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PMC:3279418 / 15343-15593 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5200 0-16 JJ denotes Stimulus-induced
T5201 17-32 NN denotes phosphorylation
T5202 33-35 IN denotes of
T5203 36-39 DT denotes the
T5204 40-43 NN denotes IκB
T5205 44-50 NN denotes kinase
T5206 51-52 -LRB- denotes (
T5207 52-58 NN denotes IKK1/2
T5208 58-59 -RRB- denotes )
T5209 60-62 VB denotes is
T5210 63-65 DT denotes an
T5211 66-75 JJ denotes essential
T5212 76-80 NN denotes step
T5213 81-83 IN denotes in
T5214 84-89 NN denotes NF-κB
T5215 90-99 NN denotes signaling
T5216 99-100 -COMMA- denotes ,
T5217 101-109 VB denotes allowing
T5218 110-125 NN denotes phosphorylation
T5219 126-129 CC denotes and
T5220 130-149 JJ denotes proteasome-mediated
T5221 150-161 NN denotes degradation
T5222 162-164 IN denotes of
T5223 165-168 DT denotes the
T5224 169-174 NN denotes NF-κB
T5225 175-184 NN denotes inhibitor
T5226 185-189 NN denotes IκBα
T5227 190-192 TO denotes to
T5228 193-200 VB denotes release
T5229 201-204 DT denotes the
T5230 205-210 NN denotes NF-κB
T5231 211-224 NN denotes transcription
T5232 225-232 NN denotes factors
T5233 233-237 IN denotes into
T5234 238-241 DT denotes the
T5235 242-249 NN denotes nucleus
R4334 T5201 T5200 arg1Of phosphorylation,Stimulus-induced
R4335 T5201 T5202 arg1Of phosphorylation,of
R4336 T5201 T5209 arg1Of phosphorylation,is
R4337 T5205 T5202 arg2Of kinase,of
R4338 T5205 T5203 arg1Of kinase,the
R4339 T5205 T5204 arg1Of kinase,IκB
R4340 T5205 T5206 arg1Of kinase,(
R4341 T5207 T5206 arg2Of IKK1/2,(
R4342 T5208 T5206 arg3Of ),(
R4343 T5209 T5216 arg1Of is,","
R4344 T5209 T5217 modOf is,allowing
R4345 T5212 T5209 arg2Of step,is
R4346 T5212 T5210 arg1Of step,an
R4347 T5212 T5211 arg1Of step,essential
R4348 T5212 T5213 arg1Of step,in
R4349 T5215 T5213 arg2Of signaling,in
R4350 T5215 T5214 arg1Of signaling,NF-κB
R4351 T5218 T5219 arg1Of phosphorylation,and
R4352 T5219 T5217 arg2Of and,allowing
R4353 T5219 T5222 arg1Of and,of
R4354 T5219 T5228 arg1Of and,release
R4355 T5221 T5219 arg2Of degradation,and
R4356 T5221 T5220 arg1Of degradation,proteasome-mediated
R4357 T5226 T5222 arg2Of IκBα,of
R4358 T5226 T5223 arg1Of IκBα,the
R4359 T5226 T5224 arg1Of IκBα,NF-κB
R4360 T5226 T5225 arg1Of IκBα,inhibitor
R4361 T5228 T5217 arg3Of release,allowing
R4362 T5228 T5227 arg1Of release,to
R4363 T5228 T5233 arg1Of release,into
R4364 T5232 T5228 arg2Of factors,release
R4365 T5232 T5229 arg1Of factors,the
R4366 T5232 T5230 arg1Of factors,NF-κB
R4367 T5232 T5231 arg1Of factors,transcription
R4368 T5235 T5233 arg2Of nucleus,into
R4369 T5235 T5234 arg1Of nucleus,the

