 | arg1Of | bars,the |
R18568 | T25432 | T25429 | arg1Of | bars,uninfected |
R18569 | T25432 | T25430 | arg2Of | bars,( |
R18570 | T25432 | T25431 | arg1Of | bars,grey |
R18571 | T25432 | T25434 | arg1Of | bars,and |
R18572 | T25433 | T25430 | arg3Of | ),( |
R18573 | T25434 | T25426 | arg2Of | and,in |
R18574 | T25436 | T25437 | arg1Of | co-infected,( |
R18575 | T25439 | T25437 | arg2Of | bars,( |
R18576 | T25439 | T25438 | arg1Of | bars,black |
R18577 | T25440 | T25437 | arg3Of | ),( |
R18578 | T25442 | T25434 | arg2Of | cultures,and |
R18579 | T25442 | T25435 | arg1Of | cultures,MTb |
R18580 | T25442 | T25436 | arg1Of | cultures,co-infected |
R18581 | T25442 | T25441 | arg1Of | cultures,PBMC |
R18582 | T25443 | T25444 | arg1Of | Replication,of |
R18583 | T25443 | T25448 | arg1Of | Replication,was |
R18584 | T25443 | T25449 | arg2Of | Replication,compared |
R18585 | T25447 | T25444 | arg2Of | viruses,of |
R18586 | T25447 | T25445 | arg1Of | viruses,the |
R18587 | T25447 | T25446 | arg1Of | viruses,mutant |
R18588 | T25449 | T25448 | arg2Of | compared,was |
R18589 | T25449 | T25450 | arg1Of | compared,to |
R18590 | T25449 | T25454 | arg1Of | compared,under |
R18591 | T25449 | T25472 | arg1Of | compared,<0.0 |
R18592 | T25449 | T25479 | arg1Of | compared,0 |
R18593 | T25449 | T25480 | arg1Of | compared,"1," |
R18594 | T25453 | T25450 | arg2Of | replication,to |
R18595 | T25453 | T25451 | arg1Of | replication,wild-type |
R18596 | T25453 | T25452 | arg1Of | replication,virus |
R18597 | T25458 | T25454 | arg2Of | conditions,under |
R18598 | T25458 | T25455 | arg1Of | conditions,the |
R18599 | T25458 | T25456 | arg1Of | conditions,same |
R18600 | T25458 | T25457 | arg1Of | conditions,experimental |
R18601 | T25458 | T25459 | arg1Of | conditions,( |
R18602 | T25458 | T25468 | arg1Of | conditions,. |
R18603 | T25458 | T25469 | arg1Of | conditions,* |
R18604 | T25460 | T25461 | arg1Of | without,and |
R18605 | T25461 | T25459 | arg2Of | and,( |
R18606 | T25462 | T25461 | arg2Of | with,and |
R18607 | T25464 | T25460 | arg2Of | co-infection,without |
R18608 | T25464 | T25462 | arg2Of | co-infection,with |
R18609 | T25464 | T25463 | arg1Of | co-infection,MTb |
R18610 | T25464 | T25465 | arg1Of | co-infection,"," |
R18611 | T25464 | T25466 | arg1Of | co-infection,respectively |
R18612 | T25467 | T25459 | arg3Of | ),( |
R18613 | T25470 | T25469 | arg2Of | ",",* |
R18614 | T25470 | T25471 | arg1Of | ",",p |
R18615 | T25472 | T25473 | arg1Of | <0.0,5 |
R18616 | T25474 | T25475 | arg1Of | ; ,* |
R18617 | T25476 | T25475 | arg2Of | *,* |
R18618 | T25476 | T25477 | arg1Of | *,"," |
R18619 | T25478 | T25473 | arg2Of | p<0.,5 |
R18620 | T25478 | T25474 | arg1Of | p<0.,; |
R18621 | T25481 | T25480 | arg2Of | as compa,"1," |
R18622 | T25481 | T25482 | arg1Of | as compa,re |
R18623 | T25483 | T25482 | arg2Of | d to HIV-1Lai/Bal-E,re |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25286 | 368-371 | Protein | denotes | env |
T25285 | 104-109 | Protein | denotes | NFAT5 |
T25292 | 717-720 | Protein | denotes | p24 |
T25291 | 606-609 | Protein | denotes | p24 |
T25290 | 491-494 | Protein | denotes | env |
T25289 | 458-461 | Protein | denotes | env |
T25288 | 430-433 | Protein | denotes | env |
T25287 | 403-406 | Protein | denotes | env |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25498 | 717-720 | http://www.uniprot.org/uniprot/P03366 | denotes | p24 |
T25497 | 606-609 | http://www.uniprot.org/uniprot/P03366 | denotes | p24 |
T25496 | 717-720 | http://www.uniprot.org/uniprot/P04585 | denotes | p24 |
T25495 | 606-609 | http://www.uniprot.org/uniprot/P04585 | denotes | p24 |
T25494 | 717-720 | http://www.uniprot.org/uniprot/P12497 | denotes | p24 |
T25493 | 606-609 | http://www.uniprot.org/uniprot/P12497 | denotes | p24 |
T25492 | 717-720 | http://www.uniprot.org/uniprot/P04591 | denotes | p24 |
T25491 | 606-609 | http://www.uniprot.org/uniprot/P04591 | denotes | p24 |
T25490 | 491-494 | http://www.uniprot.org/uniprot/P04578 | denotes | env |
