PMC:3279418 / 1227-1399 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T583","span":{"begin":0,"end":6},"obj":"JJ"},{"id":"T584","span":{"begin":7,"end":11},"obj":"NN"},{"id":"T585","span":{"begin":12,"end":15},"obj":"VB"},{"id":"T586","span":{"begin":16,"end":25},"obj":"JJ"},{"id":"T587","span":{"begin":26,"end":36},"obj":"NN"},{"id":"T588","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T589","span":{"begin":40,"end":45},"obj":"NN"},{"id":"T590","span":{"begin":46,"end":55},"obj":"NN"},{"id":"T591","span":{"begin":55,"end":56},"obj":"-COMMA-"},{"id":"T592","span":{"begin":57,"end":64},"obj":"IN"},{"id":"T593","span":{"begin":65,"end":68},"obj":"DT"},{"id":"T594","span":{"begin":69,"end":76},"obj":"NN"},{"id":"T595","span":{"begin":77,"end":78},"obj":"-LRB-"},{"id":"T596","span":{"begin":78,"end":84},"obj":"NN"},{"id":"T597","span":{"begin":84,"end":85},"obj":"-RRB-"},{"id":"T598","span":{"begin":86,"end":89},"obj":"CC"},{"id":"T599","span":{"begin":90,"end":105},"obj":"NN"},{"id":"T600","span":{"begin":106,"end":107},"obj":"-LRB-"},{"id":"T601","span":{"begin":107,"end":110},"obj":"NN"},{"id":"T602","span":{"begin":111,"end":114},"obj":"NN"},{"id":"T603","span":{"begin":115,"end":121},"obj":"NN"},{"id":"T604","span":{"begin":122,"end":130},"obj":"NN"},{"id":"T605","span":{"begin":130,"end":131},"obj":"-RRB-"},{"id":"T606","span":{"begin":132,"end":135},"obj":"CC"},{"id":"T607","span":{"begin":136,"end":140},"obj":"NN"},{"id":"T608","span":{"begin":141,"end":150},"obj":"NN"},{"id":"T609","span":{"begin":151,"end":159},"obj":"NN"},{"id":"T610","span":{"begin":160,"end":164},"obj":"VB"},{"id":"T611","span":{"begin":165,"end":171},"obj":"JJ"}],"relations":[{"id":"R501","pred":"arg1Of","subj":"T584","obj":"T583"},{"id":"R502","pred":"arg1Of","subj":"T584","obj":"T585"},{"id":"R503","pred":"arg1Of","subj":"T585","obj":"T592"},{"id":"R504","pred":"arg2Of","subj":"T587","obj":"T585"},{"id":"R505","pred":"arg1Of","subj":"T587","obj":"T586"},{"id":"R506","pred":"arg1Of","subj":"T587","obj":"T588"},{"id":"R507","pred":"arg2Of","subj":"T590","obj":"T588"},{"id":"R508","pred":"arg1Of","subj":"T590","obj":"T589"},{"id":"R509","pred":"arg1Of","subj":"T592","obj":"T591"},{"id":"R510","pred":"arg1Of","subj":"T594","obj":"T593"},{"id":"R511","pred":"arg1Of","subj":"T594","obj":"T595"},{"id":"R512","pred":"arg1Of","subj":"T594","obj":"T598"},{"id":"R513","pred":"arg2Of","subj":"T596","obj":"T595"},{"id":"R514","pred":"arg3Of","subj":"T597","obj":"T595"},{"id":"R515","pred":"arg1Of","subj":"T598","obj":"T610"},{"id":"R516","pred":"arg1Of","subj":"T598","obj":"T611"},{"id":"R517","pred":"arg1Of","subj":"T599","obj":"T600"},{"id":"R518","pred":"arg1Of","subj":"T599","obj":"T606"},{"id":"R519","pred":"arg2Of","subj":"T604","obj":"T600"},{"id":"R520","pred":"arg1Of","subj":"T604","obj":"T601"},{"id":"R521","pred":"arg1Of","subj":"T604","obj":"T602"},{"id":"R522","pred":"arg1Of","subj":"T604","obj":"T603"},{"id":"R523","pred":"arg3Of","subj":"T605","obj":"T600"},{"id":"R524","pred":"arg2Of","subj":"T606","obj":"T598"},{"id":"R525","pred":"arg2Of","subj":"T609","obj":"T606"},{"id":"R526","pred":"arg1Of","subj":"T609","obj":"T607"},{"id":"R527","pred":"arg1Of","subj":"T609","obj":"T608"},{"id":"R528","pred":"arg2Of","subj":"T610","obj":"T592"},{"id":"R529","pred":"arg2Of","subj":"T611","obj":"T610"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T309","span":{"begin":0,"end":6},"obj":"JJ"},{"id":"T310","span":{"begin":7,"end":11},"obj":"NNP"},{"id":"T311","span":{"begin":12,"end":15},"obj":"VBD"},{"id":"T312","span":{"begin":16,"end":25},"obj":"JJ"},{"id":"T313","span":{"begin":26,"end":36},"obj":"NN"},{"id":"T314","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T315","span":{"begin":40,"end":45},"obj":"JJ"},{"id":"T316","span":{"begin":46,"end":55},"obj":"VBG"},{"id":"T317","span":{"begin":55,"end":56},"obj":","},{"id":"T318","span":{"begin