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4785 0-16 JJ denotes Stimulus-induced
T4786 17-32 NN denotes phosphorylation
T4787 33-35 IN denotes of
T4788 36-39 DT denotes the
T4789 40-43 NNP denotes IκB
T4790 44-50 NN denotes kinase
T4791 51-52 -LRB- denotes (
T4792 52-58 NNP denotes IKK1/2
T4793 58-59 -RRB- denotes )
T4794 60-62 VBZ denotes is
T4795 63-65 DT denotes an
T4796 66-75 JJ denotes essential
T4797 76-80 NN denotes step
T4798 81-83 IN denotes in
T4799 84-89 JJ denotes NF-κB
T4800 90-99 VBG denotes signaling
T4801 99-100 , denotes ,
T4802 101-109 VBG denotes allowing
T4803 110-125 NN denotes phosphorylation
T4804 126-129 CC denotes and
T4805 130-149 JJ denotes proteasome-mediated
T4806 150-161 NN denotes degradation
T4807 162-164 IN denotes of
T4808 165-168 DT denotes the
T4809 169-174 NNP denotes NF-κB
T4810 175-184 NN denotes inhibitor
T4811 185-189 NNP denotes IκBα
T4812 190-192 TO denotes to
T4813 193-200 VB denotes release
T4814 201-204 DT denotes the
T4815 205-210 JJ denotes NF-κB
T4816 211-224 NN denotes transcription
T4817 225-232 NNS denotes factors
T4818 233-237 IN denotes into
T4819 238-241 DT denotes the
T4820 242-249 NN denotes nucleus
T4821 249-250 . denotes .
R3920 T4785 T4786 amod Stimulus-induced,phosphorylation
R3921 T4786 T4794 nsubj phosphorylation,is
R3922 T4787 T4786 prep of,phosphorylation
R3923 T4788 T4790 det the,kinase
R3924 T4789 T4790 compound IκB,kinase
R3925 T4790 T4787 pobj kinase,of
R3926 T4791 T4792 punct (,IKK1/2
R3927 T4792 T4790 appos IKK1/2,kinase
R3928 T4793 T4790 punct ),kinase
R3929 T4794 T4794 ROOT is,is
R3930 T4795 T4797 det an,step
R3931 T4796 T4797 amod essential,step
R3932 T4797 T4794 attr step,is
R3933 T4798 T4797 prep in,step
R3934 T4799 T4800 amod NF-κB,signaling
R3935 T4800 T4798 pcomp signaling,in
R3936 T4801 T4800 punct ",",signaling
R3937 T4802 T4800 conj allowing,signaling
R3938 T4803 T4806 amod phosphorylation,degradation
R3939 T4804 T4803 cc and,phosphorylation
R3940 T4805 T4803 conj proteasome-mediated,phosphorylation
R3941 T4806 T4802 dobj degradation,allowing
R3942 T4807 T4806 prep of,degradation
R3943 T4808 T4810 det the,inhibitor
R3944 T4809 T4810 compound NF-κB,inhibitor
R3945 T4810 T4807 pobj inhibitor,of
R3946 T4811 T4806 appos IκBα,degradation
R3947 T4812 T4813 aux to,release
R3948 T4813 T4802 ccomp release,allowing
R3949 T4814 T4817 det the,factors
R3950 T4815 T4817 amod NF-κB,factors
R3951 T4816 T4817 compound transcription,factors
R3952 T4817 T4813 dobj factors,release
R3953 T4818 T4813 prep into,release
R3954 T4819 T4820 det the,nucleus
R3955 T4820 T4818 pobj nucleus,into
R3956 T4821 T4794 punct .,is

GO-BP

Id Subject Object Predicate Lexical cue
T5384 90-99 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T5397 211-224 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5411 17-32 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5412 110-125 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5414 17-43 http://purl.obolibrary.org/obo/GO_0007252 denotes phosphorylation of the IκB
T5415 169-184 http://purl.obolibrary.org/obo/GO_0007252 denotes NF-κB inhibitor
T5416 150-161 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T5417 169-184 http://purl.obolibrary.org/obo/GO_0032088 denotes NF-κB inhibitor
T5418 211-249 http://purl.obolibrary.org/obo/GO_0042991 denotes transcription factors into the nucleus

GO-CC

Id Subject Object Predicate Lexical cue
T5435 130-140 http://purl.obolibrary.org/obo/GO_0000502 denotes proteasome
T5436 242-249 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T4485 0-250 Sentence denotes Stimulus-induced phosphorylation of the IκB kinase (IKK1/2) is an essential step in NF-κB signaling, allowing phosphorylation and proteasome-mediated degradation of the NF-κB inhibitor IκBα to release the NF-κB transcription factors into the nucleus.
T104 0-250 Sentence denotes Stimulus-induced phosphorylation of the IκB kinase (IKK1/2) is an essential step in NF-κB signaling, allowing phosphorylation and proteasome-mediated degradation of the NF-κB inhibitor IκBα to release the NF-κB transcription factors into the nucleus.