T25489 | 458-461 | http://www.uniprot.org/uniprot/P04578 | denotes | env |
T25488 | 430-433 | http://www.uniprot.org/uniprot/P04578 | denotes | env |
T25487 | 403-406 | http://www.uniprot.org/uniprot/P04578 | denotes | env |
T25486 | 368-371 | http://www.uniprot.org/uniprot/P04578 | denotes | env |
T25485 | 168-173 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
T25484 | 104-109 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25294 | 174-181 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T25293 | 93-100 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25275 | 820-1046 | Sentence | denotes | Replication of the mutant viruses was compared to wild-type virus replication under the same experimental conditions (without and with MTb co-infection, respectively). *, p<0.05; **, p<0.01, as compared to HIV-1Lai/Bal-Env-WT. |
T25274 | 600-819 | Sentence | denotes | Viral p24 levels in culture supernatants were measured at days 4, 7 and 12 post-infection. (C) Histograms show viral p24 levels at day 12 in the MTb uninfected (grey bars) and MTb co-infected (black bars) PBMC cultures. |
T25273 | 295-599 | Sentence | denotes | PBMC from four normal donors were infected with 1000 TCID50 HIV-1Lai/Bal-env-WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut and either; (A) left untreated, or (B) co-infected with MTb isolate CDC1551 (10∶1 cells∶bacilli). |
T25272 | 132-294 | Sentence | denotes | Specific disruption of the NF-κB or NFAT5 binding sites in the HIV-1 subtype B LTR inhibits R5-tropic virus replication in human PBMC after co-infection with MTb. |
T25271 | 44-131 | Sentence | denotes | MTb-induced HIV-1 replication in PBMC depends on binding of NFAT5 and NF-κB to the LTR. |
T197 | 0-131 | Sentence | denotes | 10.1371/journal.ppat.1002620.g004 Figure 4 MTb-induced HIV-1 replication in PBMC depends on binding of NFAT5 and NF-κB to the LTR. |
T198 | 132-294 | Sentence | denotes | Specific disruption of the NF-κB or NFAT5 binding sites in the HIV-1 subtype B LTR inhibits R5-tropic virus replication in human PBMC after co-infection with MTb. |
T199 | 295-599 | Sentence | denotes | PBMC from four normal donors were infected with 1000 TCID50 HIV-1Lai/Bal-env-WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut and either; (A) left untreated, or (B) co-infected with MTb isolate CDC1551 (10∶1 cells∶bacilli). |
T200 | 600-819 | Sentence | denotes | Viral p24 levels in culture supernatants were measured at days 4, 7 and 12 post-infection. (C) Histograms show viral p24 levels at day 12 in the MTb uninfected (grey bars) and MTb co-infected (black bars) PBMC cultures. |
T201 | 820-1046 | Sentence | denotes | Replication of the mutant viruses was compared to wild-type virus replication under the same experimental conditions (without and with MTb co-infection, respectively). *, p<0.05; **, p<0.01, as compared to HIV-1Lai/Bal-Env-WT. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25310 | 717-720 | Protein | denotes | p24 |
T25309 | 606-609 | Protein | denotes | p24 |
T25308 | 491-494 | Protein | denotes | env |
T25307 | 458-461 | Protein | denotes | env |
T25306 | 430-433 | Protein | denotes | env |
T25305 | 403-406 | Protein | denotes | env |
T25304 | 368-371 | Protein | denotes | env |
T25303 | 104-109 | Protein | denotes | NFAT5 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25790 | 93-100 | Binding | denotes | binding |
T25789 | 717-720 | Protein | denotes | p24 |
T25788 | 606-609 | Protein | denotes | p24 |
T25787 | 491-494 | Protein | denotes | env |
T25786 | 458-461 | Protein | denotes | env |
T25785 | 430-433 | Protein | denotes | env |
T25784 | 403-406 | Protein | denotes | env |
T25783 | 368-371 | Protein | denotes | env |
T25782 | 104-109 | Protein | denotes | NFAT5 |
R18837 | T25782 | T25790 | themeOf | NFAT5,binding |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25518 | 82-89 | Positive_regulation | denotes | depends |
T25517 | 93-100 | Binding | denotes | binding |
T25516 | 717-720 | Protein | denotes | p24 |
