PMC:3279418 / 12602-12758 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T14444","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T14445","span":{"begin":3,"end":4},"obj":"CD"},{"id":"T14446","span":{"begin":4,"end":5},"obj":"-COMMA-"},{"id":"T14447","span":{"begin":6,"end":7},"obj":"CD"},{"id":"T14448","span":{"begin":8,"end":11},"obj":"CC"},{"id":"T14449","span":{"begin":12,"end":13},"obj":"CD"},{"id":"T14450","span":{"begin":14,"end":19},"obj":"NN"},{"id":"T14451","span":{"begin":19,"end":20},"obj":"-COMMA-"},{"id":"T14452","span":{"begin":21,"end":26},"obj":"JJ"},{"id":"T14453","span":{"begin":27,"end":30},"obj":"NN"},{"id":"T14454","span":{"begin":31,"end":34},"obj":"VB"},{"id":"T14455","span":{"begin":35,"end":44},"obj":"VB"},{"id":"T14456","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T14457","span":{"begin":49,"end":56},"obj":"JJ"},{"id":"T14458","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T14459","span":{"begin":60,"end":67},"obj":"NN"},{"id":"T14460","span":{"begin":68,"end":70},"obj":"TO"},{"id":"T14461","span":{"begin":71,"end":78},"obj":"VB"},{"id":"T14462","span":{"begin":79,"end":82},"obj":"DT"},{"id":"T14463","span":{"begin":83,"end":93},"obj":"NN"},{"id":"T14464","span":{"begin":94,"end":96},"obj":"IN"},{"id":"T14465","span":{"begin":97,"end":104},"obj":"NN"},{"id":"T14466","span":{"begin":105,"end":106},"obj":"-LRB-"},{"id":"T14467","span":{"begin":106,"end":107},"obj":"NN"},{"id":"T14468","span":{"begin":107,"end":108},"obj":"-COMMA-"},{"id":"T14469","span":{"begin":108,"end":109},"obj":"NN"},{"id":"T14470","span":{"begin":109,"end":110},"obj":"-RRB-"},{"id":"T14471","span":{"begin":110,"end":111},"obj":"-COMMA-"},{"id":"T14472","span":{"begin":112,"end":115},"obj":"NN"},{"id":"T14473","span":{"begin":116,"end":117},"obj":"-LRB-"},{"id":"T14474","span":{"begin":117,"end":118},"obj":"NN"},{"id":"T14475","span":{"begin":118,"end":119},"obj":"-COMMA-"},{"id":"T14476","span":{"begin":119,"end":120},"obj":"NN"},{"id":"T14477","span":{"begin":120,"end":121},"obj":"-RRB-"},{"id":"T14478","span":{"begin":121,"end":122},"obj":"-COMMA-"},{"id":"T14479","span":{"begin":123,"end":128},"obj":"NN"},{"id":"T14480","span":{"begin":129,"end":130},"obj":"-LRB-"},{"id":"T14481","span":{"begin":130,"end":131},"obj":"NN"},{"id":"T14482","span":{"begin":131,"end":132},"obj":"-COMMA-"},{"id":"T14483","span":{"begin":132,"end":133},"obj":"NN"},{"id":"T14484","span":{"begin":133,"end":134},"obj":"-RRB-"},{"id":"T14485","span":{"begin":134,"end":135},"obj":"-COMMA-"},{"id":"T14486","span":{"begin":136,"end":139},"obj":"CC"},{"id":"T14487","span":{"begin":140,"end":144},"obj":"NN"},{"id":"T14488","span":{"begin":145,"end":146},"obj":"-LRB-"},{"id":"T14489","span":{"begin":146,"end":147},"obj":"NN"},{"id":"T14490","span":{"begin":147,"end":148},"obj":"-COMMA-"},{"id":"T14491","span":{"begin":148,"end":149},"obj":"NN"},{"id":"T14492","span":{"begin":149,"end":150},"obj":"-RRB-"},{"id":"T14493","span":{"begin":151,"end":155},"obj":"NN"}],"relations":[{"id":"R12087","pred":"arg1Of","subj":"T14445","obj":"T14446"},{"id":"R12088","pred":"arg1Of","subj":"T14446","obj":"T14448"},{"id":"R12089","pred":"arg2Of","subj":"T14447","obj":"T14446"},{"id":"R12090","pred":"arg2Of","subj":"T14449","obj":"T14448"},{"id":