":57,"end":64},"obj":"IN"},{"id":"T319","span":{"begin":65,"end":68},"obj":"DT"},{"id":"T320","span":{"begin":69,"end":76},"obj":"NNP"},{"id":"T321","span":{"begin":77,"end":78},"obj":"-LRB-"},{"id":"T322","span":{"begin":78,"end":84},"obj":"NNP"},{"id":"T323","span":{"begin":84,"end":85},"obj":"-RRB-"},{"id":"T324","span":{"begin":86,"end":89},"obj":"CC"},{"id":"T325","span":{"begin":90,"end":102},"obj":"NNP"},{"id":"T326","span":{"begin":102,"end":103},"obj":"NNP"},{"id":"T327","span":{"begin":103,"end":105},"obj":"CD"},{"id":"T328","span":{"begin":106,"end":107},"obj":"-LRB-"},{"id":"T329","span":{"begin":107,"end":110},"obj":"CD"},{"id":"T330","span":{"begin":111,"end":114},"obj":"NNP"},{"id":"T331","span":{"begin":115,"end":121},"obj":"NN"},{"id":"T332","span":{"begin":122,"end":130},"obj":"VBZ"},{"id":"T333","span":{"begin":130,"end":131},"obj":"-RRB-"},{"id":"T334","span":{"begin":132,"end":135},"obj":"CC"},{"id":"T335","span":{"begin":136,"end":140},"obj":"CD"},{"id":"T336","span":{"begin":141,"end":150},"obj":"VBG"},{"id":"T337","span":{"begin":151,"end":159},"obj":"NNS"},{"id":"T338","span":{"begin":160,"end":164},"obj":"VBD"},{"id":"T339","span":{"begin":165,"end":171},"obj":"JJ"},{"id":"T340","span":{"begin":171,"end":172},"obj":"."}],"relations":[{"id":"R225","pred":"compound","subj":"T309","obj":"T310"},{"id":"R226","pred":"nsubj","subj":"T310","obj":"T311"},{"id":"R227","pred":"ROOT","subj":"T311","obj":"T311"},{"id":"R228","pred":"amod","subj":"T312","obj":"T313"},{"id":"R229","pred":"dobj","subj":"T313","obj":"T311"},{"id":"R230","pred":"prep","subj":"T314","obj":"T313"},{"id":"R231","pred":"amod","subj":"T315","obj":"T316"},{"id":"R232","pred":"pobj","subj":"T316","obj":"T314"},{"id":"R233","pred":"punct","subj":"T317","obj":"T311"},{"id":"R234","pred":"mark","subj":"T318","obj":"T338"},{"id":"R235","pred":"det","subj":"T319","obj":"T320"},{"id":"R236","pred":"nsubj","subj":"T320","obj":"T338"},{"id":"R237","pred":"punct","subj":"T321","obj":"T322"},{"id":"R238","pred":"appos","subj":"T322","obj":"T320"},{"id":"R239","pred":"punct","subj":"T323","obj":"T322"},{"id":"R240","pred":"cc","subj":"T324","obj":"T320"},{"id":"R241","pred":"compound","subj":"T325","obj":"T326"},{"id":"R242","pred":"nsubj","subj":"T326","obj":"T338"},{"id":"R243","pred":"nummod","subj":"T327","obj":"T326"},{"id":"R244","pred":"punct","subj":"T328","obj":"T332"},{"id":"R245","pred":"nummod","subj":"T329","obj":"T331"},{"id":"R246","pred":"compound","subj":"T330","obj":"T331"},{"id":"R247","pred":"nsubj","subj":"T331","obj":"T332"},{"id":"R248","pred":"parataxis","subj":"T332","obj":"T326"},{"id":"R249","pred":"punct","subj":"T333","obj":"T332"},{"id":"R250","pred":"cc","subj":"T334","obj":"T326"},{"id":"R251","pred":"nummod","subj":"T335","obj":"T337"},{"id":"R252","pred":"compound","subj":"T336","obj":"T337"},{"id":"R253","pred":"conj","subj":"T337","obj":"T326"},{"id":"R254","pred":"advcl","subj":"T338","obj":"T311"},{"id":"R255","pred":"acomp","subj":"T339","obj":"T338"},{"id":"R256","pred":"punct","subj":"T340","obj":"T311"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T707","span":{"begin":26,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T708","span":{"begin":26,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_1901224"},{"id":"T709","span":{"begin":40,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0038061"},{"id":"T710","span":{"begin":46,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T711","span":{"begin":141,"end":150},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T712","span":{"begin":78,"end":82},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T713","span":{"begin":107,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T714","span":{"begin":136,"end":140},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T715","span":{"begin":141,"end":159},"obj":"http://purl.obolibrary.org/obo/GO_0007165"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T724","span":{"begin":78,"end":82},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T725","span":{"begin":107,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T726","span":{"begin":136,"end":140},"obj":"http://purl.obolibrary.org/obo/GO_0008384"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    sentences