T25515 | 606-609 | Protein | denotes | p24 |
T25514 | 491-494 | Protein | denotes | env |
T25513 | 458-461 | Protein | denotes | env |
T25512 | 430-433 | Protein | denotes | env |
T25511 | 403-406 | Protein | denotes | env |
T25510 | 368-371 | Protein | denotes | env |
T25509 | 104-109 | Protein | denotes | NFAT5 |
R18626 | T25509 | T25517 | themeOf | NFAT5,binding |
R18627 | T25517 | T25518 | themeOf | binding,depends |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25508 | 82-89 | Positive_regulation | denotes | depends |
T25507 | 93-100 | Binding | denotes | binding |
T25506 | 717-720 | Protein | denotes | p24 |
T25505 | 606-609 | Protein | denotes | p24 |
T25504 | 491-494 | Protein | denotes | env |
T25503 | 458-461 | Protein | denotes | env |
T25502 | 430-433 | Protein | denotes | env |
T25501 | 403-406 | Protein | denotes | env |
T25500 | 368-371 | Protein | denotes | env |
T25499 | 104-109 | Protein | denotes | NFAT5 |
R18624 | T25499 | T25507 | themeOf | NFAT5,binding |
R18625 | T25507 | T25508 | themeOf | binding,depends |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25814 | 955-972 | Regulation | denotes | MTb co-infection, |
T25813 | 776-804 | Regulation | denotes | MTb co-infected (black bars) |
T25812 | 152-187 | Binding | denotes | of the NF-κB or NFAT5 binding sites |
T25811 | 90-119 | Binding | denotes | on binding of NFAT5 and NF-κB |
T25810 | 606-609 | Protein | denotes | p24 |
T25809 | 558-561 | Protein | denotes | MTb |
T25808 | 255-265 | Entity | denotes | human PBMC |
T25807 | 620-640 | Entity | denotes | culture supernatants |
T25806 | 159-164 | Protein | denotes | NF-κB |
T25805 | 991-993 | Entity | denotes | p< |
T25804 | 104-109 | Protein | denotes | NFAT5 |
T25803 | 77-81 | Entity | denotes | PBMC |
T25802 | 955-958 | Protein | denotes | MTb |
T25801 | 440-443 | Protein | denotes | Mut |
T25800 | 805-809 | Entity | denotes | PBMC |
T25799 | 152-187 | Entity | denotes | of the NF-κB or NFAT5 binding sites |
T25798 | 290-293 | Protein | denotes | MTb |
T25797 | 776-804 | Protein | denotes | MTb co-infected (black bars) |
T25796 | 741-771 | Protein | denotes | the MTb uninfected (grey bars) |
T25795 | 114-119 | Protein | denotes | NF-κB |
T25794 | 295-323 | Entity | denotes | PBMC from four normal donors |
T25793 | 44-55 | Protein | denotes | MTb-induced |
T25792 | 717-720 | Protein | denotes | p24 |
T25791 | 168-173 | Protein | denotes | NFAT5 |
R18838 | T25795 | T25811 | themeOf | NF-κB,on binding of NFAT5 and NF-κB |
R18839 | T25797 | T25813 | themeOf | MTb co-infected (black bars),MTb co-infected (black bars) |
R18840 | T25799 | T25812 | themeOf | of the NF-κB or NFAT5 binding sites,of the NF-κB or NFAT5 binding sites |
R18841 | T25802 | T25814 | themeOf | MTb,"MTb co-infection," |
R18842 | T25804 | T25811 | themeOf | NFAT5,on binding of NFAT5 and NF-κB |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25781 | 1045-1046 | . | denotes | . |
T25780 | 1035-1045 | NNP | denotes | Bal-Env-WT |
T25779 | 1034-1035 | NNP | denotes | / |
T25778 | 1026-1034 | NNP | denotes | HIV-1Lai |
T25777 | 1023-1025 | TO | denotes | to |
T25776 | 1014-1022 | VBN | denotes | compared |
T25775 | 1011-1013 | IN | denotes | as |
T25774 | 1009-1010 | , | denotes | , |
T25773 | 1005-1009 | CD | denotes | 0.01 |
T25772 | 1004-1005 | NN | denotes | < |
T25771 | 1003-1004 | JJ | denotes | p |
T25770 | 1001-1002 | , | denotes | , |
T25769 | 999-1001 | SYM | denotes | ** |
T25768 | 997-998 | : | denotes | ; |
T25767 | 993-997 | CD | denotes | 0.05 |
T25766 | 992-993 | RB | denotes | < |
T25765 | 991-992 | VB | denotes | p |
T25764 | 989-990 | , | denotes | , |
T25763 | 988-989 | SYM | denotes | * |
T25762 | 986-987 | . | denotes | . |
T25761 | 985-986 | -RRB- | denotes | ) |
T25760 | 973-985 | RB | denotes | respectively |
T25759 | 971-972 | , | denotes | , |
T25758 | 959-971 | NN | denotes | co-infection |
T25757 | 955-958 | NNP | denotes | MTb |
T25756 | 950-954 | IN | denotes | with |
T25755 | 946-949 | CC | denotes | and |