"R12091","pred":"arg2Of","subj":"T14450","obj":"T14444"},{"id":"R12092","pred":"arg1Of","subj":"T14450","obj":"T14445"},{"id":"R12093","pred":"arg1Of","subj":"T14450","obj":"T14447"},{"id":"R12094","pred":"arg1Of","subj":"T14450","obj":"T14449"},{"id":"R12095","pred":"arg1Of","subj":"T14453","obj":"T14452"},{"id":"R12096","pred":"arg1Of","subj":"T14453","obj":"T14454"},{"id":"R12097","pred":"arg2Of","subj":"T14453","obj":"T14455"},{"id":"R12098","pred":"arg1Of","subj":"T14453","obj":"T14457"},{"id":"R12099","pred":"arg1Of","subj":"T14455","obj":"T14456"},{"id":"R12100","pred":"arg1Of","subj":"T14456","obj":"T14444"},{"id":"R12101","pred":"arg1Of","subj":"T14456","obj":"T14451"},{"id":"R12102","pred":"arg2Of","subj":"T14456","obj":"T14454"},{"id":"R12103","pred":"arg2Of","subj":"T14457","obj":"T14456"},{"id":"R12104","pred":"arg1Of","subj":"T14457","obj":"T14458"},{"id":"R12105","pred":"arg2Of","subj":"T14459","obj":"T14458"},{"id":"R12106","pred":"modOf","subj":"T14459","obj":"T14460"},{"id":"R12107","pred":"arg1Of","subj":"T14461","obj":"T14460"},{"id":"R12108","pred":"arg1Of","subj":"T14463","obj":"T14464"},{"id":"R12109","pred":"arg1Of","subj":"T14463","obj":"T14478"},{"id":"R12110","pred":"arg1Of","subj":"T14465","obj":"T14466"},{"id":"R12111","pred":"arg1Of","subj":"T14465","obj":"T14471"},{"id":"R12112","pred":"arg2Of","subj":"T14467","obj":"T14466"},{"id":"R12113","pred":"arg1Of","subj":"T14467","obj":"T14468"},{"id":"R12114","pred":"arg2Of","subj":"T14469","obj":"T14468"},{"id":"R12115","pred":"arg3Of","subj":"T14470","obj":"T14466"},{"id":"R12116","pred":"arg2Of","subj":"T14471","obj":"T14464"},{"id":"R12117","pred":"arg1Of","subj":"T14471","obj":"T14473"},{"id":"R12118","pred":"arg2Of","subj":"T14472","obj":"T14471"},{"id":"R12119","pred":"arg2Of","subj":"T14474","obj":"T14473"},{"id":"R12120","pred":"arg1Of","subj":"T14474","obj":"T14475"},{"id":"R12121","pred":"arg2Of","subj":"T14476","obj":"T14475"},{"id":"R12122","pred":"arg3Of","subj":"T14477","obj":"T14473"},{"id":"R12123","pred":"arg2Of","subj":"T14478","obj":"T14461"},{"id":"R12124","pred":"arg1Of","subj":"T14478","obj":"T14462"},{"id":"R12125","pred":"arg1Of","subj":"T14479","obj":"T14480"},{"id":"R12126","pred":"arg1Of","subj":"T14479","obj":"T14486"},{"id":"R12127","pred":"arg2Of","subj":"T14481","obj":"T14480"},{"id":"R12128","pred":"arg1Of","subj":"T14481","obj":"T14482"},{"id":"R12129","pred":"arg2Of","subj":"T14483","obj":"T14482"},{"id":"R12130","pred":"arg3Of","subj":"T14484","obj":"T14480"},{"id":"R12131","pred":"arg2Of","subj":"T14486","obj":"T14478"},{"id":"R12132","pred":"arg1Of","subj":"T14486","obj":"T14485"},{"id":"R12133","pred":"arg1Of","subj":"T14487","obj":"T14488"},{"id":"R12134","pred":"arg2Of","subj":"T14489","obj":"T14488"},{"id":"R12135","pred":"arg1Of","subj":"T14489","obj":"T14490"},{"id":"R12136","pred":"arg1Of","subj":"T14489","obj":"T14491"},{"id":"R12137","pred":"arg3Of","subj":"T14492","obj":"T14488"},{"id":"R12138","pred":"arg2Of","subj":"T14493","obj":"T14486"},{"id":"R12139","pred":"arg1Of","subj":"T14493","obj":"T14487"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T14323","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T14324","span":{"begin":3,"end":4},"obj":"CD"},{"id":"T14325","span":{"begin":4,"end":5