events-check-again

Id Subject Object Predicate Lexical cue
T5601 52-56 Protein denotes IKK1
T5602 57-58 Protein denotes 2
T5603 101-109 Positive_regulation denotes allowing
T5604 101-109 Positive_regulation denotes allowing
T5605 110-125 Phosphorylation denotes phosphorylation
T5606 141-149 Positive_regulation denotes mediated
T5607 150-161 Protein_catabolism denotes degradation
T5608 185-189 Protein denotes IκBα
R4527 T5605 T5604 themeOf phosphorylation,allowing
R4528 T5607 T5603 themeOf degradation,allowing
R4529 T5607 T5606 themeOf degradation,mediated
R4530 T5608 T5605 themeOf IκBα,phosphorylation
R4531 T5608 T5607 themeOf IκBα,degradation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5685 40-50 Protein denotes IκB kinase
T5686 52-58 Protein denotes IKK1/2
T5687 84-89 Protein denotes NF-κB
T5688 169-174 Protein denotes NF-κB
T5689 185-189 Protein denotes IκBα
T5690 205-232 Protein denotes NF-κB transcription factors
T5691 17-32 Phosphorylation denotes phosphorylation
T5692 17-32 Phosphorylation denotes phosphorylation
T5693 110-125 Phosphorylation denotes phosphorylation
T5694 110-125 Phosphorylation denotes phosphorylation
T5695 150-161 Protein_catabolism denotes degradation
T5696 150-161 Protein_catabolism denotes degradation
T5697 150-161 Protein_catabolism denotes degradation
T5698 242-249 Entity denotes nucleus
T5699 0-16 Positive_regulation denotes Stimulus-induced
T5700 0-16 Positive_regulation denotes Stimulus-induced
T5701 101-109 Positive_regulation denotes allowing
T5702 101-109 Positive_regulation denotes allowing
T5703 101-109 Positive_regulation denotes allowing
T5704 130-149 Positive_regulation denotes proteasome-mediated
T5705 130-149 Positive_regulation denotes proteasome-mediated
T5706 130-149 Positive_regulation denotes proteasome-mediated
T5707 193-200 Localization denotes release
R4568 T5685 T5691 themeOf IκB kinase,phosphorylation
R4569 T5686 T5692 themeOf IKK1/2,phosphorylation
R4570 T5686 T5695 themeOf IKK1/2,degradation
R4571 T5688 T5693 themeOf NF-κB,phosphorylation
R4572 T5688 T5696 themeOf NF-κB,degradation
R4573 T5689 T5694 themeOf IκBα,phosphorylation
R4574 T5689 T5697 themeOf IκBα,degradation
R4575 T5690 T5707 themeOf NF-κB transcription factors,release
R4576 T5691 T5699 themeOf phosphorylation,Stimulus-induced
R4577 T5692 T5700 themeOf phosphorylation,Stimulus-induced
R4578 T5695 T5701 themeOf degradation,allowing
R4579 T5695 T5704 themeOf degradation,proteasome-mediated
R4580 T5696 T5702 themeOf degradation,allowing
R4581 T5696 T5705 themeOf degradation,proteasome-mediated
R4582 T5697 T5703 themeOf degradation,allowing
R4583 T5697 T5706 themeOf degradation,proteasome-mediated
R4584 T5698 T5707 locationOf nucleus,release

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4443 52-56 Protein denotes IKK1
T4444 57-58 Protein denotes 2
T4445 101-109 Positive_regulation denotes allowing
T4446 101-109 Positive_regulation denotes allowing
T4447 110-125 Phosphorylation denotes phosphorylation
T4448 141-149 Positive_regulation denotes mediated
T4449 150-161 Protein_catabolism denotes degradation
T4450 185-189 Protein denotes IκBα
R3609 T4447 T4446 themeOf phosphorylation,allowing
R3610 T4449 T4445 themeOf degradation,allowing
R3611 T4449 T4448 themeOf degradation,mediated
R3612 T4450 T4447 themeOf IκBα,phosphorylation
R3613 T4450 T4449 themeOf IκBα,degradation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5337 40-50 Q60680-2 denotes IκB kinase
T5338 40-50 O15111 denotes IκB kinase
T5339 52-56 O15111 denotes IKK1
T5340 52-56 Q60680-2 denotes IKK1
T5341 185-189 P25963 denotes IκBα

test2

Id Subject Object Predicate Lexical cue
T4384 52-56 Protein denotes IKK1
T4385 57-58 Protein denotes 2
T4386 110-125 Phosphorylation denotes phosphorylation
T4387 150-161 Protein_catabolism denotes degradation
T4388 185-189 Protein denotes IκBα
T4389 193-200 Localization denotes release
R3584 T4388 T4386 themeOf IκBα,phosphorylation
R3585 T4388 T4389 themeOf IκBα,release
R3586 T4388 T4387 themeOf IκBα,degradation