T25754 | 938-945 | IN | denotes | without |
T25753 | 937-938 | -LRB- | denotes | ( |
T25752 | 926-936 | NNS | denotes | conditions |
T25751 | 913-925 | JJ | denotes | experimental |
T25750 | 908-912 | JJ | denotes | same |
T25749 | 904-907 | DT | denotes | the |
T25748 | 898-903 | IN | denotes | under |
T25747 | 886-897 | NN | denotes | replication |
T25746 | 880-885 | NN | denotes | virus |
T25745 | 870-879 | JJ | denotes | wild-type |
T25744 | 867-869 | TO | denotes | to |
T25743 | 858-866 | VBN | denotes | compared |
T25742 | 854-857 | VBD | denotes | was |
T25741 | 846-853 | NNS | denotes | viruses |
T25740 | 839-845 | JJ | denotes | mutant |
T25739 | 835-838 | DT | denotes | the |
T25738 | 832-834 | IN | denotes | of |
T25737 | 820-831 | NN | denotes | Replication |
T25736 | 818-819 | . | denotes | . |
T25735 | 810-818 | NNS | denotes | cultures |
T25734 | 805-809 | NNP | denotes | PBMC |
T25733 | 803-804 | -RRB- | denotes | ) |
T25732 | 799-803 | NNS | denotes | bars |
T25731 | 793-798 | JJ | denotes | black |
T25730 | 792-793 | -LRB- | denotes | ( |
T25729 | 780-791 | VBD | denotes | co-infected |
T25728 | 776-779 | NNP | denotes | MTb |
T25727 | 772-775 | CC | denotes | and |
T25726 | 770-771 | -RRB- | denotes | ) |
T25725 | 766-770 | NNS | denotes | bars |
T25724 | 761-765 | JJ | denotes | grey |
T25723 | 760-761 | -LRB- | denotes | ( |
T25722 | 749-759 | JJ | denotes | uninfected |
T25721 | 745-748 | NNP | denotes | MTb |
T25720 | 741-744 | DT | denotes | the |
T25719 | 738-740 | IN | denotes | in |
T25718 | 735-737 | CD | denotes | 12 |
T25717 | 731-734 | NN | denotes | day |
T25716 | 728-730 | IN | denotes | at |
T25715 | 721-727 | NNS | denotes | levels |
T25714 | 717-720 | JJ | denotes | p24 |
T25676 | 539-540 | -RRB- | denotes | ) |
T25675 | 538-539 | NNP | denotes | B |
T25674 | 537-538 | -LRB- | denotes | ( |
T25673 | 534-536 | CC | denotes | or |
T25672 | 532-533 | , | denotes | , |
T25671 | 523-532 | JJ | denotes | untreated |
T25670 | 518-522 | VBD | denotes | left |
T25669 | 516-517 | -RRB- | denotes | ) |
T25668 | 515-516 | NNP | denotes | A |
T25667 | 514-515 | -LRB- | denotes | ( |
T25666 | 512-513 | : | denotes | ; |
T25665 | 506-512 | RB | denotes | either |
T25664 | 502-505 | CC | denotes | and |
T25663 | 487-501 | NN | denotes | Bal-env-N5-Mut |
T25662 | 486-487 | NN | denotes | / |
T25661 | 478-486 | JJ | denotes | HIV-1Lai |
T25660 | 475-477 | CC | denotes | or |
T25659 | 473-474 | , | denotes | , |
T25658 | 470-473 | NNP | denotes | Mut |
T25657 | 469-470 | : | denotes | - |
T25656 | 465-469 | NNP | denotes | I+II |
T25655 | 454-464 | NNP | denotes | Bal-env-κB |
T25654 | 453-454 | NNP | denotes | / |
T25653 | 445-453 | NNP | denotes | HIV-1Lai |
T25652 | 443-444 | , | denotes | , |
T25651 | 437-443 | NNP | denotes | II-Mut |
T25650 | 426-436 | NNP | denotes | Bal-env-κB |
T25649 | 425-426 | NNP | denotes | / |
T25648 | 417-425 | NNP | denotes | HIV-1Lai |
T25647 | 415-416 | , | denotes | , |
T25646 | 410-415 | NNP | denotes | I-Mut |
T25645 | 399-409 | NNP | denotes | Bal-env-κB |
T25644 | 398-399 | NN | denotes | / |
T25643 | 390-398 | JJ | denotes | HIV-1Lai |
T25642 | 382-389 | NNS | denotes | mutants |
T25641 | 378-381 | DT | denotes | the |
T25640 | 375-377 | CC | denotes | or |
T25639 | 364-374 | NN | denotes | Bal-env-WT |
T25638 | 363-364 | NN | denotes | / |
T25637 | 355-363 | JJ | denotes | HIV-1Lai |
T25636 | 348-354 | CD | denotes | TCID50 |
T25635 | 343-347 | CD | denotes | 1000 |
T25634 | 338-342 | IN | denotes | with |
T25633 | 329-337 | VBN | denotes | infected |
T25632 | 324-328 | VBD | denotes | were |
T25631 | 317-323 | NNS | denotes | donors |
T25630 | 310-316 | JJ | denotes | normal |
T25629 | 305-309 | CD | denotes | four |
T25628 | 300-304 | IN | denotes | from |
T25627 | 295-299 | NNP | denotes | PBMC |
T25626 | 293-294 | . | denotes | . |
T25625 | 290-293 | NNP | denotes | MTb |
T25624 | 285-289 | IN | denotes | with |
T25623 | 272-284 | NN | denotes | co-infection |
T25622 | 266-271 | IN | denotes | after |