    {"project":"sentences","denotations":[{"id":"T115","span":{"begin":0,"end":172},"obj":"Sentence"},{"id":"T10","span":{"begin":0,"end":172},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T831","span":{"begin":90,"end":96},"obj":"Protein"},{"id":"T832","span":{"begin":97,"end":99},"obj":"Protein"},{"id":"T833","span":{"begin":100,"end":102},"obj":"Protein"},{"id":"T834","span":{"begin":103,"end":105},"obj":"Protein"},{"id":"T835","span":{"begin":136,"end":140},"obj":"Protein"},{"id":"T830","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T827","span":{"begin":69,"end":74},"obj":"Protein"},{"id":"T828","span":{"begin":75,"end":76},"obj":"Protein"},{"id":"T829","span":{"begin":78,"end":82},"obj":"Protein"}],"relations":[{"id":"R713","pred":"equivalentTo","subj":"T829","obj":"T827"},{"id":"R714","pred":"equivalentTo","subj":"T830","obj":"T828"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T888","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T889","span":{"begin":69,"end":76},"obj":"Protein"},{"id":"T890","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T891","span":{"begin":107,"end":130},"obj":"Protein"},{"id":"T892","span":{"begin":136,"end":140},"obj":"Protein"},{"id":"T893","span":{"begin":26,"end":36},"obj":"Positive_regulation"}],"relations":[{"id":"R660","pred":"themeOf","subj":"T888","obj":"T893"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T96","span":{"begin":69,"end":74},"obj":"Protein"},{"id":"T97","span":{"begin":75,"end":76},"obj":"Protein"},{"id":"T98","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T99","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T100","span":{"begin":90,"end":96},"obj":"Protein"},{"id":"T101","span":{"begin":97,"end":99},"obj":"Protein"},{"id":"T102","span":{"begin":100,"end":102},"obj":"Protein"},{"id":"T103","span":{"begin":103,"end":105},"obj":"Protein"},{"id":"T104","span":{"begin":136,"end":140},"obj":"Protein"}],"relations":[{"id":"R40","pred":"equivalentTo","subj":"T98","obj":"T96"},{"id":"R41","pred":"equivalentTo","subj":"T99","obj":"T97"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T678","span":{"begin":69,"end":74},"obj":"P28482"},{"id":"T679","span":{"begin":78,"end":82},"obj":"P27361"},{"id":"T680","span":{"begin":90,"end":96},"obj":"Q15759"},{"id":"T681","span":{"begin":107,"end":110},"obj":"P53778"},{"id":"T682","span":{"begin":107,"end":110},"obj":"Q16539"},{"id":"T683","span":{"begin":107,"end":110},"obj":"Q15759"},{"id":"T684","span":{"begin":107,"end":110},"obj":"O15264"},{"id":"T685","span":{"begin":136,"end":140},"obj":"Q9UHD2"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}

    test2

    {"project":"test2","denotations":[{"id":"T58","span":{"begin":69,"end":74},"obj":"Protein"},{"id":"T59","span":{"begin":75,"end":76},"obj":"Protein"},{"id":"T60","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T61","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T62","span":{"begin":90,"end":96},"obj":"Protein"},{"id":"T63","span":{"begin":97,"end":99},"obj":"Protein"},{"id":"T64","span":{"begin":100,"end":102},"obj":"Protein"},{"id":"T65","span":{"begin":103,"end":105},"obj":"Protein"},{"id":"T66","span":{"begin":136,"end":140},"obj":"Protein"}],"relations":[{"id":"R30","pred":"equivalentTo","subj":"T60","obj":"T58"},{"id":"R31","pred":"equivalentTo","subj":"T60","obj":"T59"},{"id":"R32","pred":"equivalentTo","subj":"T61","obj":"T59"},{"id":"R33","pred":"equivalentTo","subj":"T61","obj":"T58"}],"text":"Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact."}