},"obj":","},{"id":"T14326","span":{"begin":6,"end":7},"obj":"CD"},{"id":"T14327","span":{"begin":8,"end":11},"obj":"CC"},{"id":"T14328","span":{"begin":12,"end":13},"obj":"CD"},{"id":"T14329","span":{"begin":14,"end":19},"obj":"NNS"},{"id":"T14330","span":{"begin":19,"end":20},"obj":","},{"id":"T14331","span":{"begin":21,"end":26},"obj":"JJ"},{"id":"T14332","span":{"begin":27,"end":30},"obj":"NNP"},{"id":"T14333","span":{"begin":31,"end":34},"obj":"VBD"},{"id":"T14334","span":{"begin":35,"end":44},"obj":"VBN"},{"id":"T14335","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T14336","span":{"begin":49,"end":56},"obj":"JJ"},{"id":"T14337","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T14338","span":{"begin":60,"end":67},"obj":"NNP"},{"id":"T14339","span":{"begin":68,"end":70},"obj":"TO"},{"id":"T14340","span":{"begin":71,"end":78},"obj":"VB"},{"id":"T14341","span":{"begin":79,"end":82},"obj":"DT"},{"id":"T14342","span":{"begin":83,"end":93},"obj":"NN"},{"id":"T14343","span":{"begin":94,"end":96},"obj":"IN"},{"id":"T14344","span":{"begin":97,"end":104},"obj":"NNP"},{"id":"T14345","span":{"begin":105,"end":106},"obj":"-LRB-"},{"id":"T14346","span":{"begin":106,"end":107},"obj":"NNP"},{"id":"T14347","span":{"begin":107,"end":108},"obj":","},{"id":"T14348","span":{"begin":108,"end":109},"obj":"NNP"},{"id":"T14349","span":{"begin":109,"end":110},"obj":"-RRB-"},{"id":"T14350","span":{"begin":110,"end":111},"obj":","},{"id":"T14351","span":{"begin":112,"end":115},"obj":"NNP"},{"id":"T14352","span":{"begin":116,"end":117},"obj":"-LRB-"},{"id":"T14353","span":{"begin":117,"end":118},"obj":"NNP"},{"id":"T14354","span":{"begin":118,"end":119},"obj":","},{"id":"T14355","span":{"begin":119,"end":120},"obj":"NNP"},{"id":"T14356","span":{"begin":120,"end":121},"obj":"-RRB-"},{"id":"T14357","span":{"begin":121,"end":122},"obj":","},{"id":"T14358","span":{"begin":123,"end":128},"obj":"NNP"},{"id":"T14359","span":{"begin":129,"end":130},"obj":"-LRB-"},{"id":"T14360","span":{"begin":130,"end":131},"obj":"NNP"},{"id":"T14361","span":{"begin":131,"end":132},"obj":","},{"id":"T14362","span":{"begin":132,"end":133},"obj":"NN"},{"id":"T14363","span":{"begin":133,"end":134},"obj":"-RRB-"},{"id":"T14364","span":{"begin":134,"end":135},"obj":","},{"id":"T14365","span":{"begin":136,"end":139},"obj":"CC"},{"id":"T14366","span":{"begin":140,"end":144},"obj":"NNP"},{"id":"T14367","span":{"begin":145,"end":146},"obj":"-LRB-"},{"id":"T14368","span":{"begin":146,"end":147},"obj":"NNP"},{"id":"T14369","span":{"begin":147,"end":148},"obj":","},{"id":"T14370","span":{"begin":148,"end":149},"obj":"NNP"},{"id":"T14371","span":{"begin":149,"end":150},"obj":"-RRB-"},{"id":"T14372","span":{"begin":151,"end":155},"obj":"NNP"},{"id":"T14373","span":{"begin":155,"end":156},"obj":"."