T25621 | 261-265 | NNP | denotes | PBMC |
T25620 | 255-260 | JJ | denotes | human |
T25619 | 252-254 | IN | denotes | in |
T25618 | 240-251 | NN | denotes | replication |
T25617 | 234-239 | NN | denotes | virus |
T25616 | 224-233 | JJ | denotes | R5-tropic |
T25615 | 215-223 | VBZ | denotes | inhibits |
T25614 | 211-214 | NNP | denotes | LTR |
T25613 | 209-210 | NNP | denotes | B |
T25612 | 201-208 | NN | denotes | subtype |
T25611 | 195-200 | NNP | denotes | HIV-1 |
T25610 | 191-194 | DT | denotes | the |
T25609 | 188-190 | IN | denotes | in |
T25608 | 182-187 | NNS | denotes | sites |
T25607 | 174-181 | JJ | denotes | binding |
T25606 | 168-173 | NNP | denotes | NFAT5 |
T25605 | 165-167 | CC | denotes | or |
T25604 | 159-164 | NNP | denotes | NF-κB |
T25603 | 155-158 | DT | denotes | the |
T25602 | 152-154 | IN | denotes | of |
T25601 | 141-151 | NN | denotes | disruption |
T25600 | 132-140 | JJ | denotes | Specific |
T25599 | 130-131 | . | denotes | . |
T25598 | 127-130 | NNP | denotes | LTR |
T25597 | 123-126 | DT | denotes | the |
T25596 | 120-122 | TO | denotes | to |
T25595 | 114-119 | NNP | denotes | NF-κB |
T25594 | 110-113 | CC | denotes | and |
T25593 | 104-109 | NNP | denotes | NFAT5 |
T25592 | 101-103 | IN | denotes | of |
T25591 | 93-100 | JJ | denotes | binding |
T25590 | 90-92 | IN | denotes | on |
T25589 | 82-89 | VBZ | denotes | depends |
T25588 | 77-81 | NNP | denotes | PBMC |
T25587 | 74-76 | IN | denotes | in |
T25586 | 62-73 | NN | denotes | replication |
T25585 | 56-61 | NN | denotes | HIV-1 |
T25584 | 44-55 | JJ | denotes | MTb-induced |
T25713 | 711-716 | JJ | denotes | viral |
T25712 | 706-710 | VBP | denotes | show |
T25711 | 695-705 | NNPS | denotes | Histograms |
T25710 | 693-694 | -RRB- | denotes | ) |
T25709 | 692-693 | $ | denotes | C |
T25708 | 691-692 | -LRB- | denotes | ( |
T25707 | 689-690 | . | denotes | . |
T25706 | 675-689 | NN | denotes | post-infection |
T25705 | 672-674 | CD | denotes | 12 |
T25704 | 668-671 | CC | denotes | and |
T25703 | 666-667 | CD | denotes | 7 |
T25702 | 664-665 | , | denotes | , |
T25701 | 663-664 | CD | denotes | 4 |
T25700 | 658-662 | NNS | denotes | days |
T25699 | 655-657 | IN | denotes | at |
T25698 | 646-654 | VBN | denotes | measured |
T25697 | 641-645 | VBD | denotes | were |
T25696 | 628-640 | NNS | denotes | supernatants |
T25695 | 620-627 | NN | denotes | culture |
T25694 | 617-619 | IN | denotes | in |
T25693 | 610-616 | NNS | denotes | levels |
T25692 | 606-609 | NN | denotes | p24 |
T25691 | 600-605 | JJ | denotes | Viral |
T25690 | 598-599 | . | denotes | . |
T25689 | 597-598 | -RRB- | denotes | ) |
T25688 | 590-597 | NNS | denotes | bacilli |
T25687 | 589-590 | VBP | denotes | ∶ |
T25686 | 584-589 | NNS | denotes | cells |
T25685 | 582-583 | CD | denotes | 1 |
T25684 | 581-582 | NN | denotes | ∶ |
T25683 | 579-581 | CD | denotes | 10 |
T25682 | 578-579 | -LRB- | denotes | ( |
T25681 | 570-577 | NNP | denotes | CDC1551 |
T25680 | 562-569 | VB | denotes | isolate |
T25679 | 558-561 | NNP | denotes | MTb |
T25678 | 553-557 | IN | denotes | with |
T25677 | 541-552 | VBN | denotes | co-infected |
R18639 | T25584 | T25586 | amod | MTb-induced,replication |
R18640 | T25585 | T25586 | compound | HIV-1,replication |
R18641 | T25586 | T25589 | nsubj | replication,depends |
R18642 | T25587 | T25586 | prep | in,replication |
R18643 | T25588 | T25587 | pobj | PBMC,in |
R18644 | T25589 | T25589 | ROOT | depends,depends |
R18645 | T25590 | T25589 | prep | on,depends |
R18646 | T25591 | T25590 | pobj | binding,on |
R18647 | T25592 | T25591 | prep | of,binding |
R18648 | T25593 | T25592 | pobj | NFAT5,of |
R18649 | T25594 | T25593 | cc | and,NFAT5 |
R18650 | T25595 | T25593 | conj | NF-κB,NFAT5 |
R18651 | T25596 | T25591 | prep | to,binding |
R18652 | T25597 | T25598 | det | the,LTR |
R18653 | T25598 | T25596 | pobj | LTR,to |
R18654 | T25599 | T25589 | punct | .,depends |
R18655 | T25600 | T25601 | amod | Specific,disruption |
R18656 | T25601 | T25615 | nsubj | disruption,inhibits |
R18657 | T25602 | T25601 | prep | of,disruption |
R18658 | T25603 | T25604 | det | the,NF-κB |
R18659 | T25604 | T25608 | nmod | NF-κB,sites |
R18660 | T25605 | T25604 | cc | or,NF-κB |
R18661 | T25606 | T25604 | conj | NFAT5,NF-κB |
R18662 | T25607 | T25608 | amod | binding,sites |
R18663 | T25608 | T25602 | pobj | sites,of |
R18664 | T25609 | T25608 | prep | in,sites |
R18665 | T25610 | T25614 | det | the,LTR |
R18666 | T25611 | T25614 | compound | HIV-1,LTR |
R18667 | T25612 | T25613 | compound | subtype,B |
R18668 | T25613 | T25614 | compound | B,LTR |
R18669 | T25614 | T25609 | pobj | LTR,in |
R18670 | T25615 | T25615 | ROOT | inhibits,inhibits |
R18671 | T25616 | T25618 | amod | R5-tropic,replication |
R18672 | T25617 | T25618 | compound | virus,replication |
R18673 | T25618 | T25615 | dobj | replication,inhibits |
R18674 | T25619 | T25618 | prep | in,replication |
R18675 | T25620 | T25621 | compound | human,PBMC |
R18676 | T25621 | T25619 | pobj | PBMC,in |
R18677 | T25622 | T25615 | prep | after,inhibits |
R18678 | T25623 | T25622 | pobj | co-infection,after |
R18679 | T25624 | T25623 | prep | with,co-infection |
R18680 | T25625 | T25624 | pobj | MTb,with |
R18681 | T25626 | T25615 | punct | .,inhibits |
R18682 | T25627 | T25633 | nsubjpass | PBMC,infected |
R18683 | T25628 | T25627 | prep | from,PBMC |
R18684 | T25629 | T25631 | nummod | four,donors |
R18685 | T25630 | T25631 | amod | normal,donors |
R18686 | T25631 | T25628 | pobj | donors,from |
R18687 | T25632 | T25633 | auxpass | were,infected |
R18688 | T25633 | T25633 | ROOT | infected,infected |
R18689 | T25634 | T25633 | prep | with,infected |
R18690 | T25635 | T25639 | nummod | 1000,Bal-env-WT |
R18691 | T25636 | T25639 | nummod | TCID50,Bal-env-WT |
R18692 | T25637 | T25639 | amod | HIV-1Lai,Bal-env-WT |
R18693 | T25638 | T25639 | compound | /,Bal-env-WT |
R18694 | T25639 | T25634 | pobj | Bal-env-WT,with |
R18695 | T25640 | T25639 | cc | or,Bal-env-WT |
R18696 | T25641 | T25642 | det | the,mutants |
R18697 | T25642 | T25670 | nsubj | mutants,left |
R18698 | T25643 | T25644 | compound | HIV-1Lai,/ |
R18699 | T25644 | T25646 | compound | /,I-Mut |
R18700 | T25645 | T25646 | compound | Bal-env-κB,I-Mut |
R18701 | T25646 | T25642 | appos | I-Mut,mutants |
R18702 | T25647 | T25646 | punct | ",",I-Mut |
R18703 | T25648 | T25651 | compound | HIV-1Lai,II-Mut |
R18704 | T25649 | T25651 | compound | /,II-Mut |
R18705 | T25650 | T25651 | compound | Bal-env-κB,II-Mut |
R18706 | T25651 | T25646 | conj | II-Mut,I-Mut |
R18707 | T25652 | T25651 | punct | ",",II-Mut |
R18708 | T25653 | T25656 | compound | HIV-1Lai,I+II |
R18709 | T25654 | T25656 | compound | /,I+II |
R18710 | T25655 | T25656 | compound | Bal-env-κB,I+II |
R18711 | T25656 | T25658 | compound | I+II,Mut |
R18712 | T25657 | T25658 | punct | -,Mut |
R18713 | T25658 | T25651 | conj | Mut,II-Mut |
R18714 | T25659 | T25658 | punct | ",",Mut |
R18715 | T25660 | T25658 | cc | or,Mut |
R18716 | T25661 | T25663 | compound | HIV-1Lai,Bal-env-N5-Mut |
R18717 | T25662 | T25663 | compound | /,Bal-env-N5-Mut |
R18718 | T25663 | T25658 | conj | Bal-env-N5-Mut,Mut |
R18719 | T25664 | T25663 | cc | and,Bal-env-N5-Mut |
R18720 | T25665 | T25663 | conj | either,Bal-env-N5-Mut |
R18721 | T25666 | T25658 | punct | ;,Mut |
R18722 | T25667 | T25668 | punct | (,A |
R18723 | T25668 | T25658 | conj | A,Mut |
R18724 | T25669 | T25658 | punct | ),Mut |
R18725 | T25670 | T25633 | advcl | left,infected |
R18726 | T25671 | T25670 | oprd | untreated,left |
R18727 | T25672 | T25670 | punct | ",",left |
R18728 | T25673 | T25670 | cc | or,left |
R18729 | T25674 | T25677 | punct | (,co-infected |
R18730 | T25675 | T25677 | dep | B,co-infected |
R18731 | T25676 | T25677 | punct | ),co-infected |
R18732 | T25677 | T25670 | conj | co-infected,left |
R18733 | T25678 | T25677 | prep | with,co-infected |
R18734 | T25679 | T25678 | pobj | MTb,with |
R18735 | T25680 | T25670 | conj | isolate,left |
R18736 | T25681 | T25680 | dobj | CDC1551,isolate |