}],"relations":[{"id":"R11965","pred":"prep","subj":"T14323","obj":"T14334"},{"id":"R11966","pred":"pobj","subj":"T14324","obj":"T14323"},{"id":"R11967","pred":"punct","subj":"T14325","obj":"T14334"},{"id":"R11968","pred":"nummod","subj":"T14326","obj":"T14329"},{"id":"R11969","pred":"cc","subj":"T14327","obj":"T14326"},{"id":"R11970","pred":"conj","subj":"T14328","obj":"T14326"},{"id":"R11971","pred":"npadvmod","subj":"T14329","obj":"T14334"},{"id":"R11972","pred":"punct","subj":"T14330","obj":"T14334"},{"id":"R11973","pred":"amod","subj":"T14331","obj":"T14332"},{"id":"R11974","pred":"nsubjpass","subj":"T14332","obj":"T14334"},{"id":"R11975","pred":"auxpass","subj":"T14333","obj":"T14334"},{"id":"R11976","pred":"ROOT","subj":"T14334","obj":"T14334"},{"id":"R11977","pred":"cc","subj":"T14335","obj":"T14334"},{"id":"R11978","pred":"nmod","subj":"T14336","obj":"T14372"},{"id":"R11979","pred":"prep","subj":"T14337","obj":"T14336"},{"id":"R11980","pred":"pobj","subj":"T14338","obj":"T14337"},{"id":"R11981","pred":"aux","subj":"T14339","obj":"T14340"},{"id":"R11982","pred":"xcomp","subj":"T14340","obj":"T14336"},{"id":"R11983","pred":"det","subj":"T14341","obj":"T14342"},{"id":"R11984","pred":"dobj","subj":"T14342","obj":"T14340"},{"id":"R11985","pred":"prep","subj":"T14343","obj":"T14342"},{"id":"R11986","pred":"pobj","subj":"T14344","obj":"T14343"},{"id":"R11987","pred":"punct","subj":"T14345","obj":"T14346"},{"id":"R11988","pred":"advmod","subj":"T14346","obj":"T14348"},{"id":"R11989","pred":"punct","subj":"T14347","obj":"T14346"},{"id":"R11990","pred":"appos","subj":"T14348","obj":"T14344"},{"id":"R11991","pred":"punct","subj":"T14349","obj":"T14344"},{"id":"R11992","pred":"punct","subj":"T14350","obj":"T14344"},{"id":"R11993","pred":"conj","subj":"T14351","obj":"T14344"},{"id":"R11994","pred":"punct","subj":"T14352","obj":"T14353"},{"id":"R11995","pred":"appos","subj":"T14353","obj":"T14344"},{"id":"R11996","pred":"punct","subj":"T14354","obj":"T14353"},{"id":"R11997","pred":"appos","subj":"T14355","obj":"T14353"},{"id":"R11998","pred":"punct","subj":"T14356","obj":"T14353"},{"id":"R11999","pred":"punct","subj":"T14357","obj":"T14353"},{"id":"R12000","pred":"pobj","subj":"T14358","obj":"T14343"},{"id":"R12001","pred":"punct","subj":"T14359","obj":"T14360"},{"id":"R12002","pred":"appos","subj":"T14360","obj":"T14358"},{"id":"R12003","pred":"punct","subj":"T14361","obj":"T14358"},{"id":"R12004","pred":"appos","subj":"T14362","obj":"T14358"},{"id":"R12005","pred":"punct","subj":"T14363","obj":"T14358"},{"id":"R12006","pred":"punct","subj":"T14364","obj":"T14336"},{"id":"R12007","pred":"cc","subj":"T14365","obj":"T14336"},{"id":"R12008","pred":"conj","subj":"T14366","obj":"T14336"},{"id":"R12009","pred":"punct","subj":"T14367","obj":"T14368"},{"id":"R12010","pred":"nmod","subj":"T14368","obj":"T14372"},{"id":"R12011","pred":"punct","subj":"T14369","obj":"T14368"},{"id":"R12012","pred":"appos","subj":"T14370","obj":"T14368"},{"id":"R12013","pred":"punct","subj":"T14371","obj":"T14372"},{"id":"R12014","pred":"conj","subj":"T14372","obj":"T14334"},{"id":"R12015","pred":"punct","subj":"T14373","obj":"T14334"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"sentences","denotations":[{"id":"T14258","span":{"begin":0,"end":156},"obj":"Sentence"},{"id":"T86","span":{"begin":0,"end":156},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"events-check-again","denotations":[{"id":"T14530","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14531","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14532","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14533","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14534","span":{"begin":97,"end":104},"obj":"Protein"},{"id":"T14535","span":{"begin":112,"end":115},"obj":"Protein"},{"id":"T14536","span":{"begin":123,"end":128},"obj":"Protein"},{"id":"T14537","span":{"begin":140,"end":144},"obj":"Protein"}],"relations":[{"id":"R12159","pred":"themeOf","subj":"T14534","obj":"T14533"},{"id":"R12160","pred":"themeOf","subj":"T14535","obj":"T14532"},{"id":"R12161","pred":"themeOf","subj":"T14536","obj":"T14531"},{"id":"R12162","pred":"themeOf","subj":"T14537","obj":"T14530"}],"attributes":[{"id":"M173","pred":"Speculation","subj":"T14532","obj":"true"},{"id":"M174","pred":"Speculation","subj":"T14533","obj":"true"},{"id":"M172","pred":"Speculation","subj":"T14531","obj":"true"},{"id":"M171","pred":"Speculation","subj":"T14530","obj":"true"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T14538","span":{"begin":60,"end":63},"obj":"Protein"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T14248","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14249","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14250","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14251","span":{"begin":83,"end":93},"obj":"Transcription"},{"id":"T14252","span":{"begin":97,"end":104},"obj":"Protein"},{"id":"T14253","span":{"begin":112,"end":115},"obj":"Protein"},{"id":"T14254","span":{"begin":123,"end":128},"obj":"Protein"},{"id":"T14255","span":{"begin":140,"end":144},"obj":"Protein"}],"relations":[{"id":"R11899","pred":"themeOf","subj":"T14252","obj":"T14251"},{"id":"R11900","pred":"themeOf","subj":"T14253","obj":"T14250"},{"id":"R11901","pred":"themeOf","subj":"T14254","obj":"T14249"},{"id":"R11902","pred":"themeOf","subj":"T14255","obj":"T14248"}],"attributes":[{"id":"M162","pred":"Speculation","subj":"T14251","obj":"true"},{"id":"M160","pred":"Speculation","subj":"T14249","obj":"true"},{"id":"M161","pred":"Speculation","subj":"T14250","obj":"true"},{"id":"M159","pred":"Speculation","subj":"T14248","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T14506","span":{"begin":112,"end":115},"obj":"P05231"},{"id":"T14507","span":{"begin":123,"end":128},"obj":"P04141"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}

{"project":"test2","denotations":[{"id":"T14242","span":{"begin":71,"end":78},"obj":"Regulation"},{"id":"T14243","span":{"begin":83,"end":93},"obj":"Gene_expression"},{"id":"T14244","span":{"begin":97,"end":104},"obj":"Protein"},{"id":"T14245","span":{"begin":112,"end":115},"obj":"Protein"},{"id":"T14246","span":{"begin":123,"end":128},"obj":"Protein"},{"id":"T14247","span":{"begin":140,"end":144},"obj":"Protein"}],"relations":[{"id":"R11894","pred":"themeOf","subj":"T14243","obj":"T14242"},{"id":"R11895","pred":"themeOf","subj":"T14244","obj":"T14243"},{"id":"R11896","pred":"themeOf","subj":"T14245","obj":"T14243"},{"id":"R11897","pred":"themeOf","subj":"T14246","obj":"T14243"},{"id":"R11898","pred":"themeOf","subj":"T14247","obj":"T14243"}],"attributes":[{"id":"M157","pred":"Speculation","subj":"T14244","obj":"true"},{"id":"M158","pred":"Speculation","subj":"T14245","obj":"true"},{"id":"M156","pred":"Speculation","subj":"T14243","obj":"true"},{"id":"M155","pred":"Speculation","subj":"T14242","obj":"true"}],"text":"At 0, 1 and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the expression of Il12p40 (A,B), Il6 (C,D), Gmcsf (E,F), and Ifnb (G,H) mRNA."}