R18737 | T25682 | T25681 | punct | (,CDC1551 |
R18738 | T25683 | T25684 | nummod | 10,∶ |
R18739 | T25684 | T25680 | npadvmod | ∶,isolate |
R18740 | T25685 | T25686 | nummod | 1,cells |
R18741 | T25686 | T25684 | appos | cells,∶ |
R18742 | T25687 | T25688 | compound | ∶,bacilli |
R18743 | T25688 | T25686 | appos | bacilli,cells |
R18744 | T25689 | T25686 | punct | ),cells |
R18745 | T25690 | T25670 | punct | .,left |
R18746 | T25691 | T25693 | amod | Viral,levels |
R18747 | T25692 | T25693 | compound | p24,levels |
R18748 | T25693 | T25698 | nsubjpass | levels,measured |
R18749 | T25694 | T25693 | prep | in,levels |
R18750 | T25695 | T25694 | pobj | culture,in |
R18751 | T25696 | T25698 | nsubjpass | supernatants,measured |
R18752 | T25697 | T25698 | auxpass | were,measured |
R18753 | T25698 | T25698 | ROOT | measured,measured |
R18754 | T25699 | T25698 | prep | at,measured |
R18755 | T25700 | T25699 | pobj | days,at |
R18756 | T25701 | T25700 | nummod | 4,days |
R18757 | T25702 | T25700 | punct | ",",days |
R18758 | T25703 | T25700 | conj | 7,days |
R18759 | T25704 | T25703 | cc | and,7 |
R18760 | T25705 | T25706 | nummod | 12,post-infection |
R18761 | T25706 | T25703 | conj | post-infection,7 |
R18762 | T25707 | T25698 | punct | .,measured |
R18763 | T25708 | T25709 | punct | (,C |
R18764 | T25709 | T25709 | ROOT | C,C |
R18765 | T25710 | T25709 | punct | ),C |
R18766 | T25711 | T25712 | nsubj | Histograms,show |
R18767 | T25712 | T25712 | ROOT | show,show |
R18768 | T25713 | T25715 | amod | viral,levels |
R18769 | T25714 | T25715 | amod | p24,levels |
R18770 | T25715 | T25712 | dobj | levels,show |
R18771 | T25716 | T25712 | prep | at,show |
R18772 | T25717 | T25716 | pobj | day,at |
R18773 | T25718 | T25717 | nummod | 12,day |
R18774 | T25719 | T25712 | prep | in,show |
R18775 | T25720 | T25722 | det | the,uninfected |
R18776 | T25721 | T25722 | compound | MTb,uninfected |
R18777 | T25722 | T25719 | pobj | uninfected,in |
R18778 | T25723 | T25725 | punct | (,bars |
R18779 | T25724 | T25725 | amod | grey,bars |
R18780 | T25725 | T25722 | appos | bars,uninfected |
R18781 | T25726 | T25725 | punct | ),bars |
R18782 | T25727 | T25712 | cc | and,show |
R18783 | T25728 | T25729 | compound | MTb,co-infected |
R18784 | T25729 | T25712 | conj | co-infected,show |
R18785 | T25730 | T25732 | punct | (,bars |
R18786 | T25731 | T25732 | amod | black,bars |
R18787 | T25732 | T25729 | appos | bars,co-infected |
R18788 | T25733 | T25729 | punct | ),co-infected |
R18789 | T25734 | T25735 | compound | PBMC,cultures |
R18790 | T25735 | T25735 | ROOT | cultures,cultures |
R18791 | T25736 | T25735 | punct | .,cultures |
R18792 | T25737 | T25743 | nsubjpass | Replication,compared |
R18793 | T25738 | T25737 | prep | of,Replication |
R18794 | T25739 | T25741 | det | the,viruses |
R18795 | T25740 | T25741 | amod | mutant,viruses |
R18796 | T25741 | T25738 | pobj | viruses,of |
R18797 | T25742 | T25743 | auxpass | was,compared |
R18798 | T25743 | T25743 | ROOT | compared,compared |
R18799 | T25744 | T25743 | prep | to,compared |
R18800 | T25745 | T25747 | amod | wild-type,replication |
R18801 | T25746 | T25747 | compound | virus,replication |
R18802 | T25747 | T25744 | pobj | replication,to |
R18803 | T25748 | T25747 | prep | under,replication |
R18804 | T25749 | T25752 | det | the,conditions |
R18805 | T25750 | T25752 | amod | same,conditions |
R18806 | T25751 | T25752 | amod | experimental,conditions |
R18807 | T25752 | T25748 | pobj | conditions,under |
R18808 | T25753 | T25748 | punct | (,under |
R18809 | T25754 | T25747 | prep | without,replication |
R18810 | T25755 | T25754 | cc | and,without |
R18811 | T25756 | T25754 | conj | with,without |
R18812 | T25757 | T25758 | compound | MTb,co-infection |
R18813 | T25758 | T25756 | pobj | co-infection,with |
R18814 | T25759 | T25758 | punct | ",",co-infection |
R18815 | T25760 | T25743 | advmod | respectively,compared |
R18816 | T25761 | T25743 | punct | ),compared |
R18817 | T25762 | T25743 | punct | .,compared |
R18818 | T25763 | T25765 | punct | *,p |
R18819 | T25764 | T25765 | punct | ",",p |
R18820 | T25765 | T25765 | ROOT | p,p |
R18821 | T25766 | T25765 | advmod | <,p |
R18822 | T25767 | T25766 | nummod | 0.05,< |
R18823 | T25768 | T25776 | punct | ;,compared |
R18824 | T25769 | T25776 | punct | **,compared |
R18825 | T25770 | T25776 | punct | ",",compared |
R18826 | T25771 | T25772 | compound | p,< |
R18827 | T25772 | T25773 | compound | <,0.01 |
R18828 | T25773 | T25776 | nsubjpass | 0.01,compared |
R18829 | T25774 | T25776 | punct | ",",compared |
R18830 | T25775 | T25776 | mark | as,compared |
R18831 | T25776 | T25765 | prep | compared,p |
R18832 | T25777 | T25776 | prep | to,compared |
R18833 | T25778 | T25780 | compound | HIV-1Lai,Bal-Env-WT |
R18834 | T25779 | T25780 | compound | /,Bal-Env-WT |
R18835 | T25780 | T25777 | pobj | Bal-Env-WT,to |
R18836 | T25781 | T25776 | punct | .,compared |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25555 | 1043-1045 | Protein | denotes | WT |
T25554 | 1039-1042 | Protein | denotes | Env |
T25553 | 717-720 | Protein | denotes | p24 |
T25552 | 606-609 | Protein | denotes | p24 |
T25551 | 498-501 | Protein | denotes | Mut |
T25550 | 495-497 | Protein | denotes | N5 |
T25549 | 491-494 | Protein | denotes | env |
T25548 | 470-473 | Protein | denotes | Mut |
T25547 | 462-469 | Protein | denotes | κB I+II |
T25546 | 458-461 | Protein | denotes | env |
T25545 | 440-443 | Protein | denotes | Mut |
T25544 | 434-439 | Protein | denotes | κB II |
T25543 | 430-433 | Protein | denotes | env |
T25542 | 412-415 | Protein | denotes | Mut |
T25541 | 407-411 | Protein | denotes | κB I |
T25540 | 403-406 | Protein | denotes | env |
T25539 | 372-374 | Protein | denotes | WT |
T25538 | 368-371 | Protein | denotes | env |
T25537 | 141-151 | Negative_regulation | denotes | disruption |
T25536 | 141-151 | Negative_regulation | denotes | disruption |
T25535 | 141-151 | Negative_regulation | denotes | disruption |
T25534 | 195-214 | Protein | denotes | HIV-1 subtype B LTR |
T25533 | 168-187 | Protein | denotes | NFAT5 binding sites |
T25532 | 159-164 | Protein | denotes | NF-κB |
T25531 | 93-100 | Binding | denotes | binding |
T25530 | 93-100 | Binding | denotes | binding |
T25529 | 114-119 | Protein | denotes | NF-κB |
T25528 | 104-109 | Protein | denotes | NFAT5 |
R18629 | T25528 | T25530 | themeOf | NFAT5,binding |
R18630 | T25529 | T25531 | themeOf | NF-κB,binding |
R18631 | T25532 | T25535 | themeOf | NF-κB,disruption |
R18632 | T25533 | T25536 | themeOf | NFAT5 binding sites,disruption |
R18633 | T25534 | T25537 | themeOf | HIV-1 subtype B LTR,disruption |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25251 | 606-609 | Protein | denotes | p24 |
T25250 | 491-494 | Protein | denotes | env |
T25249 | 458-461 | Protein | denotes | env |
T25248 | 430-433 | Protein | denotes | env |
T25247 | 403-406 | Protein | denotes | env |
T25246 | 368-371 | Protein | denotes | env |
T25245 | 104-109 | Protein | denotes | NFAT5 |
T25253 | 93-100 | Binding | denotes | binding |
T25252 | 717-720 | Protein | denotes | p24 |
R18446 | T25245 | T25253 | themeOf | NFAT5,binding |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25270 | 717-720 | Protein | denotes | p24 |
T25269 | 606-609 | Protein | denotes | p24 |
T25268 | 491-494 | Protein | denotes | env |
T25267 | 458-461 | Protein | denotes | env |
T25266 | 430-433 | Protein | denotes | env |
T25265 | 403-406 | Protein | denotes | env |
T25264 | 368-371 | Protein | denotes | env |
T25263 | 104-109 | Protein | denotes | NFAT5 |
T25262 | 93-100 | Binding | denotes | binding |
T25261 | 717-720 | Protein | denotes | p24 |
T25260 | 606-609 | Protein | denotes | p24 |
T25259 | 491-494 | Protein | denotes | env |
T25258 | 458-461 | Protein | denotes | env |
T25257 | 430-433 | Protein | denotes | env |
T25256 | 403-406 | Protein | denotes | env |
T25255 | 368-371 | Protein | denotes | env |
T25254 | 104-109 | Protein | denotes | NFAT5 |
R18447 | T25263 | T25262 | themeOf | NFAT5,binding |